RNA–Protein interactions for RNA: ENST00000496711.5

GARNL3-220, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 1 (best)

Gene GARNL3, Length 1,859 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-220ENST00000496711 SRSF8Q9BRL6 282 aaKnown RBP10.42□□□□□ -0.74
GARNL3-220ENST00000496711 NIT2Q9NQR4 276 aa10.42□□□□□ -0.74
GARNL3-220ENST00000496711 PYYP10082 97 aa10.41□□□□□ -0.74
GARNL3-220ENST00000496711 PRTN3P24158 256 aa10.41□□□□□ -0.74
GARNL3-220ENST00000496711 KLRD1Q13241 179 aa10.41□□□□□ -0.74
GARNL3-220ENST00000496711 MMDQ15546 238 aa10.41□□□□□ -0.74
GARNL3-220ENST00000496711 RUSC1-AS1Q66K80 236 aa10.41□□□□□ -0.74
GARNL3-220ENST00000496711 LINC00305Q7Z4B0 112 aa10.41□□□□□ -0.74
GARNL3-220ENST00000496711 TMEM183AQ8IXX5 376 aa10.41□□□□□ -0.74
GARNL3-220ENST00000496711 CFHR4Q92496 578 aa10.41□□□□□ -0.74
GARNL3-220ENST00000496711 PERPQ96FX8 193 aa10.41□□□□□ -0.74
GARNL3-220ENST00000496711 OR51M1Q9H341 326 aa10.41□□□□□ -0.74
GARNL3-220ENST00000496711 IL36BQ9NZH7 164 aa10.41□□□□□ -0.74
GARNL3-220ENST00000496711 TRAV9-1A0A075B6T8 112 aa10.4□□□□□ -0.74
GARNL3-220ENST00000496711 A0A1W2PPR1 153 aa10.4□□□□□ -0.74
GARNL3-220ENST00000496711 NBR2O15453 112 aa10.4□□□□□ -0.74
GARNL3-220ENST00000496711 GPR6P46095 362 aaPredicted RBP10.4□□□□□ -0.74
GARNL3-220ENST00000496711 RPL15P61313 204 aaKnown RBP10.4□□□□□ -0.74
GARNL3-220ENST00000496711 KIR3DL3Q8N743 410 aa10.4□□□□□ -0.74
GARNL3-220ENST00000496711 HILPDAQ9Y5L2 63 aa10.4□□□□□ -0.74
GARNL3-220ENST00000496711 FCN1O00602 326 aa10.4□□□□□ -0.75
GARNL3-220ENST00000496711 CDKN1AP38936 164 aa10.4□□□□□ -0.75
GARNL3-220ENST00000496711 LGALS4P56470 323 aa10.4□□□□□ -0.75
GARNL3-220ENST00000496711 TIGITQ495A1 244 aa10.4□□□□□ -0.75
GARNL3-220ENST00000496711 STXBP6Q8NFX7 210 aa10.4□□□□□ -0.75
GARNL3-220ENST00000496711 OR10D4PQ8NGN7 298 aa10.4□□□□□ -0.75
GARNL3-220ENST00000496711 OR1B1Q8NGR6 318 aa10.4□□□□□ -0.75
GARNL3-220ENST00000496711 FXYD5Q96DB9 178 aa10.4□□□□□ -0.75
GARNL3-220ENST00000496711 IGF2BP2-AS1Q96M15 143 aa10.4□□□□□ -0.75
GARNL3-220ENST00000496711 DMRT1Q9Y5R6 373 aa10.4□□□□□ -0.75
GARNL3-220ENST00000496711 LRBAP50851 2863 aa10.39□□□□□ -0.75
GARNL3-220ENST00000496711 IGHV3-21A0A0B4J1V1 117 aa10.39□□□□□ -0.75
GARNL3-220ENST00000496711 XKRY2A2RUG3 117 aa10.39□□□□□ -0.75
GARNL3-220ENST00000496711 CNIH1O95406 144 aa10.39□□□□□ -0.75
GARNL3-220ENST00000496711 FABP4P15090 132 aa10.39□□□□□ -0.75
GARNL3-220ENST00000496711 ORM2P19652 201 aa10.39□□□□□ -0.75
GARNL3-220ENST00000496711 ERVFC1-1P60608 527 aa10.39□□□□□ -0.75
GARNL3-220ENST00000496711 COA6Q5JTJ3 125 aaKnown RBP10.39□□□□□ -0.75
GARNL3-220ENST00000496711 LHFPL4Q7Z7J7 247 aa10.39□□□□□ -0.75
GARNL3-220ENST00000496711 TRAPPC1Q9Y5R8 145 aa10.39□□□□□ -0.75
GARNL3-220ENST00000496711 CHD8Q9HCK8 2581 aa10.39□□□□□ -0.75
GARNL3-220ENST00000496711 A6NNC1 897 aa10.38□□□□□ -0.75
GARNL3-220ENST00000496711 SLC17A3O00476 420 aa10.38□□□□□ -0.75
GARNL3-220ENST00000496711 ZZEF1O43149 2961 aa10.38□□□□□ -0.75
GARNL3-220ENST00000496711 NDUFA3O95167 84 aa10.38□□□□□ -0.75
GARNL3-220ENST00000496711 OR5I1Q13606 314 aa10.38□□□□□ -0.75
GARNL3-220ENST00000496711 RPEL1Q2QD12 228 aa10.38□□□□□ -0.75
GARNL3-220ENST00000496711 PYY3Q5JQD4 70 aa10.38□□□□□ -0.75
GARNL3-220ENST00000496711 C1orf122Q6ZSJ8 110 aa10.38□□□□□ -0.75
GARNL3-220ENST00000496711 ZNF329Q86UD4 541 aa10.38□□□□□ -0.75
GARNL3-220ENST00000496711 NPBQ8NG41 125 aa10.38□□□□□ -0.75
GARNL3-220ENST00000496711 ITLN2Q8WWU7 325 aaPredicted RBP10.38□□□□□ -0.75
GARNL3-220ENST00000496711 UBTD1Q9HAC8 227 aa10.38□□□□□ -0.75
GARNL3-220ENST00000496711 V9GYV3 84 aa10.38□□□□□ -0.75
GARNL3-220ENST00000496711 DCHS2Q6V1P9 2916 aa10.38□□□□□ -0.75
GARNL3-220ENST00000496711 NCOR2Q9Y618 2525 aa10.38□□□□□ -0.75
GARNL3-220ENST00000496711 I3L2K1 104 aa10.38□□□□□ -0.75
GARNL3-220ENST00000496711 HYPMO75409 117 aa10.38□□□□□ -0.75
GARNL3-220ENST00000496711 PDLIM4P50479 330 aa10.38□□□□□ -0.75
GARNL3-220ENST00000496711 CNN1P51911 297 aaKnown RBP10.38□□□□□ -0.75
GARNL3-220ENST00000496711 TAS2R60P59551 318 aa10.38□□□□□ -0.75
GARNL3-220ENST00000496711 PLP1P60201 277 aa10.38□□□□□ -0.75
GARNL3-220ENST00000496711 VMO1Q7Z5L0 202 aa10.38□□□□□ -0.75
GARNL3-220ENST00000496711 HIST1H2BLQ99880 126 aa10.38□□□□□ -0.75
GARNL3-220ENST00000496711 CDC42EP3Q9UKI2 254 aa10.38□□□□□ -0.75
GARNL3-220ENST00000496711 RELNP78509 3460 aa10.38□□□□□ -0.75
GARNL3-220ENST00000496711 SPTBN1Q01082 2364 aaKnown RBP10.37□□□□□ -0.75
GARNL3-220ENST00000496711 GCGP01275 180 aa10.37□□□□□ -0.75
GARNL3-220ENST00000496711 IGLV2-8P01709 118 aa10.37□□□□□ -0.75
GARNL3-220ENST00000496711 FABP1P07148 127 aa10.37□□□□□ -0.75
GARNL3-220ENST00000496711 IGLC1P0CG04 106 aa10.37□□□□□ -0.75
GARNL3-220ENST00000496711 UQCRFS1P47985 274 aa10.37□□□□□ -0.75
GARNL3-220ENST00000496711 CCDC144NLQ6NUI1 221 aa10.37□□□□□ -0.75
GARNL3-220ENST00000496711 PACRGQ96M98 296 aaPredicted RBP10.37□□□□□ -0.75
GARNL3-220ENST00000496711 WNT10AQ9GZT5 417 aa10.37□□□□□ -0.75
GARNL3-220ENST00000496711 OSTCQ9NRP0 149 aa10.37□□□□□ -0.75
GARNL3-220ENST00000496711 A0A1W2PRD5 423 aa10.36□□□□□ -0.75
GARNL3-220ENST00000496711 A0A1W2PRF3 423 aa10.36□□□□□ -0.75
GARNL3-220ENST00000496711 A0A1W2PRM7 423 aa10.36□□□□□ -0.75
GARNL3-220ENST00000496711 OOSP1A8MZH6 123 aa10.36□□□□□ -0.75
GARNL3-220ENST00000496711 PEX7O00628 323 aa10.36□□□□□ -0.75
GARNL3-220ENST00000496711 HOXB4P17483 251 aaPredicted RBP10.36□□□□□ -0.75
GARNL3-220ENST00000496711 HES1Q14469 280 aa10.36□□□□□ -0.75
GARNL3-220ENST00000496711 OR1L6Q8NGR2 347 aa10.36□□□□□ -0.75
GARNL3-220ENST00000496711 GSN-AS1Q9NRJ2 163 aa10.36□□□□□ -0.75
GARNL3-220ENST00000496711 ISLRO14498 428 aa10.36□□□□□ -0.75
GARNL3-220ENST00000496711 NDUFS7O75251 213 aa10.36□□□□□ -0.75
GARNL3-220ENST00000496711 MGST1P10620 155 aaKnown RBP10.36□□□□□ -0.75
GARNL3-220ENST00000496711 MYCNOSP40205 109 aa10.36□□□□□ -0.75
GARNL3-220ENST00000496711 YPEL3P61236 119 aaPredicted RBP10.36□□□□□ -0.75
GARNL3-220ENST00000496711 FXYD3Q14802 87 aa10.36□□□□□ -0.75
GARNL3-220ENST00000496711 C5orf64Q2M2E5 130 aa10.36□□□□□ -0.75
GARNL3-220ENST00000496711 RASL11BQ9BPW5 248 aa10.36□□□□□ -0.75
GARNL3-220ENST00000496711 RNASE7Q9H1E1 156 aaKnown RBP10.36□□□□□ -0.75
GARNL3-220ENST00000496711 GSX1Q9H4S2 264 aaPredicted RBP10.36□□□□□ -0.75
GARNL3-220ENST00000496711 HIGD1AQ9Y241 93 aa10.36□□□□□ -0.75
GARNL3-220ENST00000496711 GP9P14770 177 aa10.35□□□□□ -0.75
GARNL3-220ENST00000496711 HIST1H1BP16401 226 aaKnown RBP10.35□□□□□ -0.75
GARNL3-220ENST00000496711 GNLYP22749 145 aa10.35□□□□□ -0.75
GARNL3-220ENST00000496711 CD24P25063 80 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms