RNA–Protein interactions for RNA: ENST00000497539.5

SNRNP200-208, Transcript of small nuclear ribonucleoprotein U5 subunit 200, humanhuman

TSL 1 (best)

Gene SNRNP200, Length 2,666 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200-208ENST00000497539 TMEM147Q9BVK8 224 aa9.41□□□□□ -0.9
SNRNP200-208ENST00000497539 DYNLRB1Q9NP97 96 aa9.41□□□□□ -0.9
SNRNP200-208ENST00000497539 SAA2-SAA4A0A096LPE2 208 aa9.41□□□□□ -0.9
SNRNP200-208ENST00000497539 IGHV2-26A0A0B4J1V2 119 aa9.41□□□□□ -0.9
SNRNP200-208ENST00000497539 TAX1BP3O14907 124 aa9.41□□□□□ -0.9
SNRNP200-208ENST00000497539 SAA2P0DJI9 122 aaPredicted RBP9.41□□□□□ -0.9
SNRNP200-208ENST00000497539 ADMP35318 185 aa9.41□□□□□ -0.9
SNRNP200-208ENST00000497539 SRP14P37108 136 aaKnown RBP9.41□□□□□ -0.9
SNRNP200-208ENST00000497539 HINT1P49773 126 aaPredicted RBP9.41□□□□□ -0.9
SNRNP200-208ENST00000497539 DLX6P56179 175 aa9.41□□□□□ -0.9
SNRNP200-208ENST00000497539 ZNF833PQ6ZTB9 187 aa9.41□□□□□ -0.9
SNRNP200-208ENST00000497539 OR1B1Q8NGR6 318 aa9.41□□□□□ -0.9
SNRNP200-208ENST00000497539 S1PR3Q99500 378 aa9.41□□□□□ -0.9
SNRNP200-208ENST00000497539 GTSF1LQ9H1H1 148 aa9.41□□□□□ -0.9
SNRNP200-208ENST00000497539 TMEM8BA6NDV4 472 aa9.4□□□□□ -0.9
SNRNP200-208ENST00000497539 FRMD6-AS1P0C7T7 363 aa9.4□□□□□ -0.9
SNRNP200-208ENST00000497539 RPL32P62910 135 aaKnown RBP9.4□□□□□ -0.9
SNRNP200-208ENST00000497539 RPL39P5Q59GN2 51 aa9.4□□□□□ -0.9
SNRNP200-208ENST00000497539 C1orf229Q6ZS94 237 aaPredicted RBP9.4□□□□□ -0.9
SNRNP200-208ENST00000497539 DEFB108BQ8NET1 73 aa9.4□□□□□ -0.9
SNRNP200-208ENST00000497539 NEUROG1Q92886 237 aa9.4□□□□□ -0.9
SNRNP200-208ENST00000497539 FAM90A27PA6NNH2 459 aa9.4□□□□□ -0.9
SNRNP200-208ENST00000497539 FCGR3BO75015 233 aa9.4□□□□□ -0.9
SNRNP200-208ENST00000497539 TSPOP30536 169 aa9.4□□□□□ -0.9
SNRNP200-208ENST00000497539 PLP1P60201 277 aa9.4□□□□□ -0.9
SNRNP200-208ENST00000497539 LTC4SQ16873 150 aa9.4□□□□□ -0.9
SNRNP200-208ENST00000497539 AMMECR1LQ6DCA0 310 aa9.4□□□□□ -0.9
SNRNP200-208ENST00000497539 OR10X1Q8NGY0 326 aa9.4□□□□□ -0.9
SNRNP200-208ENST00000497539 CFAP47Q6ZTR5 3102 aa9.4□□□□□ -0.9
SNRNP200-208ENST00000497539 SPTBN4Q9H254 2564 aa9.4□□□□□ -0.91
SNRNP200-208ENST00000497539 TRBV20OR9-2A0A075B6H5 130 aa9.39□□□□□ -0.91
SNRNP200-208ENST00000497539 TMPRSS2O15393 492 aa9.39□□□□□ -0.91
SNRNP200-208ENST00000497539 NDUFB3O43676 98 aa9.39□□□□□ -0.91
SNRNP200-208ENST00000497539 TYMSP04818 313 aa9.39□□□□□ -0.91
SNRNP200-208ENST00000497539 OR9G9P0C7N8 305 aa9.39□□□□□ -0.91
SNRNP200-208ENST00000497539 CBLN1P23435 193 aa9.39□□□□□ -0.91
SNRNP200-208ENST00000497539 ERVK-16P61578 105 aa9.39□□□□□ -0.91
SNRNP200-208ENST00000497539 RELBQ01201 579 aa9.39□□□□□ -0.91
SNRNP200-208ENST00000497539 ZNF714Q96N38 554 aa9.39□□□□□ -0.91
SNRNP200-208ENST00000497539 PXMP4Q9Y6I8 212 aa9.39□□□□□ -0.91
SNRNP200-208ENST00000497539 F2Z2F3 143 aa9.39□□□□□ -0.91
SNRNP200-208ENST00000497539 ZNF137PP52743 207 aa9.39□□□□□ -0.91
SNRNP200-208ENST00000497539 RPL31P62899 125 aaKnown RBP9.39□□□□□ -0.91
SNRNP200-208ENST00000497539 UTF1Q5T230 341 aa9.39□□□□□ -0.91
SNRNP200-208ENST00000497539 TMEM200BQ69YZ2 307 aa9.39□□□□□ -0.91
SNRNP200-208ENST00000497539 FOXA2Q9Y261 457 aaPredicted RBP9.39□□□□□ -0.91
SNRNP200-208ENST00000497539 ACACAQ13085 2346 aa9.39□□□□□ -0.91
SNRNP200-208ENST00000497539 SLC17A3O00476 420 aa9.38□□□□□ -0.91
SNRNP200-208ENST00000497539 CNIH1O95406 144 aa9.38□□□□□ -0.91
SNRNP200-208ENST00000497539 CDKN1AP38936 164 aa9.38□□□□□ -0.91
SNRNP200-208ENST00000497539 ATP5IP56385 69 aaPredicted RBP9.38□□□□□ -0.91
SNRNP200-208ENST00000497539 TMEM155Q4W5P6 130 aa9.38□□□□□ -0.91
SNRNP200-208ENST00000497539 TM4SF20Q53R12 229 aa9.38□□□□□ -0.91
SNRNP200-208ENST00000497539 Q6ZWC4 215 aa9.38□□□□□ -0.91
SNRNP200-208ENST00000497539 LINC01560Q8TB33 94 aa9.38□□□□□ -0.91
SNRNP200-208ENST00000497539 CTSZQ9UBR2 303 aa9.38□□□□□ -0.91
SNRNP200-208ENST00000497539 CADP27708 2225 aa9.38□□□□□ -0.91
SNRNP200-208ENST00000497539 HELTA6NFD8 242 aa9.38□□□□□ -0.91
SNRNP200-208ENST00000497539 VENTXO95231 258 aa9.38□□□□□ -0.91
SNRNP200-208ENST00000497539 VDAC2P45880 294 aaPredicted RBP9.38□□□□□ -0.91
SNRNP200-208ENST00000497539 C5orf47Q569G3 176 aa9.38□□□□□ -0.91
SNRNP200-208ENST00000497539 ZCCHC24Q8N2G6 241 aaKnown RBP9.38□□□□□ -0.91
SNRNP200-208ENST00000497539 KLHDC1Q8N7A1 406 aa9.38□□□□□ -0.91
SNRNP200-208ENST00000497539 CMTM2Q8TAZ6 248 aa9.38□□□□□ -0.91
SNRNP200-208ENST00000497539 QTRT1Q9BXR0 403 aaKnown RBP9.38□□□□□ -0.91
SNRNP200-208ENST00000497539 TP53TG3Q9ULZ0 132 aa9.38□□□□□ -0.91
SNRNP200-208ENST00000497539 C15orf61A6NNL5 157 aa9.38□□□□□ -0.91
SNRNP200-208ENST00000497539 PLAUP00749 431 aa9.38□□□□□ -0.91
SNRNP200-208ENST00000497539 RBP4P02753 201 aa9.38□□□□□ -0.91
SNRNP200-208ENST00000497539 UFSP1Q6NVU6 142 aa9.38□□□□□ -0.91
SNRNP200-208ENST00000497539 MUC15Q8N387 334 aa9.38□□□□□ -0.91
SNRNP200-208ENST00000497539 VN1R17PQ8TDU5 208 aa9.38□□□□□ -0.91
SNRNP200-208ENST00000497539 TMEM14BQ9NUH8 114 aa9.38□□□□□ -0.91
SNRNP200-208ENST00000497539 SPTBN2O15020 2390 aa9.38□□□□□ -0.91
SNRNP200-208ENST00000497539 SCO2A0A1W2PP80 73 aa9.37□□□□□ -0.91
SNRNP200-208ENST00000497539 SNAI2O43623 268 aa9.37□□□□□ -0.91
SNRNP200-208ENST00000497539 SPINK4O60575 86 aa9.37□□□□□ -0.91
SNRNP200-208ENST00000497539 IGHV3-7P01780 117 aa9.37□□□□□ -0.91
SNRNP200-208ENST00000497539 LCN2P80188 198 aa9.37□□□□□ -0.91
SNRNP200-208ENST00000497539 HLA-DRB5Q30154 266 aa9.37□□□□□ -0.91
SNRNP200-208ENST00000497539 SPATA45Q537H7 98 aa9.37□□□□□ -0.91
SNRNP200-208ENST00000497539 LYPD2Q6UXB3 125 aa9.37□□□□□ -0.91
SNRNP200-208ENST00000497539 Q8N7P7 452 aa9.37□□□□□ -0.91
SNRNP200-208ENST00000497539 OCC1Q8TAD7 63 aa9.37□□□□□ -0.91
SNRNP200-208ENST00000497539 CCL17Q92583 94 aa9.37□□□□□ -0.91
SNRNP200-208ENST00000497539 HSPB9Q9BQS6 159 aa9.37□□□□□ -0.91
SNRNP200-208ENST00000497539 TPPP3Q9BW30 176 aa9.37□□□□□ -0.91
SNRNP200-208ENST00000497539 ZNF257Q9Y2Q1 563 aa9.37□□□□□ -0.91
SNRNP200-208ENST00000497539 HCFC1P51610 2035 aa9.37□□□□□ -0.91
SNRNP200-208ENST00000497539 MGAQ8IWI9 3026 aa9.37□□□□□ -0.91
SNRNP200-208ENST00000497539 C15orf62A8K5M9 175 aa9.37□□□□□ -0.91
SNRNP200-208ENST00000497539 SERF1AO75920 110 aa9.37□□□□□ -0.91
SNRNP200-208ENST00000497539 CT45A6P0DMU7 189 aa9.37□□□□□ -0.91
SNRNP200-208ENST00000497539 CT45A5P0DMU8 189 aa9.37□□□□□ -0.91
SNRNP200-208ENST00000497539 CT45A7P0DMV0 189 aa9.37□□□□□ -0.91
SNRNP200-208ENST00000497539 GRNP28799 593 aaKnown RBP9.37□□□□□ -0.91
SNRNP200-208ENST00000497539 LINC00310P59036 64 aa9.37□□□□□ -0.91
SNRNP200-208ENST00000497539 SUMO1P63165 101 aaKnown RBP9.37□□□□□ -0.91
SNRNP200-208ENST00000497539 HSD52Q0P140 79 aa9.37□□□□□ -0.91
SNRNP200-208ENST00000497539 CDSNQ15517 529 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms