RNA–Protein interactions for RNA: ENST00000496910.1

EXOSC3-208, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 217 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-208ENST00000496910 PRTFDC1Q9NRG1 225 aa2.51□□□□□ -2.01
EXOSC3-208ENST00000496910 C8orf17Q9NRJ1 99 aa2.51□□□□□ -2.01
EXOSC3-208ENST00000496910 ACER3Q9NUN7 267 aa2.51□□□□□ -2.01
EXOSC3-208ENST00000496910 DHCR7Q9UBM7 475 aaKnown RBP2.51□□□□□ -2.01
EXOSC3-208ENST00000496910 FIS1Q9Y3D6 152 aa2.51□□□□□ -2.01
EXOSC3-208ENST00000496910 HSPG2P98160 4391 aa2.51□□□□□ -2.01
EXOSC3-208ENST00000496910 IGLV1-50A0A075B6I6 118 aa2.5□□□□□ -2.01
EXOSC3-208ENST00000496910 hCG_1818297A0A087WSY0 165 aa2.5□□□□□ -2.01
EXOSC3-208ENST00000496910 A0A087WX48 190 aa2.5□□□□□ -2.01
EXOSC3-208ENST00000496910 IGHV1-45A0A0A0MS14 117 aa2.5□□□□□ -2.01
EXOSC3-208ENST00000496910 ZNF98A6NK75 572 aa2.5□□□□□ -2.01
EXOSC3-208ENST00000496910 A8MT66 165 aa2.5□□□□□ -2.01
EXOSC3-208ENST00000496910 H0YJW9 148 aa2.5□□□□□ -2.01
EXOSC3-208ENST00000496910 H7C1C5 153 aa2.5□□□□□ -2.01
EXOSC3-208ENST00000496910 OR7C2O60412 319 aa2.5□□□□□ -2.01
EXOSC3-208ENST00000496910 TNFSF15O95150 251 aa2.5□□□□□ -2.01
EXOSC3-208ENST00000496910 INSP01308 110 aa2.5□□□□□ -2.01
EXOSC3-208ENST00000496910 OPN1SWP03999 348 aa2.5□□□□□ -2.01
EXOSC3-208ENST00000496910 TLX1NBP0CAT3 122 aa2.5□□□□□ -2.01
EXOSC3-208ENST00000496910 INAFM2P0DMQ5 153 aa2.5□□□□□ -2.01
EXOSC3-208ENST00000496910 GPX2P18283 190 aa2.5□□□□□ -2.01
EXOSC3-208ENST00000496910 GABRR1P24046 479 aa2.5□□□□□ -2.01
EXOSC3-208ENST00000496910 S100A2P29034 98 aa2.5□□□□□ -2.01
EXOSC3-208ENST00000496910 OR10J1P30954 320 aa2.5□□□□□ -2.01
EXOSC3-208ENST00000496910 LHX2P50458 406 aa2.5□□□□□ -2.01
EXOSC3-208ENST00000496910 CMC4P56277 68 aaPredicted RBP2.5□□□□□ -2.01
EXOSC3-208ENST00000496910 CKS1BP61024 79 aa2.5□□□□□ -2.01
EXOSC3-208ENST00000496910 TIMM10P62072 90 aa2.5□□□□□ -2.01
EXOSC3-208ENST00000496910 LCN6P62502 163 aa2.5□□□□□ -2.01
EXOSC3-208ENST00000496910 FABP9Q0Z7S8 132 aa2.5□□□□□ -2.01
EXOSC3-208ENST00000496910 BAMBIQ13145 260 aa2.5□□□□□ -2.01
EXOSC3-208ENST00000496910 PDGFRLQ15198 375 aa2.5□□□□□ -2.01
EXOSC3-208ENST00000496910 DEFB113Q30KQ7 82 aa2.5□□□□□ -2.01
EXOSC3-208ENST00000496910 RNF212Q495C1 297 aa2.5□□□□□ -2.01
EXOSC3-208ENST00000496910 RNASE13Q5GAN3 156 aaKnown RBP2.5□□□□□ -2.01
EXOSC3-208ENST00000496910 IBA57Q5T440 356 aaKnown RBP2.5□□□□□ -2.01
EXOSC3-208ENST00000496910 TCF24Q7RTU0 167 aa2.5□□□□□ -2.01
EXOSC3-208ENST00000496910 GTSCR1Q86UQ5 136 aa2.5□□□□□ -2.01
EXOSC3-208ENST00000496910 LRP11Q86VZ4 500 aa2.5□□□□□ -2.01
EXOSC3-208ENST00000496910 SGPP2Q8IWX5 399 aa2.5□□□□□ -2.01
EXOSC3-208ENST00000496910 MKXQ8IYA7 352 aa2.5□□□□□ -2.01
EXOSC3-208ENST00000496910 C12orf45Q8N5I9 185 aaPredicted RBP2.5□□□□□ -2.01
EXOSC3-208ENST00000496910 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP2.5□□□□□ -2.01
EXOSC3-208ENST00000496910 OR5H2Q8NGV7 314 aa2.5□□□□□ -2.01
EXOSC3-208ENST00000496910 RNASE11Q8TAA1 199 aaKnown RBP2.5□□□□□ -2.01
EXOSC3-208ENST00000496910 MAL2Q969L2 176 aa2.5□□□□□ -2.01
EXOSC3-208ENST00000496910 GALMQ96C23 342 aa2.5□□□□□ -2.01
EXOSC3-208ENST00000496910 C16orf74Q96GX8 76 aa2.5□□□□□ -2.01
EXOSC3-208ENST00000496910 ABHD14BQ96IU4 210 aa2.5□□□□□ -2.01
EXOSC3-208ENST00000496910 C1orf147Q96MC9 270 aaPredicted RBP2.5□□□□□ -2.01
EXOSC3-208ENST00000496910 CCDC115Q96NT0 180 aa2.5□□□□□ -2.01
EXOSC3-208ENST00000496910 TSSK6Q9BXA6 273 aa2.5□□□□□ -2.01
EXOSC3-208ENST00000496910 PDFQ9HBH1 243 aa2.5□□□□□ -2.01
EXOSC3-208ENST00000496910 MMP26Q9NRE1 261 aa2.5□□□□□ -2.01
EXOSC3-208ENST00000496910 TAC3Q9UHF0 121 aa2.5□□□□□ -2.01
EXOSC3-208ENST00000496910 ZNF230Q9UIE0 474 aaPredicted RBP2.5□□□□□ -2.01
EXOSC3-208ENST00000496910 SSR3Q9UNL2 185 aa2.5□□□□□ -2.01
EXOSC3-208ENST00000496910 MOB4Q9Y3A3 225 aa2.5□□□□□ -2.01
EXOSC3-208ENST00000496910 TRIP11Q15643 1979 aa2.5□□□□□ -2.01
EXOSC3-208ENST00000496910 FREM1Q5H8C1 2179 aa2.5□□□□□ -2.01
EXOSC3-208ENST00000496910 COL27A1Q8IZC6 1860 aaPredicted RBP2.5□□□□□ -2.01
EXOSC3-208ENST00000496910 PTPRJQ12913 1337 aa2.49□□□□□ -2.01
EXOSC3-208ENST00000496910 IGHV5-51A0A0C4DH38 117 aa2.49□□□□□ -2.01
EXOSC3-208ENST00000496910 IGHV5-10-1A0A0J9YXX1 117 aa2.49□□□□□ -2.01
EXOSC3-208ENST00000496910 A8MUN3 132 aa2.49□□□□□ -2.01
EXOSC3-208ENST00000496910 MIF4GDA9UHW6 222 aaKnown RBP2.49□□□□□ -2.01
EXOSC3-208ENST00000496910 C9JQL5 133 aa2.49□□□□□ -2.01
EXOSC3-208ENST00000496910 H3BSA7 217 aa2.49□□□□□ -2.01
EXOSC3-208ENST00000496910 LST1O00453 97 aa2.49□□□□□ -2.01
EXOSC3-208ENST00000496910 SLC17A3O00476 420 aa2.49□□□□□ -2.01
EXOSC3-208ENST00000496910 OR2J2O76002 312 aa2.49□□□□□ -2.01
EXOSC3-208ENST00000496910 CRYZL1O95825 349 aa2.49□□□□□ -2.01
EXOSC3-208ENST00000496910 IGLV3-25P01717 112 aa2.49□□□□□ -2.01
EXOSC3-208ENST00000496910 IGLV3-27P01718 113 aa2.49□□□□□ -2.01
EXOSC3-208ENST00000496910 HLA-DQB2P05538 268 aa2.49□□□□□ -2.01
EXOSC3-208ENST00000496910 CNTFRP26992 372 aa2.49□□□□□ -2.01
EXOSC3-208ENST00000496910 GABRA3P34903 492 aa2.49□□□□□ -2.01
EXOSC3-208ENST00000496910 PSMD8P48556 350 aa2.49□□□□□ -2.01
EXOSC3-208ENST00000496910 UBE2AP49459 152 aa2.49□□□□□ -2.01
EXOSC3-208ENST00000496910 ZNF83P51522 516 aa2.49□□□□□ -2.01
EXOSC3-208ENST00000496910 LYZP61626 148 aa2.49□□□□□ -2.01
EXOSC3-208ENST00000496910 ELF3P78545 371 aaPredicted RBP2.49□□□□□ -2.01
EXOSC3-208ENST00000496910 LTC4SQ16873 150 aa2.49□□□□□ -2.01
EXOSC3-208ENST00000496910 RPL13AP3Q6NVV1 102 aa2.49□□□□□ -2.01
EXOSC3-208ENST00000496910 KRTCAP2Q8N6L1 136 aa2.49□□□□□ -2.01
EXOSC3-208ENST00000496910 C14orf178Q8N769 122 aaPredicted RBP2.49□□□□□ -2.01
EXOSC3-208ENST00000496910 ZNF283Q8N7M2 679 aa2.49□□□□□ -2.01
EXOSC3-208ENST00000496910 POM121L12Q8N7R1 296 aa2.49□□□□□ -2.01
EXOSC3-208ENST00000496910 ZNF615Q8N8J6 731 aa2.49□□□□□ -2.01
EXOSC3-208ENST00000496910 C15orf56Q8N910 161 aa2.49□□□□□ -2.01
EXOSC3-208ENST00000496910 ZNF721Q8TF20 911 aa2.49□□□□□ -2.01
EXOSC3-208ENST00000496910 GPR146Q96CH1 333 aa2.49□□□□□ -2.01
EXOSC3-208ENST00000496910 STARD4Q96DR4 205 aa2.49□□□□□ -2.01
EXOSC3-208ENST00000496910 GNPNAT1Q96EK6 184 aaPredicted RBP2.49□□□□□ -2.01
EXOSC3-208ENST00000496910 IGF2BP2-AS1Q96M15 143 aa2.49□□□□□ -2.01
EXOSC3-208ENST00000496910 GPR82Q96P67 336 aa2.49□□□□□ -2.01
EXOSC3-208ENST00000496910 LYSMD1Q96S90 227 aa2.49□□□□□ -2.01
EXOSC3-208ENST00000496910 SERPINI1Q99574 410 aa2.49□□□□□ -2.01
EXOSC3-208ENST00000496910 KLF6Q99612 283 aaPredicted RBP2.49□□□□□ -2.01
EXOSC3-208ENST00000496910 PBDC1Q9BVG4 233 aa2.49□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms