RNA–Protein interactions for RNA: ENST00000498048.1

PDZRN3-212, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 5

Gene PDZRN3, Length 590 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-212ENST00000498048 CSPG4Q6UVK1 2322 aa6.38□□□□□ -1.39
PDZRN3-212ENST00000498048 NAV2Q8IVL1 2488 aa6.37□□□□□ -1.39
PDZRN3-212ENST00000498048 IGLV11-55A0A075B6I3 123 aa6.37□□□□□ -1.39
PDZRN3-212ENST00000498048 MDFIC2A0A1B0GVS7 189 aa6.37□□□□□ -1.39
PDZRN3-212ENST00000498048 SH2D7A6NKC9 451 aaPredicted RBP6.37□□□□□ -1.39
PDZRN3-212ENST00000498048 I3L2K1 104 aa6.37□□□□□ -1.39
PDZRN3-212ENST00000498048 K7EIM0 57 aa6.37□□□□□ -1.39
PDZRN3-212ENST00000498048 SCGB2A1O75556 95 aa6.37□□□□□ -1.39
PDZRN3-212ENST00000498048 FABP1P07148 127 aa6.37□□□□□ -1.39
PDZRN3-212ENST00000498048 TAS2R45P59539 299 aa6.37□□□□□ -1.39
PDZRN3-212ENST00000498048 UBE2G2P60604 165 aa6.37□□□□□ -1.39
PDZRN3-212ENST00000498048 ZNF90Q03938 601 aa6.37□□□□□ -1.39
PDZRN3-212ENST00000498048 SOHLH1Q5JUK2 328 aa6.37□□□□□ -1.39
PDZRN3-212ENST00000498048 UNQ5815/PRO19632Q6UWF5 114 aa6.37□□□□□ -1.39
PDZRN3-212ENST00000498048 PRSS57Q6UWY2 283 aa6.37□□□□□ -1.39
PDZRN3-212ENST00000498048 MIR17HGQ75NE6 70 aa6.37□□□□□ -1.39
PDZRN3-212ENST00000498048 TMEM116Q8NCL8 245 aa6.37□□□□□ -1.39
PDZRN3-212ENST00000498048 SGMS2Q8NHU3 365 aa6.37□□□□□ -1.39
PDZRN3-212ENST00000498048 NANPQ8TBE9 248 aa6.37□□□□□ -1.39
PDZRN3-212ENST00000498048 C19orf24Q9BVV8 132 aa6.37□□□□□ -1.39
PDZRN3-212ENST00000498048 MEGF9Q9H1U4 602 aa6.37□□□□□ -1.39
PDZRN3-212ENST00000498048 TECRQ9NZ01 308 aaKnown RBP6.37□□□□□ -1.39
PDZRN3-212ENST00000498048 PITPNC1Q9UKF7 332 aa6.37□□□□□ -1.39
PDZRN3-212ENST00000498048 CENPEQ02224 2701 aa6.37□□□□□ -1.39
PDZRN3-212ENST00000498048 ITPR3Q14573 2671 aa6.37□□□□□ -1.39
PDZRN3-212ENST00000498048 APCP25054 2843 aa6.36□□□□□ -1.39
PDZRN3-212ENST00000498048 ELOA3CA0A087WX78 387 aaPredicted RBP6.36□□□□□ -1.39
PDZRN3-212ENST00000498048 PSMB11A5LHX3 300 aa6.36□□□□□ -1.39
PDZRN3-212ENST00000498048 A6NDX4 124 aa6.36□□□□□ -1.39
PDZRN3-212ENST00000498048 M0R036 132 aa6.36□□□□□ -1.39
PDZRN3-212ENST00000498048 EREGO14944 169 aa6.36□□□□□ -1.39
PDZRN3-212ENST00000498048 OR7C2O60412 319 aa6.36□□□□□ -1.39
PDZRN3-212ENST00000498048 PAGE4O60829 102 aa6.36□□□□□ -1.39
PDZRN3-212ENST00000498048 IGLC1P0CG04 106 aa6.36□□□□□ -1.39
PDZRN3-212ENST00000498048 HIST1H1BP16401 226 aaKnown RBP6.36□□□□□ -1.39
PDZRN3-212ENST00000498048 GCHFRP30047 84 aa6.36□□□□□ -1.39
PDZRN3-212ENST00000498048 NPBWR1P48145 328 aa6.36□□□□□ -1.39
PDZRN3-212ENST00000498048 LYZP61626 148 aa6.36□□□□□ -1.39
PDZRN3-212ENST00000498048 UBE2L3P68036 154 aaKnown RBP6.36□□□□□ -1.39
PDZRN3-212ENST00000498048 PMS2P11Q13670 270 aa6.36□□□□□ -1.39
PDZRN3-212ENST00000498048 AKIRIN2Q53H80 203 aa6.36□□□□□ -1.39
PDZRN3-212ENST00000498048 AWAT1Q58HT5 328 aa6.36□□□□□ -1.39
PDZRN3-212ENST00000498048 C9orf152Q5JTZ5 239 aa6.36□□□□□ -1.39
PDZRN3-212ENST00000498048 C10orf113Q5VZT2 155 aa6.36□□□□□ -1.39
PDZRN3-212ENST00000498048 ATRAIDQ6UW56 229 aa6.36□□□□□ -1.39
PDZRN3-212ENST00000498048 C16orf82Q7Z2V1 217 aa6.36□□□□□ -1.39
PDZRN3-212ENST00000498048 SLC35E3Q7Z769 313 aa6.36□□□□□ -1.39
PDZRN3-212ENST00000498048 TTC9CQ8N5M4 171 aa6.36□□□□□ -1.39
PDZRN3-212ENST00000498048 OR4F5Q8NH21 305 aa6.36□□□□□ -1.39
PDZRN3-212ENST00000498048 OR4X1Q8NH49 305 aa6.36□□□□□ -1.39
PDZRN3-212ENST00000498048 GATAD1Q8WUU5 269 aa6.36□□□□□ -1.39
PDZRN3-212ENST00000498048 OR4F4Q96R69 305 aa6.36□□□□□ -1.39
PDZRN3-212ENST00000498048 SEPSECSQ9HD40 501 aaKnown RBP6.36□□□□□ -1.39
PDZRN3-212ENST00000498048 ASH1LQ9NR48 2969 aaKnown RBP6.36□□□□□ -1.39
PDZRN3-212ENST00000498048 THYN1Q9P016 225 aa6.36□□□□□ -1.39
PDZRN3-212ENST00000498048 SOX21Q9Y651 276 aaPredicted RBP6.36□□□□□ -1.39
PDZRN3-212ENST00000498048 CELSR2Q9HCU4 2923 aa6.36□□□□□ -1.39
PDZRN3-212ENST00000498048 HELZ2Q9BYK8 2649 aaKnown RBP6.35□□□□□ -1.39
PDZRN3-212ENST00000498048 C11orf94C9JXX5 98 aa6.35□□□□□ -1.39
PDZRN3-212ENST00000498048 M0QZK8 103 aa6.35□□□□□ -1.39
PDZRN3-212ENST00000498048 WIPF1O43516 503 aa6.35□□□□□ -1.39
PDZRN3-212ENST00000498048 GNG7O60262 68 aa6.35□□□□□ -1.39
PDZRN3-212ENST00000498048 CLN5O75503 358 aa6.35□□□□□ -1.39
PDZRN3-212ENST00000498048 OR2J3O76001 311 aa6.35□□□□□ -1.39
PDZRN3-212ENST00000498048 FSHBP01225 129 aa6.35□□□□□ -1.39
PDZRN3-212ENST00000498048 C8orf88P0DMB2 117 aa6.35□□□□□ -1.39
PDZRN3-212ENST00000498048 ATP5G3P48201 142 aa6.35□□□□□ -1.39
PDZRN3-212ENST00000498048 KIAA0141Q14154 515 aaPredicted RBP6.35□□□□□ -1.39
PDZRN3-212ENST00000498048 TIGITQ495A1 244 aa6.35□□□□□ -1.39
PDZRN3-212ENST00000498048 Q56UQ5 140 aa6.35□□□□□ -1.39
PDZRN3-212ENST00000498048 CST9LP1Q5W188 147 aa6.35□□□□□ -1.39
PDZRN3-212ENST00000498048 FAM90A2PQ658T7 463 aa6.35□□□□□ -1.39
PDZRN3-212ENST00000498048 PQLC2Q6ZP29 291 aa6.35□□□□□ -1.39
PDZRN3-212ENST00000498048 CLRN3Q8NCR9 226 aa6.35□□□□□ -1.39
PDZRN3-212ENST00000498048 OR5T1Q8NG75 326 aa6.35□□□□□ -1.39
PDZRN3-212ENST00000498048 OR5AU1Q8NGC0 362 aa6.35□□□□□ -1.39
PDZRN3-212ENST00000498048 OR1B1Q8NGR6 318 aa6.35□□□□□ -1.39
PDZRN3-212ENST00000498048 PIFOQ8TCI5 191 aa6.35□□□□□ -1.39
PDZRN3-212ENST00000498048 ZNF48Q96MX3 618 aaPredicted RBP6.35□□□□□ -1.39
PDZRN3-212ENST00000498048 FANCD2OSQ96PS1 177 aa6.35□□□□□ -1.39
PDZRN3-212ENST00000498048 NIPSNAP3BQ9BS92 247 aa6.35□□□□□ -1.39
PDZRN3-212ENST00000498048 GSX1Q9H4S2 264 aaPredicted RBP6.35□□□□□ -1.39
PDZRN3-212ENST00000498048 TMEM167BQ9NRX6 74 aa6.35□□□□□ -1.39
PDZRN3-212ENST00000498048 ZNF355PQ9NSJ1 428 aa6.35□□□□□ -1.39
PDZRN3-212ENST00000498048 PUS1Q9Y606 427 aaKnown RBP eCLIP6.35□□□□□ -1.39
PDZRN3-212ENST00000498048 S4R3C0 116 aa6.35□□□□□ -1.39
PDZRN3-212ENST00000498048 ARL2-SNX15V9GYD0 113 aa6.35□□□□□ -1.39
PDZRN3-212ENST00000498048 VPS13CQ709C8 3753 aa6.35□□□□□ -1.39
PDZRN3-212ENST00000498048 ADARB2-AS1A8MUL3 147 aa6.34□□□□□ -1.39
PDZRN3-212ENST00000498048 F6UZH7 168 aa6.34□□□□□ -1.39
PDZRN3-212ENST00000498048 TMEM250H0YL14 139 aa6.34□□□□□ -1.39
PDZRN3-212ENST00000498048 NDUFS6O75380 124 aaKnown RBP6.34□□□□□ -1.39
PDZRN3-212ENST00000498048 TOMM40O96008 361 aa6.34□□□□□ -1.39
PDZRN3-212ENST00000498048 GHRHP01286 108 aa6.34□□□□□ -1.39
PDZRN3-212ENST00000498048 EGR2P11161 476 aaPredicted RBP6.34□□□□□ -1.39
PDZRN3-212ENST00000498048 CRIP2P52943 208 aaPredicted RBP6.34□□□□□ -1.39
PDZRN3-212ENST00000498048 MFAP4P55083 255 aa6.34□□□□□ -1.39
PDZRN3-212ENST00000498048 CD81P60033 236 aa6.34□□□□□ -1.39
PDZRN3-212ENST00000498048 BTN1A1Q13410 526 aa6.34□□□□□ -1.39
PDZRN3-212ENST00000498048 RHEBQ15382 184 aa6.34□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms