RNA–Protein interactions for RNA: ENST00000495755.1

VPS52-221, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 5

Gene VPS52, Length 453 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-221ENST00000495755 LYZL2Q7Z4W2 148 aa5.31□□□□□ -1.56
VPS52-221ENST00000495755 LYG2Q86SG7 212 aa5.31□□□□□ -1.56
VPS52-221ENST00000495755 SLC24A4Q8NFF2 622 aa5.31□□□□□ -1.56
VPS52-221ENST00000495755 TRIM63Q969Q1 353 aa5.31□□□□□ -1.56
VPS52-221ENST00000495755 CSTL1Q9H114 145 aa5.31□□□□□ -1.56
VPS52-221ENST00000495755 MCUBQ9NWR8 336 aa5.31□□□□□ -1.56
VPS52-221ENST00000495755 HSPB7Q9UBY9 170 aa5.31□□□□□ -1.56
VPS52-221ENST00000495755 SHPKQ9UHJ6 478 aa5.31□□□□□ -1.56
VPS52-221ENST00000495755 U3KQE9 123 aa5.31□□□□□ -1.56
VPS52-221ENST00000495755 V9GYH0 126 aa5.31□□□□□ -1.56
VPS52-221ENST00000495755 DNAH10Q8IVF4 4471 aa5.3□□□□□ -1.56
VPS52-221ENST00000495755 A0A1W2PS18 150 aa5.3□□□□□ -1.56
VPS52-221ENST00000495755 MPTX1A8MV57 137 aa5.3□□□□□ -1.56
VPS52-221ENST00000495755 DNASE2O00115 360 aaPredicted RBP5.3□□□□□ -1.56
VPS52-221ENST00000495755 SCGB2A1O75556 95 aa5.3□□□□□ -1.56
VPS52-221ENST00000495755 NXPH3O95157 252 aa5.3□□□□□ -1.56
VPS52-221ENST00000495755 OR10J1P30954 320 aa5.3□□□□□ -1.56
VPS52-221ENST00000495755 RND2P52198 227 aa5.3□□□□□ -1.56
VPS52-221ENST00000495755 YPEL3P61236 119 aaPredicted RBP5.3□□□□□ -1.56
VPS52-221ENST00000495755 RPL11P62913 178 aaKnown RBP5.3□□□□□ -1.56
VPS52-221ENST00000495755 SRPXP78539 464 aa5.3□□□□□ -1.56
VPS52-221ENST00000495755 SMCO1Q147U7 214 aa5.3□□□□□ -1.56
VPS52-221ENST00000495755 RBMS2Q15434 407 aaKnown RBP5.3□□□□□ -1.56
VPS52-221ENST00000495755 ZNF79Q15937 498 aa5.3□□□□□ -1.56
VPS52-221ENST00000495755 PYDC2Q56P42 97 aa5.3□□□□□ -1.56
VPS52-221ENST00000495755 CCDC190Q86UF4 302 aa5.3□□□□□ -1.56
VPS52-221ENST00000495755 NOXA1Q86UR1 476 aa5.3□□□□□ -1.56
VPS52-221ENST00000495755 LGI3Q8N145 548 aa5.3□□□□□ -1.56
VPS52-221ENST00000495755 FAM24BQ8N5W8 94 aa5.3□□□□□ -1.56
VPS52-221ENST00000495755 OR1S2Q8NGQ3 325 aa5.3□□□□□ -1.56
VPS52-221ENST00000495755 Q8WTZ3 238 aa5.3□□□□□ -1.56
VPS52-221ENST00000495755 METTL26Q96S19 204 aa5.3□□□□□ -1.56
VPS52-221ENST00000495755 RBM38Q9H0Z9 239 aaKnown RBP5.3□□□□□ -1.56
VPS52-221ENST00000495755 RBKSQ9H477 322 aa5.3□□□□□ -1.56
VPS52-221ENST00000495755 TMEM231Q9H6L2 316 aa5.3□□□□□ -1.56
VPS52-221ENST00000495755 U3KQ87 197 aa5.3□□□□□ -1.56
VPS52-221ENST00000495755 K7EQG2 157 aa5.29□□□□□ -1.56
VPS52-221ENST00000495755 PITX3O75364 302 aa5.29□□□□□ -1.56
VPS52-221ENST00000495755 JTBO76095 146 aa5.29□□□□□ -1.56
VPS52-221ENST00000495755 ANXA3P12429 323 aa5.29□□□□□ -1.56
VPS52-221ENST00000495755 NPY1RP25929 384 aa5.29□□□□□ -1.56
VPS52-221ENST00000495755 FAUP35544 74 aaKnown RBP5.29□□□□□ -1.56
VPS52-221ENST00000495755 P2RY1P47900 373 aa5.29□□□□□ -1.56
VPS52-221ENST00000495755 ATP5IP56385 69 aaPredicted RBP5.29□□□□□ -1.56
VPS52-221ENST00000495755 AP3S2P59780 193 aa5.29□□□□□ -1.56
VPS52-221ENST00000495755 DEFB131AP59861 70 aa5.29□□□□□ -1.56
VPS52-221ENST00000495755 TMEM128Q5BJH2 165 aa5.29□□□□□ -1.56
VPS52-221ENST00000495755 LEMD1Q68G75 181 aa5.29□□□□□ -1.56
VPS52-221ENST00000495755 ETFRF1Q6IPR1 90 aa5.29□□□□□ -1.56
VPS52-221ENST00000495755 TOMM5Q8N4H5 51 aa5.29□□□□□ -1.56
VPS52-221ENST00000495755 LRTM2Q8N967 370 aa5.29□□□□□ -1.56
VPS52-221ENST00000495755 DTD1Q8TEA8 209 aa5.29□□□□□ -1.56
VPS52-221ENST00000495755 GATAD1Q8WUU5 269 aa5.29□□□□□ -1.56
VPS52-221ENST00000495755 DEDD2Q8WXF8 326 aa5.29□□□□□ -1.56
VPS52-221ENST00000495755 NPIPB3Q92617 1050 aa5.29□□□□□ -1.56
VPS52-221ENST00000495755 SLC25A21Q9BQT8 299 aaPredicted RBP5.29□□□□□ -1.56
VPS52-221ENST00000495755 PIGBOS1A0A0B4J2F0 54 aa5.28□□□□□ -1.56
VPS52-221ENST00000495755 DUXBA0A1W2PPF3 345 aa5.28□□□□□ -1.56
VPS52-221ENST00000495755 CXorf65A6NEN9 183 aa5.28□□□□□ -1.56
VPS52-221ENST00000495755 CCDC160A6NGH7 325 aa5.28□□□□□ -1.56
VPS52-221ENST00000495755 ZNF701M0R085 212 aaPredicted RBP5.28□□□□□ -1.56
VPS52-221ENST00000495755 TOMM40O96008 361 aa5.28□□□□□ -1.56
VPS52-221ENST00000495755 IFNA10P01566 189 aa5.28□□□□□ -1.56
VPS52-221ENST00000495755 HNRNPCP07910 306 aaKnown RBP eCLIP5.28□□□□□ -1.56
VPS52-221ENST00000495755 GIG44P09565 113 aaPredicted RBP5.28□□□□□ -1.56
VPS52-221ENST00000495755 RD3LP0DJH9 198 aa5.28□□□□□ -1.56
VPS52-221ENST00000495755 S100A5P33763 92 aa5.28□□□□□ -1.56
VPS52-221ENST00000495755 GPX4P36969 197 aaPredicted RBP5.28□□□□□ -1.56
VPS52-221ENST00000495755 USF2Q15853 346 aaPredicted RBP5.28□□□□□ -1.56
VPS52-221ENST00000495755 CEMP1Q6PRD7 247 aaPredicted RBP5.28□□□□□ -1.56
VPS52-221ENST00000495755 C16orf54Q6UWD8 224 aa5.28□□□□□ -1.56
VPS52-221ENST00000495755 TMED4Q7Z7H5 227 aa5.28□□□□□ -1.56
VPS52-221ENST00000495755 TMEM217Q8N7C4 229 aa5.28□□□□□ -1.56
VPS52-221ENST00000495755 STXBP6Q8NFX7 210 aa5.28□□□□□ -1.56
VPS52-221ENST00000495755 OR1S1Q8NH92 325 aa5.28□□□□□ -1.56
VPS52-221ENST00000495755 DCANP1Q8TF63 244 aa5.28□□□□□ -1.56
VPS52-221ENST00000495755 GLMPQ8WWB7 406 aa5.28□□□□□ -1.56
VPS52-221ENST00000495755 ACY3Q96HD9 319 aa5.28□□□□□ -1.56
VPS52-221ENST00000495755 GRAMD2BQ96HH9 432 aa5.28□□□□□ -1.56
VPS52-221ENST00000495755 NARS2Q96I59 477 aaKnown RBP5.28□□□□□ -1.56
VPS52-221ENST00000495755 RABAC1Q9UI14 185 aa5.28□□□□□ -1.56
VPS52-221ENST00000495755 IGKV1D-37A0A075B6S9 117 aa5.27□□□□□ -1.57
VPS52-221ENST00000495755 NUPR2A6NF83 97 aa5.27□□□□□ -1.57
VPS52-221ENST00000495755 HELTA6NFD8 242 aa5.27□□□□□ -1.57
VPS52-221ENST00000495755 BUB3O43684 328 aa5.27□□□□□ -1.57
VPS52-221ENST00000495755 SFT2D2O95562 160 aa5.27□□□□□ -1.57
VPS52-221ENST00000495755 CA1P00915 261 aaPredicted RBP5.27□□□□□ -1.57
VPS52-221ENST00000495755 IFNA4P05014 189 aa5.27□□□□□ -1.57
VPS52-221ENST00000495755 IL4P05112 153 aa5.27□□□□□ -1.57
VPS52-221ENST00000495755 PSG1P11464 419 aa5.27□□□□□ -1.57
VPS52-221ENST00000495755 SLC25A6P12236 298 aa5.27□□□□□ -1.57
VPS52-221ENST00000495755 AP2S1P53680 142 aaPredicted RBP5.27□□□□□ -1.57
VPS52-221ENST00000495755 PPP1R1AQ13522 171 aa5.27□□□□□ -1.57
VPS52-221ENST00000495755 PMS2P11Q13670 270 aa5.27□□□□□ -1.57
VPS52-221ENST00000495755 GAMTQ14353 236 aa5.27□□□□□ -1.57
VPS52-221ENST00000495755 TRPT1Q86TN4 253 aaKnown RBP5.27□□□□□ -1.57
VPS52-221ENST00000495755 OR11H2Q8NH07 326 aa5.27□□□□□ -1.57
VPS52-221ENST00000495755 RARRES2Q99969 163 aa5.27□□□□□ -1.57
VPS52-221ENST00000495755 SRRQ9GZT4 340 aa5.27□□□□□ -1.57
VPS52-221ENST00000495755 TMED3Q9Y3Q3 217 aa5.27□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms