RNA–Protein interactions for RNA: ENST00000496049.1

GAPDH-210, Transcript of glyceraldehyde-3-phosphate dehydrogenase, humanhuman

TSL 2

Gene GAPDH, Length 390 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Exosome, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPDH-210ENST00000496049 TMEM116Q8NCL8 245 aa11.66□□□□□ -0.54
GAPDH-210ENST00000496049 TAF15Q92804 592 aaKnown RBP eCLIP11.66□□□□□ -0.54
GAPDH-210ENST00000496049 ATP6V0BQ99437 205 aa11.66□□□□□ -0.54
GAPDH-210ENST00000496049 PARD6GQ9BYG4 376 aaPredicted RBP11.66□□□□□ -0.54
GAPDH-210ENST00000496049 ZFP92A6NM28 416 aa11.65□□□□□ -0.54
GAPDH-210ENST00000496049 C17orf112F2Z3M2 114 aa11.65□□□□□ -0.54
GAPDH-210ENST00000496049 IGHV3-48P01763 117 aa11.65□□□□□ -0.54
GAPDH-210ENST00000496049 TPT1P13693 172 aaKnown RBP11.65□□□□□ -0.54
GAPDH-210ENST00000496049 MDKP21741 143 aaPredicted RBP11.65□□□□□ -0.54
GAPDH-210ENST00000496049 FCGR2BP31994 310 aaPredicted RBP11.65□□□□□ -0.54
GAPDH-210ENST00000496049 LAMTOR1Q6IAA8 161 aa11.65□□□□□ -0.54
GAPDH-210ENST00000496049 NPIPB3Q92617 1050 aa11.65□□□□□ -0.54
GAPDH-210ENST00000496049 WDR61Q9GZS3 305 aaKnown RBP11.65□□□□□ -0.54
GAPDH-210ENST00000496049 KLK15Q9H2R5 256 aa11.65□□□□□ -0.54
GAPDH-210ENST00000496049 WDR83OSQ9Y284 106 aa11.65□□□□□ -0.54
GAPDH-210ENST00000496049 NUPL2O15504 423 aaKnown RBP11.64□□□□□ -0.55
GAPDH-210ENST00000496049 CLN5O75503 358 aa11.64□□□□□ -0.55
GAPDH-210ENST00000496049 RPLP1P05386 114 aaKnown RBP11.64□□□□□ -0.55
GAPDH-210ENST00000496049 OR10J1P30954 320 aa11.64□□□□□ -0.55
GAPDH-210ENST00000496049 AWAT1Q58HT5 328 aa11.64□□□□□ -0.55
GAPDH-210ENST00000496049 RPL7L1Q6DKI1 246 aaKnown RBP11.64□□□□□ -0.55
GAPDH-210ENST00000496049 EIF5AL1Q6IS14 154 aaKnown RBP11.64□□□□□ -0.55
GAPDH-210ENST00000496049 BTNL8Q6UX41 500 aa11.64□□□□□ -0.55
GAPDH-210ENST00000496049 STOML3Q8TAV4 291 aa11.64□□□□□ -0.55
GAPDH-210ENST00000496049 ZNF502Q8TBZ5 544 aa11.64□□□□□ -0.55
GAPDH-210ENST00000496049 GNPNAT1Q96EK6 184 aaPredicted RBP11.64□□□□□ -0.55
GAPDH-210ENST00000496049 WFDC1Q9HC57 220 aa11.64□□□□□ -0.55
GAPDH-210ENST00000496049 IGHV3-23P01764 117 aa11.63□□□□□ -0.55
GAPDH-210ENST00000496049 PROK1P58294 105 aa11.63□□□□□ -0.55
GAPDH-210ENST00000496049 MLANAQ16655 118 aa11.63□□□□□ -0.55
GAPDH-210ENST00000496049 SPSB3Q6PJ21 355 aa11.63□□□□□ -0.55
GAPDH-210ENST00000496049 C10orf99Q6UWK7 81 aa11.63□□□□□ -0.55
GAPDH-210ENST00000496049 THAP8Q8NA92 274 aa11.63□□□□□ -0.55
GAPDH-210ENST00000496049 MYOZ3Q8TDC0 251 aa11.63□□□□□ -0.55
GAPDH-210ENST00000496049 UBE2E2Q96LR5 201 aa11.63□□□□□ -0.55
GAPDH-210ENST00000496049 NPCDR1Q9BY65 106 aa11.63□□□□□ -0.55
GAPDH-210ENST00000496049 S4R3C0 116 aa11.63□□□□□ -0.55
GAPDH-210ENST00000496049 BIRC6Q9NR09 4857 aa11.63□□□□□ -0.55
GAPDH-210ENST00000496049 TCRBV4S1A1TA0A5B7 111 aa11.62□□□□□ -0.55
GAPDH-210ENST00000496049 OR2T8A6NH00 312 aa11.62□□□□□ -0.55
GAPDH-210ENST00000496049 IGHV3-11P01762 117 aa11.62□□□□□ -0.55
GAPDH-210ENST00000496049 GPR183P32249 361 aa11.62□□□□□ -0.55
GAPDH-210ENST00000496049 CAMLGP49069 296 aa11.62□□□□□ -0.55
GAPDH-210ENST00000496049 LCNL1Q6ZST4 164 aa11.62□□□□□ -0.55
GAPDH-210ENST00000496049 ZNF491Q8N8L2 437 aa11.62□□□□□ -0.55
GAPDH-210ENST00000496049 HSD17B11Q8NBQ5 300 aa11.62□□□□□ -0.55
GAPDH-210ENST00000496049 WFDC12Q8WWY7 111 aa11.62□□□□□ -0.55
GAPDH-210ENST00000496049 CCDC140Q96MF4 163 aa11.62□□□□□ -0.55
GAPDH-210ENST00000496049 TRGV9Q99603 122 aa11.62□□□□□ -0.55
GAPDH-210ENST00000496049 KRTAP17-1Q9BYP8 105 aa11.62□□□□□ -0.55
GAPDH-210ENST00000496049 GNB4Q9HAV0 340 aa11.62□□□□□ -0.55
GAPDH-210ENST00000496049 CYTL1Q9NRR1 136 aa11.62□□□□□ -0.55
GAPDH-210ENST00000496049 LSM4Q9Y4Z0 139 aaKnown RBP11.62□□□□□ -0.55
GAPDH-210ENST00000496049 TIMM9Q9Y5J7 89 aa11.62□□□□□ -0.55
GAPDH-210ENST00000496049 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.61□□□□□ -0.55
GAPDH-210ENST00000496049 NUDT19A8MXV4 375 aa11.61□□□□□ -0.55
GAPDH-210ENST00000496049 AGPAT2O15120 278 aa11.61□□□□□ -0.55
GAPDH-210ENST00000496049 LGALS1P09382 135 aaKnown RBP11.61□□□□□ -0.55
GAPDH-210ENST00000496049 IGLC1P0CG04 106 aa11.61□□□□□ -0.55
GAPDH-210ENST00000496049 ARL3P36405 182 aa11.61□□□□□ -0.55
GAPDH-210ENST00000496049 SELENOTP62341 195 aa11.61□□□□□ -0.55
GAPDH-210ENST00000496049 RELQ04864 619 aaPredicted RBP11.61□□□□□ -0.55
GAPDH-210ENST00000496049 ZNF343Q6P1L6 599 aa11.61□□□□□ -0.55
GAPDH-210ENST00000496049 SHISA2Q6UWI4 295 aa11.61□□□□□ -0.55
GAPDH-210ENST00000496049 CLEC19AQ6UXS0 136 aa11.61□□□□□ -0.55
GAPDH-210ENST00000496049 BAP18Q8IXM2 172 aa11.61□□□□□ -0.55
GAPDH-210ENST00000496049 WIPF2Q8TF74 440 aaPredicted RBP11.61□□□□□ -0.55
GAPDH-210ENST00000496049 C4orf3Q8WVX3 66 aa11.61□□□□□ -0.55
GAPDH-210ENST00000496049 ST8SIA2Q92186 375 aa11.61□□□□□ -0.55
GAPDH-210ENST00000496049 GINS3Q9BRX5 216 aa11.61□□□□□ -0.55
GAPDH-210ENST00000496049 MRPL36Q9P0J6 103 aaKnown RBP11.61□□□□□ -0.55
GAPDH-210ENST00000496049 BOLA1Q9Y3E2 137 aa11.61□□□□□ -0.55
GAPDH-210ENST00000496049 TSSC4Q9Y5U2 329 aaPredicted RBP11.61□□□□□ -0.55
GAPDH-210ENST00000496049 TGOLN2O43493 480 aa11.6□□□□□ -0.55
GAPDH-210ENST00000496049 CLEC3BP05452 202 aa11.6□□□□□ -0.55
GAPDH-210ENST00000496049 CDX1P47902 265 aaPredicted RBP11.6□□□□□ -0.55
GAPDH-210ENST00000496049 CYP2G1PQ6ZSU1 146 aa11.6□□□□□ -0.55
GAPDH-210ENST00000496049 KLHL30-AS1Q8NEE0 82 aa11.6□□□□□ -0.55
GAPDH-210ENST00000496049 BPIFCQ8NFQ6 507 aa11.6□□□□□ -0.55
GAPDH-210ENST00000496049 MGST2Q99735 147 aa11.6□□□□□ -0.55
GAPDH-210ENST00000496049 PSMG3Q9BT73 122 aaPredicted RBP11.6□□□□□ -0.55
GAPDH-210ENST00000496049 ZNF747Q9BV97 191 aa11.6□□□□□ -0.55
GAPDH-210ENST00000496049 GGTLC1Q9BX51 225 aa11.6□□□□□ -0.55
GAPDH-210ENST00000496049 PEF1Q9UBV8 284 aaKnown RBP11.6□□□□□ -0.55
GAPDH-210ENST00000496049 CFDP00746 253 aaPredicted RBP11.59□□□□□ -0.55
GAPDH-210ENST00000496049 CD28P10747 220 aa11.59□□□□□ -0.55
GAPDH-210ENST00000496049 ATP6V0CP27449 155 aa11.59□□□□□ -0.55
GAPDH-210ENST00000496049 YPEL3P61236 119 aaPredicted RBP11.59□□□□□ -0.55
GAPDH-210ENST00000496049 RUNX1Q01196 453 aa11.59□□□□□ -0.55
GAPDH-210ENST00000496049 ZNF616Q08AN1 781 aa11.59□□□□□ -0.55
GAPDH-210ENST00000496049 TIGITQ495A1 244 aa11.59□□□□□ -0.55
GAPDH-210ENST00000496049 PHYHIPLQ96FC7 376 aa11.59□□□□□ -0.55
GAPDH-210ENST00000496049 OR5B12Q96R08 314 aa11.59□□□□□ -0.55
GAPDH-210ENST00000496049 ARV1Q9H2C2 271 aa11.59□□□□□ -0.55
GAPDH-210ENST00000496049 IGKV1D-37A0A075B6S9 117 aa11.58□□□□□ -0.56
GAPDH-210ENST00000496049 IGKV1OR2-108A0A075B7D4 117 aa11.58□□□□□ -0.56
GAPDH-210ENST00000496049 ANKRD34BA5PLL1 514 aa11.58□□□□□ -0.56
GAPDH-210ENST00000496049 F8W735 103 aaPredicted RBP11.58□□□□□ -0.56
GAPDH-210ENST00000496049 GGCTO75223 188 aaKnown RBP11.58□□□□□ -0.56
GAPDH-210ENST00000496049 TSPAN15O95858 294 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms