RNA–Protein interactions for RNA: ENST00000502781.5

LSM6-202, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM6, Length 1,352 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-202ENST00000502781 ACY3Q96HD9 319 aa19.02■□□□□ 0.64
LSM6-202ENST00000502781 MRPL27Q9P0M9 148 aaKnown RBP19.02■□□□□ 0.64
LSM6-202ENST00000502781 PAIP2BQ9ULR5 123 aaKnown RBP19.02■□□□□ 0.64
LSM6-202ENST00000502781 SCGB2A1O75556 95 aa19.01■□□□□ 0.63
LSM6-202ENST00000502781 SIX6O95475 246 aa19.01■□□□□ 0.63
LSM6-202ENST00000502781 OXA1LQ15070 435 aa19.01■□□□□ 0.63
LSM6-202ENST00000502781 TOMM20LQ6UXN7 152 aa19.01■□□□□ 0.63
LSM6-202ENST00000502781 OR1S2Q8NGQ3 325 aa19.01■□□□□ 0.63
LSM6-202ENST00000502781 ZNF256Q9Y2P7 627 aaPredicted RBP19.01■□□□□ 0.63
LSM6-202ENST00000502781 ALG5Q9Y673 324 aa19.01■□□□□ 0.63
LSM6-202ENST00000502781 SSNA1O43805 119 aa19■□□□□ 0.63
LSM6-202ENST00000502781 OR10J1P30954 320 aa19■□□□□ 0.63
LSM6-202ENST00000502781 H2BFSP57053 126 aa19■□□□□ 0.63
LSM6-202ENST00000502781 YPEL3P61236 119 aaPredicted RBP19■□□□□ 0.63
LSM6-202ENST00000502781 RAB32Q13637 225 aa19■□□□□ 0.63
LSM6-202ENST00000502781 DEFB114Q30KQ6 69 aa19■□□□□ 0.63
LSM6-202ENST00000502781 TIGITQ495A1 244 aa19■□□□□ 0.63
LSM6-202ENST00000502781 OR2K2Q8NGT1 345 aa19■□□□□ 0.63
LSM6-202ENST00000502781 C20orf24Q9BUV8 137 aa19■□□□□ 0.63
LSM6-202ENST00000502781 NMES1Q9C002 83 aa19■□□□□ 0.63
LSM6-202ENST00000502781 ZFAND3Q9H8U3 227 aa19■□□□□ 0.63
LSM6-202ENST00000502781 TECRQ9NZ01 308 aaKnown RBP19■□□□□ 0.63
LSM6-202ENST00000502781 LSM5Q9Y4Y9 91 aaKnown RBP19■□□□□ 0.63
LSM6-202ENST00000502781 PUS1Q9Y606 427 aaKnown RBP eCLIP19■□□□□ 0.63
LSM6-202ENST00000502781 IGHV3OR16-8A0A075B7F1 116 aa18.99■□□□□ 0.63
LSM6-202ENST00000502781 SLC35E1Q96K37 410 aa18.99■□□□□ 0.63
LSM6-202ENST00000502781 WI2-2373I1.2A0A1W2PRP0 233 aa18.98■□□□□ 0.63
LSM6-202ENST00000502781 YIF1AO95070 293 aa18.98■□□□□ 0.63
LSM6-202ENST00000502781 MLXQ9UH92 298 aa18.98■□□□□ 0.63
LSM6-202ENST00000502781 IGKV1D-37A0A075B6S9 117 aa18.97■□□□□ 0.63
LSM6-202ENST00000502781 K7EIL1 84 aa18.97■□□□□ 0.63
LSM6-202ENST00000502781 CYCSP99999 105 aaKnown RBP18.97■□□□□ 0.63
LSM6-202ENST00000502781 CD300EQ496F6 205 aaPredicted RBP18.97■□□□□ 0.63
LSM6-202ENST00000502781 DYNLRB2Q8TF09 96 aa18.97■□□□□ 0.63
LSM6-202ENST00000502781 CCNKO75909 580 aa18.96■□□□□ 0.63
LSM6-202ENST00000502781 METTL15P1P0C7V9 234 aa18.96■□□□□ 0.63
LSM6-202ENST00000502781 S100A10P60903 97 aa18.96■□□□□ 0.63
LSM6-202ENST00000502781 ACOT7LQ6ZUV0 252 aa18.96■□□□□ 0.63
LSM6-202ENST00000502781 PRR25Q96S07 402 aa18.96■□□□□ 0.63
LSM6-202ENST00000502781 IGKV1OR2-108A0A075B7D4 117 aa18.95■□□□□ 0.62
LSM6-202ENST00000502781 IZUMO1RA6ND01 250 aa18.95■□□□□ 0.62
LSM6-202ENST00000502781 L7N2F9 121 aa18.95■□□□□ 0.62
LSM6-202ENST00000502781 ZNF207O43670 478 aaKnown RBP18.95■□□□□ 0.62
LSM6-202ENST00000502781 SCAF4O95104 1147 aaKnown RBP18.95■□□□□ 0.62
LSM6-202ENST00000502781 GP9P14770 177 aa18.95■□□□□ 0.62
LSM6-202ENST00000502781 VAMP2P63027 116 aa18.95■□□□□ 0.62
LSM6-202ENST00000502781 LCN12Q6JVE5 192 aa18.95■□□□□ 0.62
LSM6-202ENST00000502781 THAP8Q8NA92 274 aa18.95■□□□□ 0.62
LSM6-202ENST00000502781 GINS3Q9BRX5 216 aa18.95■□□□□ 0.62
LSM6-202ENST00000502781 MGAT4CQ9UBM8 478 aa18.95■□□□□ 0.62
LSM6-202ENST00000502781 SMPXQ9UHP9 88 aa18.95■□□□□ 0.62
LSM6-202ENST00000502781 TRAV14DV4A0A0A6YYC5 116 aa18.94■□□□□ 0.62
LSM6-202ENST00000502781 IGHV7-4-1A0A0J9YVY3 117 aa18.94■□□□□ 0.62
LSM6-202ENST00000502781 PVALBP20472 110 aaPredicted RBP18.94■□□□□ 0.62
LSM6-202ENST00000502781 OR8G2PQ6IF36 304 aa18.94■□□□□ 0.62
LSM6-202ENST00000502781 BTNL8Q6UX41 500 aa18.94■□□□□ 0.62
LSM6-202ENST00000502781 WDR89Q96FK6 387 aaPredicted RBP18.94■□□□□ 0.62
LSM6-202ENST00000502781 DEDDO75618 318 aa18.93■□□□□ 0.62
LSM6-202ENST00000502781 TOMM40O96008 361 aa18.93■□□□□ 0.62
LSM6-202ENST00000502781 DLK1P80370 383 aa18.93■□□□□ 0.62
LSM6-202ENST00000502781 OR10P1Q8NGE3 313 aa18.93■□□□□ 0.62
LSM6-202ENST00000502781 Q8WTZ3 238 aa18.93■□□□□ 0.62
LSM6-202ENST00000502781 LYRM2Q9NU23 88 aaPredicted RBP18.93■□□□□ 0.62
LSM6-202ENST00000502781 PRKDCP78527 4128 aaKnown RBP18.93■□□□□ 0.62
LSM6-202ENST00000502781 ZNF785A8K8V0 405 aa18.93■□□□□ 0.62
LSM6-202ENST00000502781 FNDC10F2Z333 226 aa18.93■□□□□ 0.62
LSM6-202ENST00000502781 ARL16Q0P5N6 197 aa18.93■□□□□ 0.62
LSM6-202ENST00000502781 TMEM61Q8N0U2 210 aa18.93■□□□□ 0.62
LSM6-202ENST00000502781 TRGV9Q99603 122 aa18.93■□□□□ 0.62
LSM6-202ENST00000502781 ZFP92A6NM28 416 aa18.92■□□□□ 0.62
LSM6-202ENST00000502781 H0YIZ8 118 aa18.92■□□□□ 0.62
LSM6-202ENST00000502781 CHEK1O14757 476 aa18.92■□□□□ 0.62
LSM6-202ENST00000502781 RD3LP0DJH9 198 aa18.92■□□□□ 0.62
LSM6-202ENST00000502781 PSG1P11464 419 aa18.92■□□□□ 0.62
LSM6-202ENST00000502781 CAV2P51636 162 aa18.92■□□□□ 0.62
LSM6-202ENST00000502781 TMEM144Q7Z5S9 345 aa18.92■□□□□ 0.62
LSM6-202ENST00000502781 PPP1R1CQ8WVI7 109 aa18.92■□□□□ 0.62
LSM6-202ENST00000502781 RHPN1-AS1Q9BWJ2 59 aa18.92■□□□□ 0.62
LSM6-202ENST00000502781 LSM4Q9Y4Z0 139 aaKnown RBP18.92■□□□□ 0.62
LSM6-202ENST00000502781 TRAV25A0A0B4J276 109 aa18.91■□□□□ 0.62
LSM6-202ENST00000502781 FAM24AA6NFZ4 105 aa18.91■□□□□ 0.62
LSM6-202ENST00000502781 CXCL3P19876 107 aa18.91■□□□□ 0.62
LSM6-202ENST00000502781 CRYBB3P26998 211 aa18.91■□□□□ 0.62
LSM6-202ENST00000502781 ZNF90Q03938 601 aa18.91■□□□□ 0.62
LSM6-202ENST00000502781 MRAPQ8TCY5 172 aa18.91■□□□□ 0.62
LSM6-202ENST00000502781 GGACTQ9BVM4 153 aa18.91■□□□□ 0.62
LSM6-202ENST00000502781 VSIRQ9H7M9 311 aa18.91■□□□□ 0.62
LSM6-202ENST00000502781 BCAP31P51572 246 aa18.9■□□□□ 0.62
LSM6-202ENST00000502781 TMEM252Q8N6L7 170 aa18.9■□□□□ 0.62
LSM6-202ENST00000502781 SELENOKQ9Y6D0 94 aa18.9■□□□□ 0.62
LSM6-202ENST00000502781 RLN2P04090 185 aa18.89■□□□□ 0.61
LSM6-202ENST00000502781 NPPCP23582 126 aa18.89■□□□□ 0.61
LSM6-202ENST00000502781 AKR1C1Q04828 323 aa18.89■□□□□ 0.61
LSM6-202ENST00000502781 OR51G1Q8NGK1 321 aa18.89■□□□□ 0.61
LSM6-202ENST00000502781 METTL26Q96S19 204 aa18.89■□□□□ 0.61
LSM6-202ENST00000502781 MED28Q9H204 178 aa18.89■□□□□ 0.61
LSM6-202ENST00000502781 OR5AC2Q9NZP5 309 aa18.89■□□□□ 0.61
LSM6-202ENST00000502781 U3KQE9 123 aa18.89■□□□□ 0.61
LSM6-202ENST00000502781 IGSF23A1L1A6 192 aa18.88■□□□□ 0.61
LSM6-202ENST00000502781 APOHP02749 345 aaPredicted RBP18.88■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms