RNA–Protein interactions for RNA: ENST00000495955.5

GAPVD1-219, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 1 (best) BASIC

Gene GAPVD1, Length 5,309 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-219ENST00000495955 RITA1Q96K30 269 aa7.55□□□□□ -1.2
GAPVD1-219ENST00000495955 A0A1B0GWJ7 208 aa7.55□□□□□ -1.2
GAPVD1-219ENST00000495955 SNAPINO95295 136 aa7.55□□□□□ -1.2
GAPVD1-219ENST00000495955 TMEM78Q5T7P6 136 aa7.55□□□□□ -1.2
GAPVD1-219ENST00000495955 SPSB3Q6PJ21 355 aa7.55□□□□□ -1.2
GAPVD1-219ENST00000495955 COMMD1Q8N668 190 aa7.55□□□□□ -1.2
GAPVD1-219ENST00000495955 C19orf24Q9BVV8 132 aa7.55□□□□□ -1.2
GAPVD1-219ENST00000495955 TMEM14BQ9NUH8 114 aa7.55□□□□□ -1.2
GAPVD1-219ENST00000495955 COL27A1Q8IZC6 1860 aaPredicted RBP7.54□□□□□ -1.2
GAPVD1-219ENST00000495955 PPP5D1E7EU14 171 aa7.54□□□□□ -1.2
GAPVD1-219ENST00000495955 TNFRSF13BO14836 293 aaPredicted RBP7.54□□□□□ -1.2
GAPVD1-219ENST00000495955 HSPB1P04792 205 aaKnown RBP7.54□□□□□ -1.2
GAPVD1-219ENST00000495955 FOXL1Q12952 345 aa7.54□□□□□ -1.2
GAPVD1-219ENST00000495955 MRPL32Q9BYC8 188 aaKnown RBP7.54□□□□□ -1.2
GAPVD1-219ENST00000495955 DPPA3Q6W0C5 159 aa7.54□□□□□ -1.2
GAPVD1-219ENST00000495955 PQLC2Q6ZP29 291 aa7.54□□□□□ -1.2
GAPVD1-219ENST00000495955 OR11H4Q8NGC9 324 aa7.54□□□□□ -1.2
GAPVD1-219ENST00000495955 OR1N2Q8NGR9 330 aa7.54□□□□□ -1.2
GAPVD1-219ENST00000495955 BSCL2Q96G97 398 aaPredicted RBP7.54□□□□□ -1.2
GAPVD1-219ENST00000495955 RAX2Q96IS3 184 aa7.54□□□□□ -1.2
GAPVD1-219ENST00000495955 NDUFA4L2Q9NRX3 87 aa7.54□□□□□ -1.2
GAPVD1-219ENST00000495955 A0A087X0M5 115 aa7.54□□□□□ -1.2
GAPVD1-219ENST00000495955 A0A1B0GX30 115 aa7.54□□□□□ -1.2
GAPVD1-219ENST00000495955 PGPA6NDG6 321 aa7.54□□□□□ -1.2
GAPVD1-219ENST00000495955 CLN5O75503 358 aa7.54□□□□□ -1.2
GAPVD1-219ENST00000495955 ARL14EPLP0DKL9 152 aa7.54□□□□□ -1.2
GAPVD1-219ENST00000495955 SYNJ2BPP57105 145 aa7.54□□□□□ -1.2
GAPVD1-219ENST00000495955 TVP23CQ96ET8 276 aa7.54□□□□□ -1.2
GAPVD1-219ENST00000495955 SOX21Q9Y651 276 aaPredicted RBP7.54□□□□□ -1.2
GAPVD1-219ENST00000495955 FASNP49327 2511 aaKnown RBP7.54□□□□□ -1.2
GAPVD1-219ENST00000495955 IGKV1-39P01597 117 aa7.54□□□□□ -1.2
GAPVD1-219ENST00000495955 IGKV1D-39P04432 117 aa7.54□□□□□ -1.2
GAPVD1-219ENST00000495955 LDLRAD2Q5SZI1 272 aa7.54□□□□□ -1.2
GAPVD1-219ENST00000495955 RAB24Q969Q5 203 aa7.54□□□□□ -1.2
GAPVD1-219ENST00000495955 RNF126Q9BV68 326 aa7.54□□□□□ -1.2
GAPVD1-219ENST00000495955 NDUFB8O95169 186 aa7.54□□□□□ -1.2
GAPVD1-219ENST00000495955 RNASE2P10153 161 aaKnown RBP7.54□□□□□ -1.2
GAPVD1-219ENST00000495955 ERVFC1-1P60608 527 aa7.54□□□□□ -1.2
GAPVD1-219ENST00000495955 LEMD1Q68G75 181 aa7.54□□□□□ -1.2
GAPVD1-219ENST00000495955 PRNTQ86SH4 94 aa7.54□□□□□ -1.2
GAPVD1-219ENST00000495955 GTSCR1Q86UQ5 136 aa7.54□□□□□ -1.2
GAPVD1-219ENST00000495955 SVBPQ8N300 66 aa7.54□□□□□ -1.2
GAPVD1-219ENST00000495955 LINC01619G3V211 115 aa7.53□□□□□ -1.2
GAPVD1-219ENST00000495955 MT-ND4LP03901 98 aa7.53□□□□□ -1.2
GAPVD1-219ENST00000495955 TMEM116Q8NCL8 245 aa7.53□□□□□ -1.2
GAPVD1-219ENST00000495955 RBFOX3A6NFN3 312 aa7.53□□□□□ -1.2
GAPVD1-219ENST00000495955 HIST1H1AQ02539 215 aaPredicted RBP7.53□□□□□ -1.2
GAPVD1-219ENST00000495955 C19orf35Q6ZS72 473 aa7.53□□□□□ -1.2
GAPVD1-219ENST00000495955 OR11H1Q8NG94 326 aa7.53□□□□□ -1.2
GAPVD1-219ENST00000495955 H0YIZ8 118 aa7.53□□□□□ -1.2
GAPVD1-219ENST00000495955 TGOLN2O43493 480 aa7.53□□□□□ -1.2
GAPVD1-219ENST00000495955 MLANAQ16655 118 aa7.53□□□□□ -1.2
GAPVD1-219ENST00000495955 SAT2Q96F10 170 aaPredicted RBP7.53□□□□□ -1.2
GAPVD1-219ENST00000495955 FUT9Q9Y231 359 aa7.53□□□□□ -1.2
GAPVD1-219ENST00000495955 ODF3BA8MYP8 253 aa7.52□□□□□ -1.21
GAPVD1-219ENST00000495955 SERTM2A0A1B0GWG4 89 aa7.52□□□□□ -1.21
GAPVD1-219ENST00000495955 ELANEP08246 267 aa7.52□□□□□ -1.21
GAPVD1-219ENST00000495955 PSG1P11464 419 aa7.52□□□□□ -1.21
GAPVD1-219ENST00000495955 IER3P46695 156 aa7.52□□□□□ -1.21
GAPVD1-219ENST00000495955 NDPQ00604 133 aa7.52□□□□□ -1.21
GAPVD1-219ENST00000495955 C5orf56Q8N8D9 126 aa7.52□□□□□ -1.21
GAPVD1-219ENST00000495955 NPBQ8NG41 125 aa7.52□□□□□ -1.21
GAPVD1-219ENST00000495955 TMEM158Q8WZ71 300 aa7.52□□□□□ -1.21
GAPVD1-219ENST00000495955 ORM1P02763 201 aa7.52□□□□□ -1.21
GAPVD1-219ENST00000495955 ZNF90Q03938 601 aa7.52□□□□□ -1.21
GAPVD1-219ENST00000495955 UTF1Q5T230 341 aa7.52□□□□□ -1.21
GAPVD1-219ENST00000495955 ODF3L1Q8IXM7 274 aa7.52□□□□□ -1.21
GAPVD1-219ENST00000495955 PUSL1Q8N0Z8 303 aaKnown RBP7.52□□□□□ -1.21
GAPVD1-219ENST00000495955 NPIPB5A8MRT5 1133 aa7.52□□□□□ -1.21
GAPVD1-219ENST00000495955 SMIM17P0DL12 118 aa7.52□□□□□ -1.21
GAPVD1-219ENST00000495955 SRSF1Q07955 248 aaKnown RBP eCLIP7.52□□□□□ -1.218e-8■□□□□ 11
GAPVD1-219ENST00000495955 PSMG3Q9BT73 122 aaPredicted RBP7.52□□□□□ -1.21
GAPVD1-219ENST00000495955 MLXQ9UH92 298 aa7.52□□□□□ -1.21
GAPVD1-219ENST00000495955 VAX2Q9UIW0 290 aa7.52□□□□□ -1.21
GAPVD1-219ENST00000495955 Q6YL49 198 aa7.51□□□□□ -1.21
GAPVD1-219ENST00000495955 HSPB9Q9BQS6 159 aa7.51□□□□□ -1.21
GAPVD1-219ENST00000495955 TSSC4Q9Y5U2 329 aaPredicted RBP7.51□□□□□ -1.21
GAPVD1-219ENST00000495955 A0A1B0GUS0 222 aa7.51□□□□□ -1.21
GAPVD1-219ENST00000495955 DEFB121Q5J5C9 76 aa7.51□□□□□ -1.21
GAPVD1-219ENST00000495955 TREML4Q6UXN2 200 aa7.51□□□□□ -1.21
GAPVD1-219ENST00000495955 TCF24Q7RTU0 167 aa7.51□□□□□ -1.21
GAPVD1-219ENST00000495955 Q8N9W7 124 aa7.51□□□□□ -1.21
GAPVD1-219ENST00000495955 DBX1A6NMT0 343 aa7.51□□□□□ -1.21
GAPVD1-219ENST00000495955 ZNF705GA8MUZ8 300 aaPredicted RBP7.51□□□□□ -1.21
GAPVD1-219ENST00000495955 RPLP1P05386 114 aaKnown RBP7.51□□□□□ -1.21
GAPVD1-219ENST00000495955 NUTF2P61970 127 aaKnown RBP7.51□□□□□ -1.21
GAPVD1-219ENST00000495955 WT1-ASQ06250 92 aa7.51□□□□□ -1.21
GAPVD1-219ENST00000495955 MIR17HGQ75NE6 70 aa7.51□□□□□ -1.21
GAPVD1-219ENST00000495955 DYNAPQ8N1N2 210 aa7.51□□□□□ -1.21
GAPVD1-219ENST00000495955 TMEM86BQ8N661 226 aa7.51□□□□□ -1.21
GAPVD1-219ENST00000495955 IGHV7-81A0A0B4J1V7 117 aa7.51□□□□□ -1.21
GAPVD1-219ENST00000495955 OR4C46A6NHA9 309 aa7.51□□□□□ -1.21
GAPVD1-219ENST00000495955 C15orf62A8K5M9 175 aa7.51□□□□□ -1.21
GAPVD1-219ENST00000495955 VWC2LB2RUY7 222 aa7.51□□□□□ -1.21
GAPVD1-219ENST00000495955 SFTA3P0C7M3 94 aa7.51□□□□□ -1.21
GAPVD1-219ENST00000495955 CGB3P0DN86 165 aa7.51□□□□□ -1.21
GAPVD1-219ENST00000495955 CGB7P0DN87 165 aa7.51□□□□□ -1.21
GAPVD1-219ENST00000495955 RPL15P61313 204 aaKnown RBP7.51□□□□□ -1.21
GAPVD1-219ENST00000495955 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa7.51□□□□□ -1.21
GAPVD1-219ENST00000495955 VN1R17PQ8TDU5 208 aa7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms