RNA–Protein interactions for RNA: ENST00000504243.5

TRAPPC13-205, Transcript of trafficking protein particle complex 13, humanhuman

TSL 5

Gene TRAPPC13, Length 643 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-205ENST00000504243 TSPAN32Q96QS1 320 aa2.1□□□□□ -2.07
TRAPPC13-205ENST00000504243 LYSMD1Q96S90 227 aa2.1□□□□□ -2.07
TRAPPC13-205ENST00000504243 NMNAT3Q96T66 252 aa2.1□□□□□ -2.07
TRAPPC13-205ENST00000504243 TMEM147Q9BVK8 224 aa2.1□□□□□ -2.07
TRAPPC13-205ENST00000504243 FAIMQ9NVQ4 179 aa2.1□□□□□ -2.07
TRAPPC13-205ENST00000504243 TAAR3PQ9P1P4 343 aa2.1□□□□□ -2.07
TRAPPC13-205ENST00000504243 TRAPPC2LQ9UL33 140 aa2.1□□□□□ -2.07
TRAPPC13-205ENST00000504243 MYO9BQ13459 2157 aa2.1□□□□□ -2.07
TRAPPC13-205ENST00000504243 DSCAMO60469 2012 aa2.1□□□□□ -2.07
TRAPPC13-205ENST00000504243 ERCC6L2Q5T890 1561 aa2.1□□□□□ -2.07
TRAPPC13-205ENST00000504243 RB1CC1Q8TDY2 1594 aa2.1□□□□□ -2.07
TRAPPC13-205ENST00000504243 REREQ9P2R6 1566 aa2.1□□□□□ -2.07
TRAPPC13-205ENST00000504243 MED23Q9ULK4 1368 aa2.1□□□□□ -2.07
TRAPPC13-205ENST00000504243 ZCCHC11Q5TAX3 1644 aaKnown RBP2.09□□□□□ -2.07
TRAPPC13-205ENST00000504243 DENND4BO75064 1496 aaPredicted RBP2.09□□□□□ -2.07
TRAPPC13-205ENST00000504243 MAST2Q6P0Q8 1798 aa2.09□□□□□ -2.07
TRAPPC13-205ENST00000504243 hCG_1818297A0A087WSY0 165 aa2.09□□□□□ -2.07
TRAPPC13-205ENST00000504243 MDFIC2A0A1B0GVS7 189 aa2.09□□□□□ -2.07
TRAPPC13-205ENST00000504243 SIGLEC16A6NMB1 481 aa2.09□□□□□ -2.07
TRAPPC13-205ENST00000504243 A8MT66 165 aa2.09□□□□□ -2.07
TRAPPC13-205ENST00000504243 H3BRN7 92 aa2.09□□□□□ -2.07
TRAPPC13-205ENST00000504243 J3QRK9 145 aa2.09□□□□□ -2.07
TRAPPC13-205ENST00000504243 IFNA17P01571 189 aa2.09□□□□□ -2.07
TRAPPC13-205ENST00000504243 G6PCP35575 357 aa2.09□□□□□ -2.07
TRAPPC13-205ENST00000504243 TAS2R30P59541 319 aa2.09□□□□□ -2.07
TRAPPC13-205ENST00000504243 NCS1P62166 190 aa2.09□□□□□ -2.07
TRAPPC13-205ENST00000504243 PPP3R1P63098 170 aa2.09□□□□□ -2.07
TRAPPC13-205ENST00000504243 RHEBQ15382 184 aa2.09□□□□□ -2.07
TRAPPC13-205ENST00000504243 OR8B8Q15620 311 aa2.09□□□□□ -2.07
TRAPPC13-205ENST00000504243 MORN2Q502X0 79 aa2.09□□□□□ -2.07
TRAPPC13-205ENST00000504243 SLC22A24Q8N4F4 322 aa2.09□□□□□ -2.07
TRAPPC13-205ENST00000504243 ACBD7Q8N6N7 88 aa2.09□□□□□ -2.07
TRAPPC13-205ENST00000504243 NUP35Q8NFH5 326 aa2.09□□□□□ -2.07
TRAPPC13-205ENST00000504243 OR4E2Q8NGC2 313 aa2.09□□□□□ -2.07
TRAPPC13-205ENST00000504243 ACOT12Q8WYK0 555 aa2.09□□□□□ -2.07
TRAPPC13-205ENST00000504243 SLC7A6Q92536 515 aa2.09□□□□□ -2.07
TRAPPC13-205ENST00000504243 C14orf144Q96I85 54 aa2.09□□□□□ -2.07
TRAPPC13-205ENST00000504243 NIT2Q9NQR4 276 aa2.09□□□□□ -2.07
TRAPPC13-205ENST00000504243 NDUFB11Q9NX14 153 aa2.09□□□□□ -2.07
TRAPPC13-205ENST00000504243 U3KQ87 197 aa2.09□□□□□ -2.07
TRAPPC13-205ENST00000504243 SIPA1L1O43166 1804 aa2.09□□□□□ -2.08
TRAPPC13-205ENST00000504243 MYH10P35580 1976 aa2.09□□□□□ -2.08
TRAPPC13-205ENST00000504243 OVOS2A0A0J9YW53 1432 aa2.08□□□□□ -2.08
TRAPPC13-205ENST00000504243 OVOS2Q6IE36 1432 aa2.08□□□□□ -2.08
TRAPPC13-205ENST00000504243 MIA2Q96PC5 1412 aa2.08□□□□□ -2.08
TRAPPC13-205ENST00000504243 ATG2BQ96BY7 2078 aa2.08□□□□□ -2.08
TRAPPC13-205ENST00000504243 MUC19Q7Z5P9 8384 aa2.08□□□□□ -2.08
TRAPPC13-205ENST00000504243 A0A087WX48 190 aa2.08□□□□□ -2.08
TRAPPC13-205ENST00000504243 MEIKINA0A087WXM9 373 aa2.08□□□□□ -2.08
TRAPPC13-205ENST00000504243 TRAV5A0A0B4J249 113 aa2.08□□□□□ -2.08
TRAPPC13-205ENST00000504243 MEIS3P1A6NDR6 274 aa2.08□□□□□ -2.08
TRAPPC13-205ENST00000504243 F6UZH7 168 aa2.08□□□□□ -2.08
TRAPPC13-205ENST00000504243 GNRH2O43555 120 aa2.08□□□□□ -2.08
TRAPPC13-205ENST00000504243 RPS4Y1P22090 263 aaKnown RBP2.08□□□□□ -2.08
TRAPPC13-205ENST00000504243 S100A7P31151 101 aa2.08□□□□□ -2.08
TRAPPC13-205ENST00000504243 S100A11P31949 105 aa2.08□□□□□ -2.08
TRAPPC13-205ENST00000504243 PKIAP61925 76 aa2.08□□□□□ -2.08
TRAPPC13-205ENST00000504243 HOXC5Q00444 222 aa2.08□□□□□ -2.08
TRAPPC13-205ENST00000504243 PSG9Q00887 426 aa2.08□□□□□ -2.08
TRAPPC13-205ENST00000504243 HES1Q14469 280 aa2.08□□□□□ -2.08
TRAPPC13-205ENST00000504243 CHCHD2P9Q5T1J5 151 aaPredicted RBP2.08□□□□□ -2.08
TRAPPC13-205ENST00000504243 DEFB128Q7Z7B8 93 aa2.08□□□□□ -2.08
TRAPPC13-205ENST00000504243 GPHB5Q86YW7 130 aa2.08□□□□□ -2.08
TRAPPC13-205ENST00000504243 TCTE3Q8IZS6 198 aa2.08□□□□□ -2.08
TRAPPC13-205ENST00000504243 OR8I2Q8N0Y5 310 aa2.08□□□□□ -2.08
TRAPPC13-205ENST00000504243 TMEM86AQ8N2M4 240 aa2.08□□□□□ -2.08
TRAPPC13-205ENST00000504243 Q8NDZ9 215 aa2.08□□□□□ -2.08
TRAPPC13-205ENST00000504243 OR13C8Q8NGS7 320 aa2.08□□□□□ -2.08
TRAPPC13-205ENST00000504243 MAGOHBQ96A72 148 aaKnown RBP2.08□□□□□ -2.08
TRAPPC13-205ENST00000504243 TP53RKQ96S44 253 aa2.08□□□□□ -2.08
TRAPPC13-205ENST00000504243 SPANXDQ9BXN6 97 aa2.08□□□□□ -2.08
TRAPPC13-205ENST00000504243 LINC00470Q9BZP3 86 aa2.08□□□□□ -2.08
TRAPPC13-205ENST00000504243 IMUPQ9GZP8 106 aa2.08□□□□□ -2.08
TRAPPC13-205ENST00000504243 EFCAB1Q9HAE3 211 aa2.08□□□□□ -2.08
TRAPPC13-205ENST00000504243 TAF9BQ9HBM6 251 aa2.08□□□□□ -2.08
TRAPPC13-205ENST00000504243 TVP23BQ9NYZ1 205 aa2.08□□□□□ -2.08
TRAPPC13-205ENST00000504243 SCN10AQ9Y5Y9 1956 aa2.08□□□□□ -2.08
TRAPPC13-205ENST00000504243 NAIPQ13075 1403 aa2.08□□□□□ -2.08
TRAPPC13-205ENST00000504243 ERBINQ96RT1 1412 aa2.08□□□□□ -2.08
TRAPPC13-205ENST00000504243 UHRF1BP1LA0JNW5 1464 aa2.07□□□□□ -2.08
TRAPPC13-205ENST00000504243 SLIT2O94813 1529 aa2.07□□□□□ -2.08
TRAPPC13-205ENST00000504243 DOCK3Q8IZD9 2030 aa2.07□□□□□ -2.08
TRAPPC13-205ENST00000504243 TRBV19A0A075B6N1 114 aa2.07□□□□□ -2.08
TRAPPC13-205ENST00000504243 MUC21A0A0G2JKD1 596 aa2.07□□□□□ -2.08
TRAPPC13-205ENST00000504243 A0A0J9YY10 115 aa2.07□□□□□ -2.08
TRAPPC13-205ENST00000504243 MUC21A0A140T8X8 626 aa2.07□□□□□ -2.08
TRAPPC13-205ENST00000504243 TMEM269A0A1B0GVZ9 245 aa2.07□□□□□ -2.08
TRAPPC13-205ENST00000504243 A0A1B0GX78 115 aa2.07□□□□□ -2.08
TRAPPC13-205ENST00000504243 DUXBA0A1W2PPF3 345 aa2.07□□□□□ -2.08
TRAPPC13-205ENST00000504243 C9JCJ5 164 aa2.07□□□□□ -2.08
TRAPPC13-205ENST00000504243 PLA2G10O15496 165 aa2.07□□□□□ -2.08
TRAPPC13-205ENST00000504243 OR2H2O95918 312 aa2.07□□□□□ -2.08
TRAPPC13-205ENST00000504243 SCTP09683 121 aa2.07□□□□□ -2.08
TRAPPC13-205ENST00000504243 RPL27AP46776 148 aaKnown RBP2.07□□□□□ -2.08
TRAPPC13-205ENST00000504243 GABRA2P47869 451 aa2.07□□□□□ -2.08
TRAPPC13-205ENST00000504243 RELAQ04206 551 aa2.07□□□□□ -2.08
TRAPPC13-205ENST00000504243 SS18Q15532 418 aa2.07□□□□□ -2.08
TRAPPC13-205ENST00000504243 NEDD8Q15843 81 aa2.07□□□□□ -2.08
TRAPPC13-205ENST00000504243 C12orf74Q32Q52 190 aa2.07□□□□□ -2.08
TRAPPC13-205ENST00000504243 LGALS9BQ3B8N2 356 aa2.07□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms