RNA–Protein interactions for RNA: ENST00000498614.5

COL6A1-206, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL6A1, Length 2,358 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-206ENST00000498614 C18orf32Q8TCD1 76 aa13.28□□□□□ -0.28
COL6A1-206ENST00000498614 RND1Q92730 232 aa13.28□□□□□ -0.28
COL6A1-206ENST00000498614 ADTRPQ96IZ2 230 aa13.28□□□□□ -0.28
COL6A1-206ENST00000498614 CLEC7AQ9BXN2 247 aa13.28□□□□□ -0.28
COL6A1-206ENST00000498614 CT45A6P0DMU7 189 aa13.28□□□□□ -0.28
COL6A1-206ENST00000498614 CT45A5P0DMU8 189 aa13.28□□□□□ -0.28
COL6A1-206ENST00000498614 CT45A7P0DMV0 189 aa13.28□□□□□ -0.28
COL6A1-206ENST00000498614 PRCDQ00LT1 54 aa13.28□□□□□ -0.28
COL6A1-206ENST00000498614 BORCS7Q96B45 105 aa13.28□□□□□ -0.28
COL6A1-206ENST00000498614 ZNF331Q9NQX6 463 aaPredicted RBP13.28□□□□□ -0.28
COL6A1-206ENST00000498614 RPUSD1Q9UJJ7 312 aaKnown RBP13.28□□□□□ -0.28
COL6A1-206ENST00000498614 PRNDQ9UKY0 176 aa13.28□□□□□ -0.28
COL6A1-206ENST00000498614 A0A0G2JNJ9 132 aa13.27□□□□□ -0.29
COL6A1-206ENST00000498614 A0A1W2PRE2 83 aa13.27□□□□□ -0.29
COL6A1-206ENST00000498614 SRRM4A7MD48 611 aaKnown RBP13.27□□□□□ -0.29
COL6A1-206ENST00000498614 TAS2R45P59539 299 aa13.27□□□□□ -0.29
COL6A1-206ENST00000498614 GDF5OSQ5U4N7 250 aa13.27□□□□□ -0.29
COL6A1-206ENST00000498614 C19orf35Q6ZS72 473 aa13.27□□□□□ -0.29
COL6A1-206ENST00000498614 SLC25A48Q6ZT89 311 aaKnown RBP13.27□□□□□ -0.29
COL6A1-206ENST00000498614 SLC25A33Q9BSK2 321 aa13.27□□□□□ -0.29
COL6A1-206ENST00000498614 Q9UFV3 132 aa13.27□□□□□ -0.29
COL6A1-206ENST00000498614 C8orf88P0DMB2 117 aa13.27□□□□□ -0.29
COL6A1-206ENST00000498614 TNXAQ16473 311 aa13.27□□□□□ -0.29
COL6A1-206ENST00000498614 POU2AF1Q16633 256 aa13.27□□□□□ -0.29
COL6A1-206ENST00000498614 TMEM108Q6UXF1 575 aa13.27□□□□□ -0.29
COL6A1-206ENST00000498614 Q6ZVH6 145 aa13.27□□□□□ -0.29
COL6A1-206ENST00000498614 EPG5Q9HCE0 2579 aa13.26□□□□□ -0.29
COL6A1-206ENST00000498614 UPK2O00526 184 aa13.26□□□□□ -0.29
COL6A1-206ENST00000498614 TEX36Q5VZQ5 186 aa13.26□□□□□ -0.29
COL6A1-206ENST00000498614 NUP37Q8NFH4 326 aa13.26□□□□□ -0.29
COL6A1-206ENST00000498614 FAM167A-AS1Q96KT0 104 aa13.26□□□□□ -0.29
COL6A1-206ENST00000498614 SLC25A2Q9BXI2 301 aa13.26□□□□□ -0.29
COL6A1-206ENST00000498614 TNCP24821 2201 aa13.26□□□□□ -0.29
COL6A1-206ENST00000498614 TEX50A0A1B0GTY4 177 aa13.25□□□□□ -0.29
COL6A1-206ENST00000498614 KLHDC1Q8N7A1 406 aa13.25□□□□□ -0.29
COL6A1-206ENST00000498614 ZNF355PQ9NSJ1 428 aa13.25□□□□□ -0.29
COL6A1-206ENST00000498614 MRPL27Q9P0M9 148 aaKnown RBP13.25□□□□□ -0.29
COL6A1-206ENST00000498614 hADV38S2A0JD32 116 aa13.25□□□□□ -0.29
COL6A1-206ENST00000498614 CCL3L1P16619 93 aa13.25□□□□□ -0.29
COL6A1-206ENST00000498614 TSPOP30536 169 aa13.25□□□□□ -0.29
COL6A1-206ENST00000498614 HINT1P49773 126 aaPredicted RBP13.25□□□□□ -0.29
COL6A1-206ENST00000498614 MFAP2P55001 183 aa13.25□□□□□ -0.29
COL6A1-206ENST00000498614 UBE2L3P68036 154 aaKnown RBP13.25□□□□□ -0.29
COL6A1-206ENST00000498614 ADIPOQQ15848 244 aa13.25□□□□□ -0.29
COL6A1-206ENST00000498614 RTL8BQ17RB0 113 aa13.25□□□□□ -0.29
COL6A1-206ENST00000498614 GFRALQ6UXV0 394 aa13.25□□□□□ -0.29
COL6A1-206ENST00000498614 PNKDQ8N490 385 aa13.25□□□□□ -0.29
COL6A1-206ENST00000498614 OR10W1Q8NGF6 305 aa13.25□□□□□ -0.29
COL6A1-206ENST00000498614 COMMD5Q9GZQ3 224 aa13.25□□□□□ -0.29
COL6A1-206ENST00000498614 LINC00574Q9H8X3 128 aa13.25□□□□□ -0.29
COL6A1-206ENST00000498614 ZNF257Q9Y2Q1 563 aa13.25□□□□□ -0.29
COL6A1-206ENST00000498614 ZFYVE26Q68DK2 2539 aa13.25□□□□□ -0.29
COL6A1-206ENST00000498614 TMEM8BA6NDV4 472 aa13.24□□□□□ -0.29
COL6A1-206ENST00000498614 NKX6-3A6NJ46 265 aa13.24□□□□□ -0.29
COL6A1-206ENST00000498614 C16orf97H3BN30 126 aa13.24□□□□□ -0.29
COL6A1-206ENST00000498614 CCL25O15444 150 aa13.24□□□□□ -0.29
COL6A1-206ENST00000498614 RNASE2P10153 161 aaKnown RBP13.24□□□□□ -0.29
COL6A1-206ENST00000498614 MBD6Q96DN6 1003 aa13.24□□□□□ -0.29
COL6A1-206ENST00000498614 C19orf24Q9BVV8 132 aa13.24□□□□□ -0.29
COL6A1-206ENST00000498614 ROS1P08922 2347 aa13.24□□□□□ -0.29
COL6A1-206ENST00000498614 C17orf100A8MU93 164 aa13.24□□□□□ -0.29
COL6A1-206ENST00000498614 TNFRSF1AP19438 455 aa13.24□□□□□ -0.29
COL6A1-206ENST00000498614 BSPH1Q075Z2 132 aa13.24□□□□□ -0.29
COL6A1-206ENST00000498614 C2orf83Q53S99 150 aa13.24□□□□□ -0.29
COL6A1-206ENST00000498614 EBLN2Q6P2I7 272 aa13.24□□□□□ -0.29
COL6A1-206ENST00000498614 OR2T6Q8NHC8 308 aa13.24□□□□□ -0.29
COL6A1-206ENST00000498614 WIPF2Q8TF74 440 aaPredicted RBP13.24□□□□□ -0.29
COL6A1-206ENST00000498614 LINC00312Q9Y6C7 94 aa13.24□□□□□ -0.29
COL6A1-206ENST00000498614 IGSF10Q6WRI0 2623 aa13.24□□□□□ -0.29
COL6A1-206ENST00000498614 COL12A1Q99715 3063 aa13.24□□□□□ -0.29
COL6A1-206ENST00000498614 C20orf202A1L168 122 aa13.23□□□□□ -0.29
COL6A1-206ENST00000498614 PSMB11A5LHX3 300 aa13.23□□□□□ -0.29
COL6A1-206ENST00000498614 FAM181BA6NEQ2 426 aa13.23□□□□□ -0.29
COL6A1-206ENST00000498614 PRRG2O14669 202 aa13.23□□□□□ -0.29
COL6A1-206ENST00000498614 SAA1P0DJI8 122 aaPredicted RBP13.23□□□□□ -0.29
COL6A1-206ENST00000498614 PYYP10082 97 aa13.23□□□□□ -0.29
COL6A1-206ENST00000498614 GPR6P46095 362 aaPredicted RBP13.23□□□□□ -0.29
COL6A1-206ENST00000498614 KLRB1Q12918 225 aa13.23□□□□□ -0.29
COL6A1-206ENST00000498614 UNQ5815/PRO19632Q6UWF5 114 aa13.23□□□□□ -0.29
COL6A1-206ENST00000498614 NUP35Q8NFH5 326 aa13.23□□□□□ -0.29
COL6A1-206ENST00000498614 ORAOV1Q8WV07 137 aa13.23□□□□□ -0.29
COL6A1-206ENST00000498614 MRPL20Q9BYC9 149 aaKnown RBP13.23□□□□□ -0.29
COL6A1-206ENST00000498614 HSBP1O75506 76 aa13.23□□□□□ -0.29
COL6A1-206ENST00000498614 FCN3O75636 299 aa13.23□□□□□ -0.29
COL6A1-206ENST00000498614 REG1BP48304 166 aa13.23□□□□□ -0.29
COL6A1-206ENST00000498614 PCP4P48539 62 aa13.23□□□□□ -0.29
COL6A1-206ENST00000498614 RPL8P62917 257 aaKnown RBP13.23□□□□□ -0.29
COL6A1-206ENST00000498614 SSBP2P81877 361 aaPredicted RBP13.23□□□□□ -0.29
COL6A1-206ENST00000498614 CD69Q07108 199 aa13.23□□□□□ -0.29
COL6A1-206ENST00000498614 PRR31Q5SQ13 230 aa13.23□□□□□ -0.29
COL6A1-206ENST00000498614 AMMECR1Q9Y4X0 333 aaPredicted RBP13.23□□□□□ -0.29
COL6A1-206ENST00000498614 M0R2Z0 102 aa13.22□□□□□ -0.29
COL6A1-206ENST00000498614 Q56UQ5 140 aa13.22□□□□□ -0.29
COL6A1-206ENST00000498614 NUDT10Q8NFP7 164 aa13.22□□□□□ -0.29
COL6A1-206ENST00000498614 NUDT11Q96G61 164 aa13.22□□□□□ -0.29
COL6A1-206ENST00000498614 SSBP4Q9BWG4 385 aaPredicted RBP13.22□□□□□ -0.29
COL6A1-206ENST00000498614 MRPS16Q9Y3D3 137 aaKnown RBP13.22□□□□□ -0.29
COL6A1-206ENST00000498614 THBDP07204 575 aa13.22□□□□□ -0.29
COL6A1-206ENST00000498614 PTTG1IPP53801 180 aa13.22□□□□□ -0.29
COL6A1-206ENST00000498614 PMCHL1Q16048 86 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms