RNA–Protein interactions for RNA: ENST00000496050.1

SSR3-208, Transcript of signal sequence receptor subunit 3, humanhuman

TSL 4 BASIC

Gene SSR3, Length 579 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-208ENST00000496050 OR52R1Q8NGF1 315 aa1.87□□□□□ -2.11
SSR3-208ENST00000496050 HIST1H2BLQ99880 126 aa1.87□□□□□ -2.11
SSR3-208ENST00000496050 PARVBQ9HBI1 364 aa1.87□□□□□ -2.11
SSR3-208ENST00000496050 OPTCQ9UBM4 332 aa1.87□□□□□ -2.11
SSR3-208ENST00000496050 SOX21Q9Y651 276 aaPredicted RBP1.87□□□□□ -2.11
SSR3-208ENST00000496050 SDK1Q7Z5N4 2213 aa1.86□□□□□ -2.11
SSR3-208ENST00000496050 FMN1Q68DA7 1419 aa1.86□□□□□ -2.11
SSR3-208ENST00000496050 C7orf71A4D174 169 aa1.86□□□□□ -2.11
SSR3-208ENST00000496050 CYBAP13498 195 aa1.86□□□□□ -2.11
SSR3-208ENST00000496050 DEFA3P59666 94 aa1.86□□□□□ -2.11
SSR3-208ENST00000496050 ARF6P62330 175 aa1.86□□□□□ -2.11
SSR3-208ENST00000496050 RHOBP62745 196 aa1.86□□□□□ -2.11
SSR3-208ENST00000496050 BASP1P80723 227 aaKnown RBP1.86□□□□□ -2.11
SSR3-208ENST00000496050 OR11H6Q8NGC7 330 aa1.86□□□□□ -2.11
SSR3-208ENST00000496050 OR10X1Q8NGY0 326 aa1.86□□□□□ -2.11
SSR3-208ENST00000496050 C9orf16Q9BUW7 83 aa1.86□□□□□ -2.11
SSR3-208ENST00000496050 ARL5AQ9Y689 179 aa1.86□□□□□ -2.11
SSR3-208ENST00000496050 KIF1BO60333 1816 aa1.86□□□□□ -2.11
SSR3-208ENST00000496050 TRAV1-1A0A0B4J248 108 aa1.85□□□□□ -2.11
SSR3-208ENST00000496050 ANGP03950 147 aaKnown RBP1.85□□□□□ -2.11
SSR3-208ENST00000496050 BAALC-AS2P0C853 105 aa1.85□□□□□ -2.11
SSR3-208ENST00000496050 MIFP14174 115 aa1.85□□□□□ -2.11
SSR3-208ENST00000496050 BRS3P32247 399 aa1.85□□□□□ -2.11
SSR3-208ENST00000496050 OR4C6Q8NH72 309 aa1.85□□□□□ -2.11
SSR3-208ENST00000496050 AQP3Q92482 292 aa1.85□□□□□ -2.11
SSR3-208ENST00000496050 ANP32BQ92688 251 aaKnown RBP1.85□□□□□ -2.11
SSR3-208ENST00000496050 CEP19Q96LK0 163 aa1.85□□□□□ -2.11
SSR3-208ENST00000496050 REG4Q9BYZ8 158 aa1.85□□□□□ -2.11
SSR3-208ENST00000496050 ARMC1Q9NVT9 282 aa1.85□□□□□ -2.11
SSR3-208ENST00000496050 SLC35A3Q9Y2D2 325 aa1.85□□□□□ -2.11
SSR3-208ENST00000496050 OTOGLQ3ZCN5 2332 aa1.84□□□□□ -2.11
SSR3-208ENST00000496050 IGKV3-7A0A075B6H7 116 aa1.84□□□□□ -2.11
SSR3-208ENST00000496050 TRAV4A0A0B4J268 109 aa1.84□□□□□ -2.11
SSR3-208ENST00000496050 HMGB3O15347 200 aaKnown RBP1.84□□□□□ -2.11
SSR3-208ENST00000496050 ARL14EPLP0DKL9 152 aa1.84□□□□□ -2.11
SSR3-208ENST00000496050 SERPINB9P50453 376 aa1.84□□□□□ -2.11
SSR3-208ENST00000496050 SURF2Q15527 256 aaPredicted RBP1.84□□□□□ -2.11
SSR3-208ENST00000496050 TSNQ15631 228 aaKnown RBP1.84□□□□□ -2.11
SSR3-208ENST00000496050 PXT1Q8NFP0 134 aa1.84□□□□□ -2.11
SSR3-208ENST00000496050 OR8D4Q8NGM9 314 aa1.84□□□□□ -2.11
SSR3-208ENST00000496050 FREM1Q5H8C1 2179 aa1.83□□□□□ -2.12
SSR3-208ENST00000496050 TRBV19A0A075B6N1 114 aa1.83□□□□□ -2.12
SSR3-208ENST00000496050 OR2T1O43869 369 aa1.83□□□□□ -2.12
SSR3-208ENST00000496050 PROSCO94903 275 aa1.83□□□□□ -2.12
SSR3-208ENST00000496050 PIGPP57054 158 aa1.83□□□□□ -2.12
SSR3-208ENST00000496050 TAF1AQ15573 450 aaPredicted RBP1.83□□□□□ -2.12
SSR3-208ENST00000496050 GOLT1AQ6ZVE7 132 aa1.83□□□□□ -2.12
SSR3-208ENST00000496050 S100A7AQ86SG5 101 aa1.83□□□□□ -2.12
SSR3-208ENST00000496050 LINC00311Q8N616 119 aa1.83□□□□□ -2.12
SSR3-208ENST00000496050 OR13D1Q8NGV5 346 aa1.83□□□□□ -2.12
SSR3-208ENST00000496050 OR2T10Q8NGZ9 312 aa1.83□□□□□ -2.12
SSR3-208ENST00000496050 WFDC5Q8TCV5 224 aa1.83□□□□□ -2.12
SSR3-208ENST00000496050 C10orf105Q8TEF2 133 aa1.83□□□□□ -2.12
SSR3-208ENST00000496050 TRABDQ9H4I3 376 aa1.83□□□□□ -2.12
SSR3-208ENST00000496050 BAZ2BQ9UIF8 2168 aaKnown RBP1.82□□□□□ -2.12
SSR3-208ENST00000496050 ZNF106Q9H2Y7 1883 aaKnown RBP1.82□□□□□ -2.12
SSR3-208ENST00000496050 PLXND1Q9Y4D7 1925 aa1.82□□□□□ -2.12
SSR3-208ENST00000496050 IGKV1-9A0A0C4DH69 117 aa1.82□□□□□ -2.12
SSR3-208ENST00000496050 CLDN25C9JDP6 229 aa1.82□□□□□ -2.12
SSR3-208ENST00000496050 OR1I1O60431 355 aa1.82□□□□□ -2.12
SSR3-208ENST00000496050 MGST1P10620 155 aaKnown RBP1.82□□□□□ -2.12
SSR3-208ENST00000496050 NEFHP12036 1026 aa1.82□□□□□ -2.12
SSR3-208ENST00000496050 RNASE3P12724 160 aaKnown RBP1.82□□□□□ -2.12
SSR3-208ENST00000496050 S100A5P33763 92 aa1.82□□□□□ -2.12
SSR3-208ENST00000496050 RHOGP84095 191 aa1.82□□□□□ -2.12
SSR3-208ENST00000496050 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP1.82□□□□□ -2.12
SSR3-208ENST00000496050 ADAT3Q96EY9 351 aaPredicted RBP1.82□□□□□ -2.12
SSR3-208ENST00000496050 C2orf70A6NJV1 201 aa1.81□□□□□ -2.12
SSR3-208ENST00000496050 HCRTO43612 131 aa1.81□□□□□ -2.12
SSR3-208ENST00000496050 UBL3O95164 117 aa1.81□□□□□ -2.12
SSR3-208ENST00000496050 IFNA7P01567 189 aa1.81□□□□□ -2.12
SSR3-208ENST00000496050 SRIP30626 198 aa1.81□□□□□ -2.12
SSR3-208ENST00000496050 SRP14P37108 136 aaKnown RBP1.81□□□□□ -2.12
SSR3-208ENST00000496050 SSR2P43308 183 aa1.81□□□□□ -2.12
SSR3-208ENST00000496050 HSPE1P61604 102 aaKnown RBP1.81□□□□□ -2.12
SSR3-208ENST00000496050 EIF5AP63241 154 aaKnown RBP1.81□□□□□ -2.12
SSR3-208ENST00000496050 BRMS1LQ5PSV4 323 aa1.81□□□□□ -2.12
SSR3-208ENST00000496050 TMEM133Q9H2Q1 129 aa1.81□□□□□ -2.12
SSR3-208ENST00000496050 HS3ST2Q9Y278 367 aa1.81□□□□□ -2.12
SSR3-208ENST00000496050 COL4A5P29400 1685 aa1.8□□□□□ -2.12
SSR3-208ENST00000496050 ANAPC1Q9H1A4 1944 aa1.8□□□□□ -2.12
SSR3-208ENST00000496050 PCDH15Q96QU1 1955 aa1.8□□□□□ -2.12
SSR3-208ENST00000496050 SCN10AQ9Y5Y9 1956 aa1.8□□□□□ -2.12
SSR3-208ENST00000496050 SULT1B1O43704 296 aa1.8□□□□□ -2.12
SSR3-208ENST00000496050 LYNX1P0DP58 116 aa1.8□□□□□ -2.12
SSR3-208ENST00000496050 PDE6HQ13956 83 aa1.8□□□□□ -2.12
SSR3-208ENST00000496050 RNASE10Q5GAN6 216 aaKnown RBP1.8□□□□□ -2.12
SSR3-208ENST00000496050 DHRS4L2Q6PKH6 230 aa1.8□□□□□ -2.12
SSR3-208ENST00000496050 C15orf53Q8NAA6 179 aa1.8□□□□□ -2.12
SSR3-208ENST00000496050 RETNLBQ9BQ08 111 aa1.8□□□□□ -2.12
SSR3-208ENST00000496050 IMUPQ9GZP8 106 aa1.8□□□□□ -2.12
SSR3-208ENST00000496050 STOML2Q9UJZ1 356 aa1.8□□□□□ -2.12
SSR3-208ENST00000496050 SNURFQ9Y675 71 aa1.8□□□□□ -2.12
SSR3-208ENST00000496050 PRRC2BQ5JSZ5 2229 aaKnown RBP1.8□□□□□ -2.12
SSR3-208ENST00000496050 SBF1O95248 1867 aa1.8□□□□□ -2.12
SSR3-208ENST00000496050 HEATR5BQ9P2D3 2071 aa1.79□□□□□ -2.12
SSR3-208ENST00000496050 ATP5G3P48201 142 aa1.79□□□□□ -2.12
SSR3-208ENST00000496050 KRR1Q13601 381 aaKnown RBP1.79□□□□□ -2.12
SSR3-208ENST00000496050 HACD4Q5VWC8 232 aa1.79□□□□□ -2.12
SSR3-208ENST00000496050 LINC00301Q8NCQ3 95 aa1.79□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 98.7 ms