RNA–Protein interactions for RNA: ENST00000497892.5

ERCC8-208, Transcript of ERCC excision repair 8, CSA ubiquitin ligase complex subunit, humanhuman

TSL 1 (best)

Gene ERCC8, Length 881 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC8-208ENST00000497892 MLXQ9UH92 298 aa8.49□□□□□ -1.05
ERCC8-208ENST00000497892 K7EMT4 169 aa8.48□□□□□ -1.05
ERCC8-208ENST00000497892 SYNGR2O43760 224 aa8.48□□□□□ -1.05
ERCC8-208ENST00000497892 SCGB2A1O75556 95 aa8.48□□□□□ -1.05
ERCC8-208ENST00000497892 TMEM50AO95807 157 aa8.48□□□□□ -1.05
ERCC8-208ENST00000497892 IAPPP10997 89 aa8.48□□□□□ -1.05
ERCC8-208ENST00000497892 ID3Q02535 119 aa8.48□□□□□ -1.05
ERCC8-208ENST00000497892 ETFRF1Q6IPR1 90 aa8.48□□□□□ -1.05
ERCC8-208ENST00000497892 PRSS54Q6PEW0 395 aa8.48□□□□□ -1.05
ERCC8-208ENST00000497892 BTNL8Q6UX41 500 aa8.48□□□□□ -1.05
ERCC8-208ENST00000497892 TMEM61Q8N0U2 210 aa8.48□□□□□ -1.05
ERCC8-208ENST00000497892 TMEM116Q8NCL8 245 aa8.48□□□□□ -1.05
ERCC8-208ENST00000497892 OR4D5Q8NGN0 318 aa8.48□□□□□ -1.05
ERCC8-208ENST00000497892 CIB3Q96Q77 187 aaPredicted RBP8.48□□□□□ -1.05
ERCC8-208ENST00000497892 SEC22CQ9BRL7 303 aa8.48□□□□□ -1.05
ERCC8-208ENST00000497892 C20orf24Q9BUV8 137 aa8.48□□□□□ -1.05
ERCC8-208ENST00000497892 MAGT1Q9H0U3 335 aa8.48□□□□□ -1.05
ERCC8-208ENST00000497892 IGHV3OR16-8A0A075B7F1 116 aa8.47□□□□□ -1.05
ERCC8-208ENST00000497892 TRAV30A0A087WSZ9 112 aa8.47□□□□□ -1.05
ERCC8-208ENST00000497892 YIF1AO95070 293 aa8.47□□□□□ -1.05
ERCC8-208ENST00000497892 IGKV1-17P01599 117 aa8.47□□□□□ -1.05
ERCC8-208ENST00000497892 IGLC1P0CG04 106 aa8.47□□□□□ -1.05
ERCC8-208ENST00000497892 RND2P52198 227 aa8.47□□□□□ -1.05
ERCC8-208ENST00000497892 DEFA1P59665 94 aa8.47□□□□□ -1.05
ERCC8-208ENST00000497892 DEFA3P59666 94 aa8.47□□□□□ -1.05
ERCC8-208ENST00000497892 CD69Q07108 199 aa8.47□□□□□ -1.05
ERCC8-208ENST00000497892 IAH1Q2TAA2 248 aaPredicted RBP8.47□□□□□ -1.05
ERCC8-208ENST00000497892 ZNF600Q6ZNG1 722 aa8.47□□□□□ -1.05
ERCC8-208ENST00000497892 SLC16A13Q7RTY0 426 aa8.47□□□□□ -1.05
ERCC8-208ENST00000497892 NRARPQ7Z6K4 114 aa8.47□□□□□ -1.05
ERCC8-208ENST00000497892 WFDC3Q8IUB2 231 aa8.47□□□□□ -1.05
ERCC8-208ENST00000497892 Q8N1Y9 231 aa8.47□□□□□ -1.05
ERCC8-208ENST00000497892 B9D2Q9BPU9 175 aa8.47□□□□□ -1.05
ERCC8-208ENST00000497892 SMAD5-AS1Q9Y6J3 95 aa8.47□□□□□ -1.05
ERCC8-208ENST00000497892 COL7A1Q02388 2944 aa8.47□□□□□ -1.05
ERCC8-208ENST00000497892 TMEM238LA0A1B0GVL6 79 aa8.46□□□□□ -1.06
ERCC8-208ENST00000497892 ZNF785A8K8V0 405 aa8.46□□□□□ -1.06
ERCC8-208ENST00000497892 WRBO00258 174 aa8.46□□□□□ -1.06
ERCC8-208ENST00000497892 CCSO14618 274 aa8.46□□□□□ -1.06
ERCC8-208ENST00000497892 ZNF207O43670 478 aaKnown RBP8.46□□□□□ -1.06
ERCC8-208ENST00000497892 IFNA4P05014 189 aa8.46□□□□□ -1.06
ERCC8-208ENST00000497892 IL5P05113 134 aa8.46□□□□□ -1.06
ERCC8-208ENST00000497892 NKX2-1P43699 371 aaPredicted RBP8.46□□□□□ -1.06
ERCC8-208ENST00000497892 POLR2GP62487 172 aaKnown RBP eCLIP8.46□□□□□ -1.06
ERCC8-208ENST00000497892 RAB11AP62491 216 aa8.46□□□□□ -1.06
ERCC8-208ENST00000497892 TOMM20LQ6UXN7 152 aa8.46□□□□□ -1.06
ERCC8-208ENST00000497892 GTSCR1Q86UQ5 136 aa8.46□□□□□ -1.06
ERCC8-208ENST00000497892 C12orf45Q8N5I9 185 aaPredicted RBP8.46□□□□□ -1.06
ERCC8-208ENST00000497892 ZBTB8BQ8NAP8 495 aaPredicted RBP8.46□□□□□ -1.06
ERCC8-208ENST00000497892 OR1S2Q8NGQ3 325 aa8.46□□□□□ -1.06
ERCC8-208ENST00000497892 WDR89Q96FK6 387 aaPredicted RBP8.46□□□□□ -1.06
ERCC8-208ENST00000497892 GINS3Q9BRX5 216 aa8.46□□□□□ -1.06
ERCC8-208ENST00000497892 PUS1Q9Y606 427 aaKnown RBP eCLIP8.46□□□□□ -1.06
ERCC8-208ENST00000497892 TRAV25A0A0B4J276 109 aa8.45□□□□□ -1.06
ERCC8-208ENST00000497892 IGHV7-4-1A0A0J9YVY3 117 aa8.45□□□□□ -1.06
ERCC8-208ENST00000497892 PRSS46E5RG02 174 aa8.45□□□□□ -1.06
ERCC8-208ENST00000497892 H3BP45 60 aa8.45□□□□□ -1.06
ERCC8-208ENST00000497892 SSSCA1O60232 199 aa8.45□□□□□ -1.06
ERCC8-208ENST00000497892 SCAF4O95104 1147 aaKnown RBP8.45□□□□□ -1.06
ERCC8-208ENST00000497892 OR10J1P30954 320 aa8.45□□□□□ -1.06
ERCC8-208ENST00000497892 GPX4P36969 197 aaPredicted RBP8.45□□□□□ -1.06
ERCC8-208ENST00000497892 RPP30P78346 268 aaKnown RBP8.45□□□□□ -1.06
ERCC8-208ENST00000497892 TIGITQ495A1 244 aa8.45□□□□□ -1.06
ERCC8-208ENST00000497892 NPIPB3Q92617 1050 aa8.45□□□□□ -1.06
ERCC8-208ENST00000497892 ACY3Q96HD9 319 aa8.45□□□□□ -1.06
ERCC8-208ENST00000497892 SMPXQ9UHP9 88 aa8.45□□□□□ -1.06
ERCC8-208ENST00000497892 SELENOKQ9Y6D0 94 aa8.45□□□□□ -1.06
ERCC8-208ENST00000497892 TRAV14DV4A0A0A6YYC5 116 aa8.44□□□□□ -1.06
ERCC8-208ENST00000497892 CHEK1O14757 476 aa8.44□□□□□ -1.06
ERCC8-208ENST00000497892 PRAF2O60831 178 aa8.44□□□□□ -1.06
ERCC8-208ENST00000497892 SCGB1D2O95969 90 aa8.44□□□□□ -1.06
ERCC8-208ENST00000497892 CD81P60033 236 aa8.44□□□□□ -1.06
ERCC8-208ENST00000497892 YPEL3P61236 119 aaPredicted RBP8.44□□□□□ -1.06
ERCC8-208ENST00000497892 GAMTQ14353 236 aa8.44□□□□□ -1.06
ERCC8-208ENST00000497892 GUCA2BQ16661 112 aa8.44□□□□□ -1.06
ERCC8-208ENST00000497892 SPANXN5Q5MJ07 72 aa8.44□□□□□ -1.06
ERCC8-208ENST00000497892 SLC35E1Q96K37 410 aa8.44□□□□□ -1.06
ERCC8-208ENST00000497892 MARVELD1Q9BSK0 173 aa8.44□□□□□ -1.06
ERCC8-208ENST00000497892 RHPN1-AS1Q9BWJ2 59 aa8.44□□□□□ -1.06
ERCC8-208ENST00000497892 GPN1Q9HCN4 374 aaPredicted RBP8.44□□□□□ -1.06
ERCC8-208ENST00000497892 GSKIPQ9P0R6 139 aa8.44□□□□□ -1.06
ERCC8-208ENST00000497892 RCL1Q9Y2P8 373 aaKnown RBP8.44□□□□□ -1.06
ERCC8-208ENST00000497892 STRAPQ9Y3F4 350 aaKnown RBP8.44□□□□□ -1.06
ERCC8-208ENST00000497892 DNAH9Q9NYC9 4486 aa8.43□□□□□ -1.06
ERCC8-208ENST00000497892 IGHV3-49A0A0A0MS15 119 aa8.43□□□□□ -1.06
ERCC8-208ENST00000497892 SNRPGP15A8MWD9 76 aa8.43□□□□□ -1.06
ERCC8-208ENST00000497892 A8MZ25 164 aa8.43□□□□□ -1.06
ERCC8-208ENST00000497892 INMT-MINDY4F8WBC2 141 aa8.43□□□□□ -1.06
ERCC8-208ENST00000497892 TSPAN4O14817 238 aa8.43□□□□□ -1.06
ERCC8-208ENST00000497892 MBPP02686 304 aaPredicted RBP8.43□□□□□ -1.06
ERCC8-208ENST00000497892 FRMD6-AS1P0C7T7 363 aa8.43□□□□□ -1.06
ERCC8-208ENST00000497892 IGHV4-30-4P0DP06 118 aa8.43□□□□□ -1.06
ERCC8-208ENST00000497892 PAX9P55771 341 aa8.43□□□□□ -1.06
ERCC8-208ENST00000497892 TAS2R30P59541 319 aa8.43□□□□□ -1.06
ERCC8-208ENST00000497892 RBPMS2Q6ZRY4 209 aaKnown RBP8.43□□□□□ -1.06
ERCC8-208ENST00000497892 SMIM8Q96KF7 97 aa8.43□□□□□ -1.06
ERCC8-208ENST00000497892 RAB40CQ96S21 281 aa8.43□□□□□ -1.06
ERCC8-208ENST00000497892 SPAG8Q99932 426 aaPredicted RBP8.43□□□□□ -1.06
ERCC8-208ENST00000497892 NEURL2Q9BR09 285 aa8.43□□□□□ -1.06
ERCC8-208ENST00000497892 PSENENQ9NZ42 101 aa8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 83.7 ms