RNA–Protein interactions for RNA: ENST00000497815.5

CUX1-210, Transcript of cut like homeobox 1, humanhuman

TSL 2

Gene CUX1, Length 947 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-210ENST00000497815 CACNG8Q8WXS5 425 aa9.12□□□□□ -0.95
CUX1-210ENST00000497815 ATP6V0BQ99437 205 aa9.12□□□□□ -0.95
CUX1-210ENST00000497815 ZFP92A6NM28 416 aa9.11□□□□□ -0.95
CUX1-210ENST00000497815 OVOL1O14753 267 aa9.11□□□□□ -0.95
CUX1-210ENST00000497815 SCGB2A1O75556 95 aa9.11□□□□□ -0.95
CUX1-210ENST00000497815 YIF1AO95070 293 aa9.11□□□□□ -0.95
CUX1-210ENST00000497815 DLK1P80370 383 aa9.11□□□□□ -0.95
CUX1-210ENST00000497815 NHLH2Q02577 135 aa9.11□□□□□ -0.95
CUX1-210ENST00000497815 FGL1Q08830 312 aa9.11□□□□□ -0.95
CUX1-210ENST00000497815 KLF5Q13887 457 aaPredicted RBP9.11□□□□□ -0.95
CUX1-210ENST00000497815 FAM106AQ4KMX7 169 aa9.11□□□□□ -0.95
CUX1-210ENST00000497815 TREML4Q6UXN2 200 aa9.11□□□□□ -0.95
CUX1-210ENST00000497815 C1QL4Q86Z23 238 aa9.11□□□□□ -0.95
CUX1-210ENST00000497815 LILRB2Q8N423 598 aa9.11□□□□□ -0.95
CUX1-210ENST00000497815 TMEM116Q8NCL8 245 aa9.11□□□□□ -0.95
CUX1-210ENST00000497815 SLC25A31Q9H0C2 315 aa9.11□□□□□ -0.95
CUX1-210ENST00000497815 TRAV30A0A087WSZ9 112 aa9.1□□□□□ -0.95
CUX1-210ENST00000497815 FXYD6-FXYD2A0A087WZ82 144 aa9.1□□□□□ -0.95
CUX1-210ENST00000497815 IGKV1-17P01599 117 aa9.1□□□□□ -0.95
CUX1-210ENST00000497815 IGLC1P0CG04 106 aa9.1□□□□□ -0.95
CUX1-210ENST00000497815 LYL1P12980 280 aa9.1□□□□□ -0.95
CUX1-210ENST00000497815 RPL12P30050 165 aaKnown RBP9.1□□□□□ -0.95
CUX1-210ENST00000497815 HBG1P69891 147 aa9.1□□□□□ -0.95
CUX1-210ENST00000497815 HBG2P69892 147 aa9.1□□□□□ -0.95
CUX1-210ENST00000497815 RELQ04864 619 aaPredicted RBP9.1□□□□□ -0.95
CUX1-210ENST00000497815 UNQ9165/PRO28630Q6UXU0 137 aa9.1□□□□□ -0.95
CUX1-210ENST00000497815 GPHB5Q86YW7 130 aa9.1□□□□□ -0.95
CUX1-210ENST00000497815 OR1S2Q8NGQ3 325 aa9.1□□□□□ -0.95
CUX1-210ENST00000497815 C20orf24Q9BUV8 137 aa9.1□□□□□ -0.95
CUX1-210ENST00000497815 DNHD1Q96M86 4753 aa9.1□□□□□ -0.95
CUX1-210ENST00000497815 IGKV1D-37A0A075B6S9 117 aa9.09□□□□□ -0.95
CUX1-210ENST00000497815 NDUFA4O00483 81 aa9.09□□□□□ -0.95
CUX1-210ENST00000497815 ZNF207O43670 478 aaKnown RBP9.09□□□□□ -0.95
CUX1-210ENST00000497815 SCAF4O95104 1147 aaKnown RBP9.09□□□□□ -0.95
CUX1-210ENST00000497815 IGLL1P15814 213 aa9.09□□□□□ -0.95
CUX1-210ENST00000497815 EDN2P20800 178 aa9.09□□□□□ -0.95
CUX1-210ENST00000497815 S100A11P31949 105 aa9.09□□□□□ -0.95
CUX1-210ENST00000497815 ZNF90Q03938 601 aa9.09□□□□□ -0.95
CUX1-210ENST00000497815 OR2F1Q13607 317 aa9.09□□□□□ -0.95
CUX1-210ENST00000497815 CLINT1Q14677 625 aa9.09□□□□□ -0.95
CUX1-210ENST00000497815 ZNF600Q6ZNG1 722 aa9.09□□□□□ -0.95
CUX1-210ENST00000497815 OR9G4Q8NGQ1 327 aa9.09□□□□□ -0.95
CUX1-210ENST00000497815 OR5C1Q8NGR4 320 aa9.09□□□□□ -0.95
CUX1-210ENST00000497815 RCC1LQ96I51 464 aaKnown RBP9.09□□□□□ -0.95
CUX1-210ENST00000497815 ZNF414Q96IQ9 312 aa9.09□□□□□ -0.95
CUX1-210ENST00000497815 SMIM3Q9BZL3 60 aa9.09□□□□□ -0.95
CUX1-210ENST00000497815 PUS1Q9Y606 427 aaKnown RBP eCLIP9.09□□□□□ -0.95
CUX1-210ENST00000497815 IGKV1OR2-108A0A075B7D4 117 aa9.08□□□□□ -0.96
CUX1-210ENST00000497815 UBE2L5PA0A1B0GUS4 154 aa9.08□□□□□ -0.96
CUX1-210ENST00000497815 SEC14L6B5MCN3 397 aa9.08□□□□□ -0.96
CUX1-210ENST00000497815 G3V3Q6 166 aa9.08□□□□□ -0.96
CUX1-210ENST00000497815 SAP30O75446 220 aa9.08□□□□□ -0.96
CUX1-210ENST00000497815 RD3LP0DJH9 198 aa9.08□□□□□ -0.96
CUX1-210ENST00000497815 NUP62P37198 522 aaPredicted RBP9.08□□□□□ -0.96
CUX1-210ENST00000497815 BAXQ07812 192 aa9.08□□□□□ -0.96
CUX1-210ENST00000497815 TM4SF20Q53R12 229 aa9.08□□□□□ -0.96
CUX1-210ENST00000497815 TOMM20LQ6UXN7 152 aa9.08□□□□□ -0.96
CUX1-210ENST00000497815 ZNF546Q86UE3 836 aa9.08□□□□□ -0.96
CUX1-210ENST00000497815 THAP8Q8NA92 274 aa9.08□□□□□ -0.96
CUX1-210ENST00000497815 WFDC9Q8NEX5 89 aa9.08□□□□□ -0.96
CUX1-210ENST00000497815 Q8WTZ3 238 aa9.08□□□□□ -0.96
CUX1-210ENST00000497815 TMEM190Q8WZ59 177 aa9.08□□□□□ -0.96
CUX1-210ENST00000497815 TMEM147Q9BVK8 224 aa9.08□□□□□ -0.96
CUX1-210ENST00000497815 GGACTQ9BVM4 153 aa9.08□□□□□ -0.96
CUX1-210ENST00000497815 ELOVL1Q9BW60 279 aa9.08□□□□□ -0.96
CUX1-210ENST00000497815 NPVFQ9HCQ7 196 aa9.08□□□□□ -0.96
CUX1-210ENST00000497815 UQCC1Q9NVA1 299 aa9.08□□□□□ -0.96
CUX1-210ENST00000497815 PEMTQ9UBM1 199 aa9.08□□□□□ -0.96
CUX1-210ENST00000497815 HSPB11Q9Y547 144 aa9.08□□□□□ -0.96
CUX1-210ENST00000497815 ANK2Q01484 3957 aa9.07□□□□□ -0.96
CUX1-210ENST00000497815 FNDC10F2Z333 226 aa9.07□□□□□ -0.96
CUX1-210ENST00000497815 LGALS9O00182 355 aa9.07□□□□□ -0.96
CUX1-210ENST00000497815 ARPC5O15511 151 aa9.07□□□□□ -0.96
CUX1-210ENST00000497815 TOMM40O96008 361 aa9.07□□□□□ -0.96
CUX1-210ENST00000497815 AP2S1P53680 142 aaPredicted RBP9.07□□□□□ -0.96
CUX1-210ENST00000497815 YPEL3P61236 119 aaPredicted RBP9.07□□□□□ -0.96
CUX1-210ENST00000497815 TEPPQ6URK8 271 aa9.07□□□□□ -0.96
CUX1-210ENST00000497815 REC114Q7Z4M0 266 aa9.07□□□□□ -0.96
CUX1-210ENST00000497815 TMEM144Q7Z5S9 345 aa9.07□□□□□ -0.96
CUX1-210ENST00000497815 AKAP14Q86UN6 197 aa9.07□□□□□ -0.96
CUX1-210ENST00000497815 INO80EQ8NBZ0 244 aaPredicted RBP9.07□□□□□ -0.96
CUX1-210ENST00000497815 ST6GAL2Q96JF0 529 aa9.07□□□□□ -0.96
CUX1-210ENST00000497815 TRGV9Q99603 122 aa9.07□□□□□ -0.96
CUX1-210ENST00000497815 UFC1Q9Y3C8 167 aa9.07□□□□□ -0.96
CUX1-210ENST00000497815 SELENOKQ9Y6D0 94 aa9.07□□□□□ -0.96
CUX1-210ENST00000497815 IGHV3-49A0A0A0MS15 119 aa9.06□□□□□ -0.96
CUX1-210ENST00000497815 C2orf70A6NJV1 201 aa9.06□□□□□ -0.96
CUX1-210ENST00000497815 IL4P05112 153 aa9.06□□□□□ -0.96
CUX1-210ENST00000497815 FABP1P07148 127 aa9.06□□□□□ -0.96
CUX1-210ENST00000497815 PSG1P11464 419 aa9.06□□□□□ -0.96
CUX1-210ENST00000497815 GATA2P23769 480 aaPredicted RBP9.06□□□□□ -0.96
CUX1-210ENST00000497815 ATP6V1FQ16864 119 aa9.06□□□□□ -0.96
CUX1-210ENST00000497815 VWC2Q2TAL6 325 aa9.06□□□□□ -0.96
CUX1-210ENST00000497815 OXLD1Q5BKU9 147 aa9.06□□□□□ -0.96
CUX1-210ENST00000497815 IL34Q6ZMJ4 242 aa9.06□□□□□ -0.96
CUX1-210ENST00000497815 CYP2G1PQ6ZSU1 146 aa9.06□□□□□ -0.96
CUX1-210ENST00000497815 MCRIP2Q9BUT9 160 aaKnown RBP9.06□□□□□ -0.96
CUX1-210ENST00000497815 PBDC1Q9BVG4 233 aa9.06□□□□□ -0.96
CUX1-210ENST00000497815 ZFAND3Q9H8U3 227 aa9.06□□□□□ -0.96
CUX1-210ENST00000497815 TNFSF18Q9UNG2 199 aa9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms