RNA–Protein interactions for RNA: ENST00000498212.1

HMGXB4-207, Transcript of HMG-box containing 4, humanhuman

TSL 3

Gene HMGXB4, Length 778 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-207ENST00000498212 NPY1RP25929 384 aa6.26□□□□□ -1.41
HMGXB4-207ENST00000498212 S100A5P33763 92 aa6.26□□□□□ -1.41
HMGXB4-207ENST00000498212 AP3S2P59780 193 aa6.26□□□□□ -1.41
HMGXB4-207ENST00000498212 RPL11P62913 178 aaKnown RBP6.26□□□□□ -1.41
HMGXB4-207ENST00000498212 SUPT4H1P63272 117 aaKnown RBP6.26□□□□□ -1.41
HMGXB4-207ENST00000498212 SRPXP78539 464 aa6.26□□□□□ -1.41
HMGXB4-207ENST00000498212 ZNF124Q15973 351 aa6.26□□□□□ -1.41
HMGXB4-207ENST00000498212 TIGITQ495A1 244 aa6.26□□□□□ -1.41
HMGXB4-207ENST00000498212 PYDC2Q56P42 97 aa6.26□□□□□ -1.41
HMGXB4-207ENST00000498212 ETFRF1Q6IPR1 90 aa6.26□□□□□ -1.41
HMGXB4-207ENST00000498212 LYG2Q86SG7 212 aa6.26□□□□□ -1.41
HMGXB4-207ENST00000498212 NOXA1Q86UR1 476 aa6.26□□□□□ -1.41
HMGXB4-207ENST00000498212 LGI3Q8N145 548 aa6.26□□□□□ -1.41
HMGXB4-207ENST00000498212 LILRB2Q8N423 598 aa6.26□□□□□ -1.41
HMGXB4-207ENST00000498212 TOMM5Q8N4H5 51 aa6.26□□□□□ -1.41
HMGXB4-207ENST00000498212 RNASEH2CQ8TDP1 164 aaKnown RBP6.26□□□□□ -1.41
HMGXB4-207ENST00000498212 RNF183Q96D59 192 aa6.26□□□□□ -1.41
HMGXB4-207ENST00000498212 NARS2Q96I59 477 aaKnown RBP6.26□□□□□ -1.41
HMGXB4-207ENST00000498212 METTL26Q96S19 204 aa6.26□□□□□ -1.41
HMGXB4-207ENST00000498212 MS4A6AQ9H2W1 248 aa6.26□□□□□ -1.41
HMGXB4-207ENST00000498212 SHPKQ9UHJ6 478 aa6.26□□□□□ -1.41
HMGXB4-207ENST00000498212 STARD9Q9P2P6 4700 aa6.26□□□□□ -1.41
HMGXB4-207ENST00000498212 CSMD3Q7Z407 3707 aa6.26□□□□□ -1.41
HMGXB4-207ENST00000498212 TRAV2A0A0B4J234 112 aa6.25□□□□□ -1.41
HMGXB4-207ENST00000498212 PIGBOS1A0A0B4J2F0 54 aa6.25□□□□□ -1.41
HMGXB4-207ENST00000498212 JTBO76095 146 aa6.25□□□□□ -1.41
HMGXB4-207ENST00000498212 IFNA10P01566 189 aa6.25□□□□□ -1.41
HMGXB4-207ENST00000498212 IGKV1-17P01599 117 aa6.25□□□□□ -1.41
HMGXB4-207ENST00000498212 IGLC1P0CG04 106 aa6.25□□□□□ -1.41
HMGXB4-207ENST00000498212 CRYBB3P26998 211 aa6.25□□□□□ -1.41
HMGXB4-207ENST00000498212 OR10J1P30954 320 aa6.25□□□□□ -1.41
HMGXB4-207ENST00000498212 CCR6P51684 374 aa6.25□□□□□ -1.41
HMGXB4-207ENST00000498212 RND2P52198 227 aa6.25□□□□□ -1.41
HMGXB4-207ENST00000498212 TNFRSF9Q07011 255 aa6.25□□□□□ -1.41
HMGXB4-207ENST00000498212 KLF9Q13886 244 aaPredicted RBP6.25□□□□□ -1.41
HMGXB4-207ENST00000498212 SMCO1Q147U7 214 aa6.25□□□□□ -1.41
HMGXB4-207ENST00000498212 NMSQ5H8A3 153 aa6.25□□□□□ -1.41
HMGXB4-207ENST00000498212 PRSS54Q6PEW0 395 aa6.25□□□□□ -1.41
HMGXB4-207ENST00000498212 LYZL2Q7Z4W2 148 aa6.25□□□□□ -1.41
HMGXB4-207ENST00000498212 OR1S2Q8NGQ3 325 aa6.25□□□□□ -1.41
HMGXB4-207ENST00000498212 DTD1Q8TEA8 209 aa6.25□□□□□ -1.41
HMGXB4-207ENST00000498212 TRIM63Q969Q1 353 aa6.25□□□□□ -1.41
HMGXB4-207ENST00000498212 CSTL1Q9H114 145 aa6.25□□□□□ -1.41
HMGXB4-207ENST00000498212 HSPB7Q9UBY9 170 aa6.25□□□□□ -1.41
HMGXB4-207ENST00000498212 RABAC1Q9UI14 185 aa6.25□□□□□ -1.41
HMGXB4-207ENST00000498212 V9GYH0 126 aa6.25□□□□□ -1.41
HMGXB4-207ENST00000498212 AGRNO00468 2067 aa6.24□□□□□ -1.41
HMGXB4-207ENST00000498212 DUXBA0A1W2PPF3 345 aa6.24□□□□□ -1.41
HMGXB4-207ENST00000498212 MPTX1A8MV57 137 aa6.24□□□□□ -1.41
HMGXB4-207ENST00000498212 P2RY1P47900 373 aa6.24□□□□□ -1.41
HMGXB4-207ENST00000498212 DEFB131AP59861 70 aa6.24□□□□□ -1.41
HMGXB4-207ENST00000498212 YPEL3P61236 119 aaPredicted RBP6.24□□□□□ -1.41
HMGXB4-207ENST00000498212 ZNF79Q15937 498 aa6.24□□□□□ -1.41
HMGXB4-207ENST00000498212 TMEM128Q5BJH2 165 aa6.24□□□□□ -1.41
HMGXB4-207ENST00000498212 LEMD1Q68G75 181 aa6.24□□□□□ -1.41
HMGXB4-207ENST00000498212 TMED4Q7Z7H5 227 aa6.24□□□□□ -1.41
HMGXB4-207ENST00000498212 FAM24BQ8N5W8 94 aa6.24□□□□□ -1.41
HMGXB4-207ENST00000498212 STXBP6Q8NFX7 210 aa6.24□□□□□ -1.41
HMGXB4-207ENST00000498212 OR1S1Q8NH92 325 aa6.24□□□□□ -1.41
HMGXB4-207ENST00000498212 Q8WTZ3 238 aa6.24□□□□□ -1.41
HMGXB4-207ENST00000498212 TMEM170AQ8WVE7 144 aa6.24□□□□□ -1.41
HMGXB4-207ENST00000498212 DEDD2Q8WXF8 326 aa6.24□□□□□ -1.41
HMGXB4-207ENST00000498212 NPIPB3Q92617 1050 aa6.24□□□□□ -1.41
HMGXB4-207ENST00000498212 GRAMD2BQ96HH9 432 aa6.24□□□□□ -1.41
HMGXB4-207ENST00000498212 RBKSQ9H477 322 aa6.24□□□□□ -1.41
HMGXB4-207ENST00000498212 PGPEP1Q9NXJ5 209 aa6.24□□□□□ -1.41
HMGXB4-207ENST00000498212 U3KQ87 197 aa6.24□□□□□ -1.41
HMGXB4-207ENST00000498212 TENM2Q9NT68 2774 aa6.23□□□□□ -1.41
HMGXB4-207ENST00000498212 CXorf65A6NEN9 183 aa6.23□□□□□ -1.41
HMGXB4-207ENST00000498212 K7EQG2 157 aa6.23□□□□□ -1.41
HMGXB4-207ENST00000498212 IL4P05112 153 aa6.23□□□□□ -1.41
HMGXB4-207ENST00000498212 HNRNPCP07910 306 aaKnown RBP eCLIP6.23□□□□□ -1.41
HMGXB4-207ENST00000498212 ATF4P18848 351 aaPredicted RBP6.23□□□□□ -1.41
HMGXB4-207ENST00000498212 VAMP1P23763 118 aa6.23□□□□□ -1.41
HMGXB4-207ENST00000498212 EIF2B2P49770 351 aaKnown RBP6.23□□□□□ -1.41
HMGXB4-207ENST00000498212 EWSR1Q01844 656 aaKnown RBP eCLIP6.23□□□□□ -1.41
HMGXB4-207ENST00000498212 PMS2P11Q13670 270 aa6.23□□□□□ -1.41
HMGXB4-207ENST00000498212 RBMS2Q15434 407 aaKnown RBP6.23□□□□□ -1.41
HMGXB4-207ENST00000498212 CCDC190Q86UF4 302 aa6.23□□□□□ -1.41
HMGXB4-207ENST00000498212 GATAD1Q8WUU5 269 aa6.23□□□□□ -1.41
HMGXB4-207ENST00000498212 ACY3Q96HD9 319 aa6.23□□□□□ -1.41
HMGXB4-207ENST00000498212 SLC25A21Q9BQT8 299 aaPredicted RBP6.23□□□□□ -1.41
HMGXB4-207ENST00000498212 RBM38Q9H0Z9 239 aaKnown RBP6.23□□□□□ -1.41
HMGXB4-207ENST00000498212 NUPR2A6NF83 97 aa6.22□□□□□ -1.41
HMGXB4-207ENST00000498212 ZNF701M0R085 212 aaPredicted RBP6.22□□□□□ -1.41
HMGXB4-207ENST00000498212 TOMM40O96008 361 aa6.22□□□□□ -1.41
HMGXB4-207ENST00000498212 CA1P00915 261 aaPredicted RBP6.22□□□□□ -1.41
HMGXB4-207ENST00000498212 IFNA4P05014 189 aa6.22□□□□□ -1.41
HMGXB4-207ENST00000498212 ZNF688P0C7X2 276 aa6.22□□□□□ -1.41
HMGXB4-207ENST00000498212 RD3LP0DJH9 198 aa6.22□□□□□ -1.41
HMGXB4-207ENST00000498212 AP2S1P53680 142 aaPredicted RBP6.22□□□□□ -1.41
HMGXB4-207ENST00000498212 ATP5IP56385 69 aaPredicted RBP6.22□□□□□ -1.41
HMGXB4-207ENST00000498212 USF2Q15853 346 aaPredicted RBP6.22□□□□□ -1.41
HMGXB4-207ENST00000498212 SPANXN2Q5MJ10 180 aa6.22□□□□□ -1.41
HMGXB4-207ENST00000498212 C16orf54Q6UWD8 224 aa6.22□□□□□ -1.41
HMGXB4-207ENST00000498212 STHQ8IWL8 128 aa6.22□□□□□ -1.41
HMGXB4-207ENST00000498212 CENPSQ8N2Z9 138 aa6.22□□□□□ -1.41
HMGXB4-207ENST00000498212 TMEM217Q8N7C4 229 aa6.22□□□□□ -1.41
HMGXB4-207ENST00000498212 LRTM2Q8N967 370 aa6.22□□□□□ -1.41
HMGXB4-207ENST00000498212 DCANP1Q8TF63 244 aa6.22□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms