RNA–Protein interactions for RNA: ENST00000497960.5

NUP50-219, Transcript of nucleoporin 50, humanhuman

TSL 2

Gene NUP50, Length 986 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-219ENST00000497960 RNASEH2CQ8TDP1 164 aaKnown RBP11.57□□□□□ -0.56
NUP50-219ENST00000497960 RAB40CQ96S21 281 aa11.57□□□□□ -0.56
NUP50-219ENST00000497960 NEURL2Q9BR09 285 aa11.57□□□□□ -0.56
NUP50-219ENST00000497960 NMES1Q9C002 83 aa11.57□□□□□ -0.56
NUP50-219ENST00000497960 GAR1Q9NY12 217 aaKnown RBP11.57□□□□□ -0.56
NUP50-219ENST00000497960 STRAPQ9Y3F4 350 aaKnown RBP11.57□□□□□ -0.56
NUP50-219ENST00000497960 C15orf62A8K5M9 175 aa11.56□□□□□ -0.56
NUP50-219ENST00000497960 I3L2K1 104 aa11.56□□□□□ -0.56
NUP50-219ENST00000497960 H2BFSP57053 126 aa11.56□□□□□ -0.56
NUP50-219ENST00000497960 RRAS2P62070 204 aaPredicted RBP11.56□□□□□ -0.56
NUP50-219ENST00000497960 PVRIGQ6DKI7 326 aa11.56□□□□□ -0.56
NUP50-219ENST00000497960 TMEM170AQ8WVE7 144 aa11.56□□□□□ -0.56
NUP50-219ENST00000497960 ZNF436Q9C0F3 470 aaPredicted RBP11.56□□□□□ -0.56
NUP50-219ENST00000497960 MRPL27Q9P0M9 148 aaKnown RBP11.56□□□□□ -0.56
NUP50-219ENST00000497960 IGHV3-48P01763 117 aa11.55□□□□□ -0.56
NUP50-219ENST00000497960 BCAP31P51572 246 aa11.55□□□□□ -0.56
NUP50-219ENST00000497960 MFAP4P55083 255 aa11.55□□□□□ -0.56
NUP50-219ENST00000497960 ATP5IP56385 69 aaPredicted RBP11.55□□□□□ -0.56
NUP50-219ENST00000497960 SLC16A13Q7RTY0 426 aa11.55□□□□□ -0.56
NUP50-219ENST00000497960 TMEM61Q8N0U2 210 aa11.55□□□□□ -0.56
NUP50-219ENST00000497960 TMEM190Q8WZ59 177 aa11.55□□□□□ -0.56
NUP50-219ENST00000497960 WDR89Q96FK6 387 aaPredicted RBP11.55□□□□□ -0.56
NUP50-219ENST00000497960 MLXQ9UH92 298 aa11.55□□□□□ -0.56
NUP50-219ENST00000497960 TENM3Q9P273 2699 aa11.55□□□□□ -0.56
NUP50-219ENST00000497960 NDUFA4O00483 81 aa11.54□□□□□ -0.56
NUP50-219ENST00000497960 NUPL2O15504 423 aaKnown RBP11.54□□□□□ -0.56
NUP50-219ENST00000497960 GNG7O60262 68 aa11.54□□□□□ -0.56
NUP50-219ENST00000497960 TSC22D2O75157 780 aa11.54□□□□□ -0.56
NUP50-219ENST00000497960 CD7P09564 240 aa11.54□□□□□ -0.56
NUP50-219ENST00000497960 PET100P0DJ07 73 aa11.54□□□□□ -0.56
NUP50-219ENST00000497960 C8orf88P0DMB2 117 aa11.54□□□□□ -0.56
NUP50-219ENST00000497960 CXCL3P19876 107 aa11.54□□□□□ -0.56
NUP50-219ENST00000497960 CAV2P51636 162 aa11.54□□□□□ -0.56
NUP50-219ENST00000497960 TAS2R30P59541 319 aa11.54□□□□□ -0.56
NUP50-219ENST00000497960 ETFRF1Q6IPR1 90 aa11.54□□□□□ -0.56
NUP50-219ENST00000497960 BTNL8Q6UX41 500 aa11.54□□□□□ -0.56
NUP50-219ENST00000497960 RBPMS2Q6ZRY4 209 aaKnown RBP11.54□□□□□ -0.56
NUP50-219ENST00000497960 OR11H7Q8NGC8 314 aa11.54□□□□□ -0.56
NUP50-219ENST00000497960 SMIM8Q96KF7 97 aa11.54□□□□□ -0.56
NUP50-219ENST00000497960 TXN2Q99757 166 aa11.54□□□□□ -0.56
NUP50-219ENST00000497960 TM2D3Q9BRN9 247 aa11.54□□□□□ -0.56
NUP50-219ENST00000497960 CHRDL1Q9BU40 450 aa11.54□□□□□ -0.56
NUP50-219ENST00000497960 C20orf24Q9BUV8 137 aa11.54□□□□□ -0.56
NUP50-219ENST00000497960 FNDC4Q9H6D8 234 aaPredicted RBP11.54□□□□□ -0.56
NUP50-219ENST00000497960 DAZ1Q9NQZ3 744 aaKnown RBP11.54□□□□□ -0.56
NUP50-219ENST00000497960 SELENOKQ9Y6D0 94 aa11.54□□□□□ -0.56
NUP50-219ENST00000497960 TRAV25A0A0B4J276 109 aa11.53□□□□□ -0.56
NUP50-219ENST00000497960 SCGB2A1O75556 95 aa11.53□□□□□ -0.56
NUP50-219ENST00000497960 DEDDO75618 318 aa11.53□□□□□ -0.56
NUP50-219ENST00000497960 SCAF4O95104 1147 aaKnown RBP11.53□□□□□ -0.56
NUP50-219ENST00000497960 TMEM50AO95807 157 aa11.53□□□□□ -0.56
NUP50-219ENST00000497960 RLN2P04090 185 aa11.53□□□□□ -0.56
NUP50-219ENST00000497960 SLC25A4P12235 298 aa11.53□□□□□ -0.56
NUP50-219ENST00000497960 NPBWR1P48145 328 aa11.53□□□□□ -0.56
NUP50-219ENST00000497960 RELQ04864 619 aaPredicted RBP11.53□□□□□ -0.56
NUP50-219ENST00000497960 IL15RAQ13261 267 aa11.53□□□□□ -0.56
NUP50-219ENST00000497960 HAGHQ16775 308 aa11.53□□□□□ -0.56
NUP50-219ENST00000497960 OR8G2PQ6IF36 304 aa11.53□□□□□ -0.56
NUP50-219ENST00000497960 PPP1R1CQ8WVI7 109 aa11.53□□□□□ -0.56
NUP50-219ENST00000497960 SLC35E1Q96K37 410 aa11.53□□□□□ -0.56
NUP50-219ENST00000497960 SPATA25Q9BR10 227 aa11.53□□□□□ -0.56
NUP50-219ENST00000497960 OR11H12B2RN74 326 aa11.52□□□□□ -0.57
NUP50-219ENST00000497960 F8W735 103 aaPredicted RBP11.52□□□□□ -0.57
NUP50-219ENST00000497960 CTSGP08311 255 aa11.52□□□□□ -0.57
NUP50-219ENST00000497960 METTL15P1P0C7V9 234 aa11.52□□□□□ -0.57
NUP50-219ENST00000497960 FCGR2BP31994 310 aaPredicted RBP11.52□□□□□ -0.57
NUP50-219ENST00000497960 ADMP35318 185 aa11.52□□□□□ -0.57
NUP50-219ENST00000497960 RND2P52198 227 aa11.52□□□□□ -0.57
NUP50-219ENST00000497960 PAX9P55771 341 aa11.52□□□□□ -0.57
NUP50-219ENST00000497960 DEFB125Q8N687 156 aa11.52□□□□□ -0.57
NUP50-219ENST00000497960 ACY3Q96HD9 319 aa11.52□□□□□ -0.57
NUP50-219ENST00000497960 C3orf84H3BNL1 204 aa11.51□□□□□ -0.57
NUP50-219ENST00000497960 K7EMT4 169 aa11.51□□□□□ -0.57
NUP50-219ENST00000497960 YIF1AO95070 293 aa11.51□□□□□ -0.57
NUP50-219ENST00000497960 GIPP09681 153 aaPredicted RBP11.51□□□□□ -0.57
NUP50-219ENST00000497960 TMEM14EPQ6UXP3 125 aa11.51□□□□□ -0.57
NUP50-219ENST00000497960 ACOT7LQ6ZUV0 252 aa11.51□□□□□ -0.57
NUP50-219ENST00000497960 C11orf1Q9H5F2 150 aa11.51□□□□□ -0.57
NUP50-219ENST00000497960 SRD5A3Q9H8P0 318 aa11.51□□□□□ -0.57
NUP50-219ENST00000497960 LYRM2Q9NU23 88 aaPredicted RBP11.51□□□□□ -0.57
NUP50-219ENST00000497960 SMCO3A2RU48 225 aa11.5□□□□□ -0.57
NUP50-219ENST00000497960 E5RGE8 158 aa11.5□□□□□ -0.57
NUP50-219ENST00000497960 CLN5O75503 358 aa11.5□□□□□ -0.57
NUP50-219ENST00000497960 CCNKO75909 580 aa11.5□□□□□ -0.57
NUP50-219ENST00000497960 MPC2O95563 127 aa11.5□□□□□ -0.57
NUP50-219ENST00000497960 MLANAQ16655 118 aa11.5□□□□□ -0.57
NUP50-219ENST00000497960 LAMTOR1Q6IAA8 161 aa11.5□□□□□ -0.57
NUP50-219ENST00000497960 PRSS54Q6PEW0 395 aa11.5□□□□□ -0.57
NUP50-219ENST00000497960 OR4X1Q8NH49 305 aa11.5□□□□□ -0.57
NUP50-219ENST00000497960 ASB13Q8WXK3 278 aa11.5□□□□□ -0.57
NUP50-219ENST00000497960 OR5AC2Q9NZP5 309 aa11.5□□□□□ -0.57
NUP50-219ENST00000497960 MRPL36Q9P0J6 103 aaKnown RBP11.5□□□□□ -0.57
NUP50-219ENST00000497960 IGHV3OR16-8A0A075B7F1 116 aa11.49□□□□□ -0.57
NUP50-219ENST00000497960 FAM24AA6NFZ4 105 aa11.49□□□□□ -0.57
NUP50-219ENST00000497960 PRSS46E5RG02 174 aa11.49□□□□□ -0.57
NUP50-219ENST00000497960 ZNF207O43670 478 aaKnown RBP11.49□□□□□ -0.57
NUP50-219ENST00000497960 GPX4P36969 197 aaPredicted RBP11.49□□□□□ -0.57
NUP50-219ENST00000497960 AKR1C1Q04828 323 aa11.49□□□□□ -0.57
NUP50-219ENST00000497960 STX12Q86Y82 276 aa11.49□□□□□ -0.57
NUP50-219ENST00000497960 OR10P1Q8NGE3 313 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms