RNA–Protein interactions for RNA: ENST00000498077.6

XRN1-214, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 5

Gene XRN1, Length 5,600 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-214ENST00000498077 GAB2Q9UQC2 676 aa1.07□□□□□ -2.24
XRN1-214ENST00000498077 Q9Y3F1 56 aa1.07□□□□□ -2.24
XRN1-214ENST00000498077 AKAP9Q99996 3911 aa1.07□□□□□ -2.24
XRN1-214ENST00000498077 RTL9Q8NET4 1388 aa1.07□□□□□ -2.24
XRN1-214ENST00000498077 TRGV10A0A0A0MS01 117 aa1.07□□□□□ -2.24
XRN1-214ENST00000498077 CPSF4LA6NMK7 179 aaKnown RBP1.07□□□□□ -2.24
XRN1-214ENST00000498077 OR2B3O76000 313 aa1.07□□□□□ -2.24
XRN1-214ENST00000498077 SPART-AS1P0CW21 52 aa1.07□□□□□ -2.24
XRN1-214ENST00000498077 SLC1A1P43005 524 aa1.07□□□□□ -2.24
XRN1-214ENST00000498077 LINC00315P59091 139 aa1.07□□□□□ -2.24
XRN1-214ENST00000498077 CXCR4P61073 352 aa1.07□□□□□ -2.24
XRN1-214ENST00000498077 RPL23P62829 140 aaKnown RBP1.07□□□□□ -2.24
XRN1-214ENST00000498077 IGFBP7Q16270 282 aa1.07□□□□□ -2.24
XRN1-214ENST00000498077 KIAA1644Q3SXP7 199 aa1.07□□□□□ -2.24
XRN1-214ENST00000498077 MORN3Q6PF18 240 aaPredicted RBP1.07□□□□□ -2.24
XRN1-214ENST00000498077 NPNTQ6UXI9 565 aa1.07□□□□□ -2.24
XRN1-214ENST00000498077 ACOT7LQ6ZUV0 252 aa1.07□□□□□ -2.24
XRN1-214ENST00000498077 TRAPPC5Q8IUR0 188 aa1.07□□□□□ -2.24
XRN1-214ENST00000498077 C4orf33Q8N1A6 199 aa1.07□□□□□ -2.24
XRN1-214ENST00000498077 DRAM1Q8N682 238 aa1.07□□□□□ -2.24
XRN1-214ENST00000498077 FER1L6-AS1Q8NA97 138 aa1.07□□□□□ -2.24
XRN1-214ENST00000498077 C1orf54Q8WWF1 131 aa1.07□□□□□ -2.24
XRN1-214ENST00000498077 NAT6Q93015 286 aa1.07□□□□□ -2.24
XRN1-214ENST00000498077 TMEM54Q969K7 222 aa1.07□□□□□ -2.24
XRN1-214ENST00000498077 PPIL3Q9H2H8 161 aaKnown RBP1.07□□□□□ -2.24
XRN1-214ENST00000498077 PI4KAP42356 2102 aa1.07□□□□□ -2.24
XRN1-214ENST00000498077 TRIOO75962 3097 aa1.07□□□□□ -2.24
XRN1-214ENST00000498077 TRBV20OR9-2A0A075B6H5 130 aa1.07□□□□□ -2.24
XRN1-214ENST00000498077 TRAV16A0A0A6YYK6 109 aaPredicted RBP1.07□□□□□ -2.24
XRN1-214ENST00000498077 IGHV1-69-2A0A0G2JMI3 117 aa1.07□□□□□ -2.24
XRN1-214ENST00000498077 TBX18O95935 607 aa1.07□□□□□ -2.24
XRN1-214ENST00000498077 IGLV1-44P01699 117 aa1.07□□□□□ -2.24
XRN1-214ENST00000498077 IGHV1-46P01743 117 aa1.07□□□□□ -2.24
XRN1-214ENST00000498077 CLDN18P56856 261 aa1.07□□□□□ -2.24
XRN1-214ENST00000498077 ATP5G2Q06055 141 aa1.07□□□□□ -2.24
XRN1-214ENST00000498077 GAGE1Q13065 139 aa1.07□□□□□ -2.24
XRN1-214ENST00000498077 OR1Q1Q15612 314 aa1.07□□□□□ -2.24
XRN1-214ENST00000498077 KPRPQ5T749 579 aaPredicted RBP1.07□□□□□ -2.24
XRN1-214ENST00000498077 C11orf72Q8NBR9 251 aa1.07□□□□□ -2.24
XRN1-214ENST00000498077 OR4K5Q8NGD3 323 aa1.07□□□□□ -2.24
XRN1-214ENST00000498077 OR51A4Q8NGJ6 313 aa1.07□□□□□ -2.24
XRN1-214ENST00000498077 OR8D4Q8NGM9 314 aa1.07□□□□□ -2.24
XRN1-214ENST00000498077 OR10G4Q8NGN3 311 aa1.07□□□□□ -2.24
XRN1-214ENST00000498077 OR10G9Q8NGN4 311 aa1.07□□□□□ -2.24
XRN1-214ENST00000498077 OR10G7Q8NGN6 311 aa1.07□□□□□ -2.24
XRN1-214ENST00000498077 GPR151Q8TDV0 419 aa1.07□□□□□ -2.24
XRN1-214ENST00000498077 MS4A4EQ96PG1 132 aa1.07□□□□□ -2.24
XRN1-214ENST00000498077 GPR174Q9BXC1 333 aa1.07□□□□□ -2.24
XRN1-214ENST00000498077 ANGPTL4Q9BY76 406 aa1.07□□□□□ -2.24
XRN1-214ENST00000498077 BOLA2Q9H3K6 86 aa1.07□□□□□ -2.24
XRN1-214ENST00000498077 NAT8BQ9UHF3 227 aa1.07□□□□□ -2.24
XRN1-214ENST00000498077 ZGRF1Q86YA3 2104 aa1.06□□□□□ -2.24
XRN1-214ENST00000498077 PRRC2CQ9Y520 2896 aaKnown RBP1.06□□□□□ -2.24
XRN1-214ENST00000498077 PTPRSQ13332 1948 aa1.06□□□□□ -2.24
XRN1-214ENST00000498077 IGHV3-49A0A0A0MS15 119 aa1.06□□□□□ -2.24
XRN1-214ENST00000498077 TMED7-TICAM2A0A0A6YYA0 188 aa1.06□□□□□ -2.24
XRN1-214ENST00000498077 A0A0D9SG42 100 aa1.06□□□□□ -2.24
XRN1-214ENST00000498077 RRHO14718 337 aa1.06□□□□□ -2.24
XRN1-214ENST00000498077 SPRY3O43610 288 aa1.06□□□□□ -2.24
XRN1-214ENST00000498077 HLA-DRB1P01911 266 aa1.06□□□□□ -2.24
XRN1-214ENST00000498077 APOC3P02656 99 aa1.06□□□□□ -2.24
XRN1-214ENST00000498077 MAS1P04201 325 aa1.06□□□□□ -2.24
XRN1-214ENST00000498077 ZNF22P17026 224 aaPredicted RBP1.06□□□□□ -2.24
XRN1-214ENST00000498077 OPRD1P41143 372 aa1.06□□□□□ -2.24
XRN1-214ENST00000498077 CRYBA4P53673 196 aa1.06□□□□□ -2.24
XRN1-214ENST00000498077 C18orf65Q6ZTR6 163 aa1.06□□□□□ -2.24
XRN1-214ENST00000498077 C9orf40Q8IXQ3 194 aa1.06□□□□□ -2.24
XRN1-214ENST00000498077 SVBPQ8N300 66 aa1.06□□□□□ -2.24
XRN1-214ENST00000498077 TPRX1Q8N7U7 411 aa1.06□□□□□ -2.24
XRN1-214ENST00000498077 OR1L4Q8NGR5 311 aa1.06□□□□□ -2.24
XRN1-214ENST00000498077 OR13D1Q8NGV5 346 aa1.06□□□□□ -2.24
XRN1-214ENST00000498077 SLC22A18Q96BI1 424 aa1.06□□□□□ -2.24
XRN1-214ENST00000498077 MALSU1Q96EH3 234 aa1.06□□□□□ -2.24
XRN1-214ENST00000498077 GPER1Q99527 375 aa1.06□□□□□ -2.24
XRN1-214ENST00000498077 LPAR4Q99677 370 aa1.06□□□□□ -2.24
XRN1-214ENST00000498077 ASCL2Q99929 193 aa1.06□□□□□ -2.24
XRN1-214ENST00000498077 NEURL2Q9BR09 285 aa1.06□□□□□ -2.24
XRN1-214ENST00000498077 TREX1Q9NSU2 369 aa1.06□□□□□ -2.24
XRN1-214ENST00000498077 MRPL35Q9NZE8 188 aaKnown RBP1.06□□□□□ -2.24
XRN1-214ENST00000498077 TSPAN16Q9UKR8 245 aa1.06□□□□□ -2.24
XRN1-214ENST00000498077 PADI3Q9ULW8 664 aa1.06□□□□□ -2.24
XRN1-214ENST00000498077 NEDD4P46934 1319 aa1.06□□□□□ -2.24
XRN1-214ENST00000498077 CELSR2Q9HCU4 2923 aa1.06□□□□□ -2.24
XRN1-214ENST00000498077 PHYHO14832 338 aa1.06□□□□□ -2.24
XRN1-214ENST00000498077 RER1O15258 196 aa1.06□□□□□ -2.24
XRN1-214ENST00000498077 PMS2P2O95744 297 aa1.06□□□□□ -2.24
XRN1-214ENST00000498077 IGHV4-34P06331 123 aa1.06□□□□□ -2.24
XRN1-214ENST00000498077 DBIP07108 87 aaKnown RBP1.06□□□□□ -2.24
XRN1-214ENST00000498077 OR2T7P0C7T2 308 aa1.06□□□□□ -2.24
XRN1-214ENST00000498077 ZNF728P0DKX0 622 aa1.06□□□□□ -2.24
XRN1-214ENST00000498077 FGF5P12034 268 aa1.06□□□□□ -2.24
XRN1-214ENST00000498077 MT3P25713 68 aa1.06□□□□□ -2.24
XRN1-214ENST00000498077 GTF2A1P52655 376 aaPredicted RBP1.06□□□□□ -2.24
XRN1-214ENST00000498077 HIST2H2ACQ16777 129 aaPredicted RBP1.06□□□□□ -2.24
XRN1-214ENST00000498077 RNASE13Q5GAN3 156 aaKnown RBP1.06□□□□□ -2.24
XRN1-214ENST00000498077 BEX5Q5H9J7 111 aa1.06□□□□□ -2.24
XRN1-214ENST00000498077 ADAMTSL2Q86TH1 951 aa1.06□□□□□ -2.24
XRN1-214ENST00000498077 KLHDC8AQ8IYD2 350 aa1.06□□□□□ -2.24
XRN1-214ENST00000498077 C3orf56Q8N813 242 aa1.06□□□□□ -2.24
XRN1-214ENST00000498077 Q8NAQ8 132 aa1.06□□□□□ -2.24
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms