RNA–Protein interactions for RNA: ENST00000498259.1

SF3A1-210, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 875 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-210ENST00000498259 LCN15Q6UWW0 184 aa6.66□□□□□ -1.34
SF3A1-210ENST00000498259 JMJD8Q96S16 334 aa6.66□□□□□ -1.34
SF3A1-210ENST00000498259 HSPB9Q9BQS6 159 aa6.66□□□□□ -1.34
SF3A1-210ENST00000498259 NKX6-2Q9C056 277 aaPredicted RBP6.66□□□□□ -1.34
SF3A1-210ENST00000498259 FNDC4Q9H6D8 234 aaPredicted RBP6.66□□□□□ -1.34
SF3A1-210ENST00000498259 TMEM167BQ9NRX6 74 aa6.66□□□□□ -1.34
SF3A1-210ENST00000498259 VAX2Q9UIW0 290 aa6.66□□□□□ -1.34
SF3A1-210ENST00000498259 CDC42EP3Q9UKI2 254 aa6.66□□□□□ -1.34
SF3A1-210ENST00000498259 FUT9Q9Y231 359 aa6.66□□□□□ -1.34
SF3A1-210ENST00000498259 CENPEQ02224 2701 aa6.65□□□□□ -1.34
SF3A1-210ENST00000498259 ASH1LQ9NR48 2969 aaKnown RBP6.65□□□□□ -1.34
SF3A1-210ENST00000498259 K7EIM0 57 aa6.65□□□□□ -1.34
SF3A1-210ENST00000498259 HMGB3O15347 200 aaKnown RBP6.65□□□□□ -1.34
SF3A1-210ENST00000498259 IGHV4-59P01825 116 aa6.65□□□□□ -1.34
SF3A1-210ENST00000498259 HSPB1P04792 205 aaKnown RBP6.65□□□□□ -1.34
SF3A1-210ENST00000498259 OR5G3P0C626 314 aa6.65□□□□□ -1.34
SF3A1-210ENST00000498259 EGR2P11161 476 aaPredicted RBP6.65□□□□□ -1.34
SF3A1-210ENST00000498259 RAB9AP51151 201 aa6.65□□□□□ -1.34
SF3A1-210ENST00000498259 PLP1P60201 277 aa6.65□□□□□ -1.34
SF3A1-210ENST00000498259 MLANAQ16655 118 aa6.65□□□□□ -1.34
SF3A1-210ENST00000498259 C15orf32Q32M92 178 aa6.65□□□□□ -1.34
SF3A1-210ENST00000498259 FAM78BQ5VT40 261 aa6.65□□□□□ -1.34
SF3A1-210ENST00000498259 IQCF2Q8IXL9 164 aa6.65□□□□□ -1.34
SF3A1-210ENST00000498259 OR51G1Q8NGK1 321 aa6.65□□□□□ -1.34
SF3A1-210ENST00000498259 ZNF418Q8TF45 676 aaPredicted RBP6.65□□□□□ -1.34
SF3A1-210ENST00000498259 FANCD2OSQ96PS1 177 aa6.65□□□□□ -1.34
SF3A1-210ENST00000498259 SLC35B3Q9H1N7 401 aa6.65□□□□□ -1.34
SF3A1-210ENST00000498259 SLC25A22Q9H936 323 aa6.65□□□□□ -1.34
SF3A1-210ENST00000498259 GNG13Q9P2W3 67 aa6.65□□□□□ -1.34
SF3A1-210ENST00000498259 ARL2-SNX15V9GYD0 113 aa6.65□□□□□ -1.34
SF3A1-210ENST00000498259 APCP25054 2843 aa6.65□□□□□ -1.35
SF3A1-210ENST00000498259 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP6.65□□□□□ -1.352e-6■■□□□ 11.6
SF3A1-210ENST00000498259 PRRC2AP48634 2157 aaKnown RBP6.64□□□□□ -1.35
SF3A1-210ENST00000498259 IGKV1OR2-108A0A075B7D4 117 aa6.64□□□□□ -1.35
SF3A1-210ENST00000498259 TRBV9A0A0B4J1U6 114 aa6.64□□□□□ -1.35
SF3A1-210ENST00000498259 TMEM218A2RU14 115 aa6.64□□□□□ -1.35
SF3A1-210ENST00000498259 F8W036 122 aa6.64□□□□□ -1.35
SF3A1-210ENST00000498259 HOXA3O43365 443 aaPredicted RBP6.64□□□□□ -1.35
SF3A1-210ENST00000498259 PDE6DO43924 150 aa6.64□□□□□ -1.35
SF3A1-210ENST00000498259 OR2J3O76001 311 aa6.64□□□□□ -1.35
SF3A1-210ENST00000498259 TOMM40O96008 361 aa6.64□□□□□ -1.35
SF3A1-210ENST00000498259 TRGV3P03979 118 aa6.64□□□□□ -1.35
SF3A1-210ENST00000498259 AMY1AP04745 511 aa6.64□□□□□ -1.35
SF3A1-210ENST00000498259 CRYBA1P05813 215 aa6.64□□□□□ -1.35
SF3A1-210ENST00000498259 CD5P06127 495 aa6.64□□□□□ -1.35
SF3A1-210ENST00000498259 IGLC1P0CG04 106 aa6.64□□□□□ -1.35
SF3A1-210ENST00000498259 STAG3L2P0CL84 134 aa6.64□□□□□ -1.35
SF3A1-210ENST00000498259 STAG3L3P0CL85 134 aa6.64□□□□□ -1.35
SF3A1-210ENST00000498259 C8orf88P0DMB2 117 aa6.64□□□□□ -1.35
SF3A1-210ENST00000498259 BCL2P10415 239 aa6.64□□□□□ -1.35
SF3A1-210ENST00000498259 MFAP2P55001 183 aa6.64□□□□□ -1.35
SF3A1-210ENST00000498259 RHOGP84095 191 aa6.64□□□□□ -1.35
SF3A1-210ENST00000498259 NDPQ00604 133 aa6.64□□□□□ -1.35
SF3A1-210ENST00000498259 LCE2DQ5TA82 110 aaPredicted RBP6.64□□□□□ -1.35
SF3A1-210ENST00000498259 ASPHD1Q5U4P2 390 aa6.64□□□□□ -1.35
SF3A1-210ENST00000498259 BCL6BQ8N143 479 aaPredicted RBP6.64□□□□□ -1.35
SF3A1-210ENST00000498259 SVBPQ8N300 66 aa6.64□□□□□ -1.35
SF3A1-210ENST00000498259 CIARTQ8N365 385 aaPredicted RBP6.64□□□□□ -1.35
SF3A1-210ENST00000498259 SEC11CQ9BY50 192 aa6.64□□□□□ -1.35
SF3A1-210ENST00000498259 PLA2G2EQ9NZK7 142 aa6.64□□□□□ -1.35
SF3A1-210ENST00000498259 HIGD1AQ9Y241 93 aa6.64□□□□□ -1.35
SF3A1-210ENST00000498259 TET2Q6N021 2002 aaPredicted RBP6.64□□□□□ -1.35
SF3A1-210ENST00000498259 TNCP24821 2201 aa6.64□□□□□ -1.35
SF3A1-210ENST00000498259 MED13LQ71F56 2210 aa6.64□□□□□ -1.35
SF3A1-210ENST00000498259 CLDN34H7C241 214 aa6.63□□□□□ -1.35
SF3A1-210ENST00000498259 BMPR1BO00238 502 aa6.63□□□□□ -1.35
SF3A1-210ENST00000498259 YIF1AO95070 293 aa6.63□□□□□ -1.35
SF3A1-210ENST00000498259 NDUFB8O95169 186 aa6.63□□□□□ -1.35
SF3A1-210ENST00000498259 SRD5A1P18405 259 aa6.63□□□□□ -1.35
SF3A1-210ENST00000498259 ORM2P19652 201 aa6.63□□□□□ -1.35
SF3A1-210ENST00000498259 TPPP2P59282 170 aa6.63□□□□□ -1.35
SF3A1-210ENST00000498259 MEF2BQ02080 365 aaPredicted RBP6.63□□□□□ -1.35
SF3A1-210ENST00000498259 FAM74A3Q4VXF1 159 aa6.63□□□□□ -1.35
SF3A1-210ENST00000498259 TOR2AQ5JU69 321 aa6.63□□□□□ -1.35
SF3A1-210ENST00000498259 SOHLH1Q5JUK2 328 aa6.63□□□□□ -1.35
SF3A1-210ENST00000498259 ZNF506Q5JVG8 444 aa6.63□□□□□ -1.35
SF3A1-210ENST00000498259 TEX38Q6PEX7 206 aa6.63□□□□□ -1.35
SF3A1-210ENST00000498259 ZNF600Q6ZNG1 722 aa6.63□□□□□ -1.35
SF3A1-210ENST00000498259 OR1B1Q8NGR6 318 aa6.63□□□□□ -1.35
SF3A1-210ENST00000498259 UHRF2Q96PU4 802 aa6.63□□□□□ -1.35
SF3A1-210ENST00000498259 TCEAL7Q9BRU2 100 aa6.63□□□□□ -1.35
SF3A1-210ENST00000498259 VSIRQ9H7M9 311 aa6.63□□□□□ -1.35
SF3A1-210ENST00000498259 ABCA12Q86UK0 2595 aa6.62□□□□□ -1.35
SF3A1-210ENST00000498259 IGKV1D-37A0A075B6S9 117 aa6.62□□□□□ -1.35
SF3A1-210ENST00000498259 A0A1B0GV50 99 aa6.62□□□□□ -1.35
SF3A1-210ENST00000498259 MDFIC2A0A1B0GVS7 189 aa6.62□□□□□ -1.35
SF3A1-210ENST00000498259 F6UZH7 168 aa6.62□□□□□ -1.35
SF3A1-210ENST00000498259 G3V318 75 aa6.62□□□□□ -1.35
SF3A1-210ENST00000498259 TMEM250H0YL14 139 aa6.62□□□□□ -1.35
SF3A1-210ENST00000498259 OR7C2O60412 319 aa6.62□□□□□ -1.35
SF3A1-210ENST00000498259 SNAPINO95295 136 aa6.62□□□□□ -1.35
SF3A1-210ENST00000498259 OR2C1O95371 312 aa6.62□□□□□ -1.35
SF3A1-210ENST00000498259 IGHV3-48P01763 117 aa6.62□□□□□ -1.35
SF3A1-210ENST00000498259 PSG1P11464 419 aa6.62□□□□□ -1.35
SF3A1-210ENST00000498259 FGF8P55075 233 aaPredicted RBP6.62□□□□□ -1.35
SF3A1-210ENST00000498259 BLCAPP62952 87 aa6.62□□□□□ -1.35
SF3A1-210ENST00000498259 ZNF90Q03938 601 aa6.62□□□□□ -1.35
SF3A1-210ENST00000498259 ZNF726P1Q15940 193 aa6.62□□□□□ -1.35
SF3A1-210ENST00000498259 HAGHQ16775 308 aa6.62□□□□□ -1.35
SF3A1-210ENST00000498259 LINC00305Q7Z4B0 112 aa6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms