RNA–Protein interactions for RNA: ENST00000495630.1

TMEM53-209, Transcript of transmembrane protein 53, humanhuman

TSL 2

Gene TMEM53, Length 546 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-209ENST00000495630 PKD1P98161 4303 aa12.52□□□□□ -0.4
TMEM53-209ENST00000495630 SMIM31A0A1B0GVY4 71 aa12.52□□□□□ -0.41
TMEM53-209ENST00000495630 ZNF705FA8MVS1 300 aaPredicted RBP12.52□□□□□ -0.41
TMEM53-209ENST00000495630 IGLC1P0CG04 106 aa12.52□□□□□ -0.41
TMEM53-209ENST00000495630 ZNF705DP0CH99 300 aaPredicted RBP12.52□□□□□ -0.41
TMEM53-209ENST00000495630 ZNF705BP0CI00 300 aaPredicted RBP12.52□□□□□ -0.41
TMEM53-209ENST00000495630 RCVRNP35243 200 aa12.52□□□□□ -0.41
TMEM53-209ENST00000495630 ZNF575Q86XF7 245 aa12.52□□□□□ -0.41
TMEM53-209ENST00000495630 TP53RKQ96S44 253 aa12.52□□□□□ -0.41
TMEM53-209ENST00000495630 Q9H521 79 aa12.52□□□□□ -0.41
TMEM53-209ENST00000495630 NRN1Q9NPD7 142 aa12.52□□□□□ -0.41
TMEM53-209ENST00000495630 C3orf85A0A1B0GTC6 90 aa12.51□□□□□ -0.41
TMEM53-209ENST00000495630 TEX48A0A1B0GUV7 120 aa12.51□□□□□ -0.41
TMEM53-209ENST00000495630 PGAM2P15259 253 aa12.51□□□□□ -0.41
TMEM53-209ENST00000495630 HTR2BP41595 481 aa12.51□□□□□ -0.41
TMEM53-209ENST00000495630 NKX2-1P43699 371 aaPredicted RBP12.51□□□□□ -0.41
TMEM53-209ENST00000495630 EMP1P54849 157 aa12.51□□□□□ -0.41
TMEM53-209ENST00000495630 PIGPP57054 158 aa12.51□□□□□ -0.41
TMEM53-209ENST00000495630 DHODHQ02127 395 aa12.51□□□□□ -0.41
TMEM53-209ENST00000495630 C1orf134Q5TEV5 83 aa12.51□□□□□ -0.41
TMEM53-209ENST00000495630 RRNAD1Q96FB5 475 aaKnown RBP12.51□□□□□ -0.41
TMEM53-209ENST00000495630 RFNGQ9Y644 331 aa12.51□□□□□ -0.41
TMEM53-209ENST00000495630 BUB3O43684 328 aa12.5□□□□□ -0.41
TMEM53-209ENST00000495630 SLC25A4P12235 298 aa12.5□□□□□ -0.41
TMEM53-209ENST00000495630 HLA-DRB4P13762 266 aa12.5□□□□□ -0.41
TMEM53-209ENST00000495630 OR10J1P30954 320 aa12.5□□□□□ -0.41
TMEM53-209ENST00000495630 TGFBR1P36897 503 aa12.5□□□□□ -0.41
TMEM53-209ENST00000495630 SPCS3P61009 180 aa12.5□□□□□ -0.41
TMEM53-209ENST00000495630 NEDD8Q15843 81 aa12.5□□□□□ -0.41
TMEM53-209ENST00000495630 PRSS54Q6PEW0 395 aa12.5□□□□□ -0.41
TMEM53-209ENST00000495630 NIPSNAP3BQ9BS92 247 aa12.5□□□□□ -0.41
TMEM53-209ENST00000495630 DKK2Q9UBU2 259 aa12.5□□□□□ -0.41
TMEM53-209ENST00000495630 HLA-DRB4X5D2U9 266 aa12.5□□□□□ -0.41
TMEM53-209ENST00000495630 PI3P19957 117 aa12.49□□□□□ -0.41
TMEM53-209ENST00000495630 OXA1LQ15070 435 aa12.49□□□□□ -0.41
TMEM53-209ENST00000495630 TRIM16LQ309B1 348 aa12.49□□□□□ -0.41
TMEM53-209ENST00000495630 AARDQ4LEZ3 155 aa12.49□□□□□ -0.41
TMEM53-209ENST00000495630 OR52E5Q8NH55 327 aa12.49□□□□□ -0.41
TMEM53-209ENST00000495630 RNASEH2CQ8TDP1 164 aaKnown RBP12.49□□□□□ -0.41
TMEM53-209ENST00000495630 CLUHP3Q96NS8 147 aa12.49□□□□□ -0.41
TMEM53-209ENST00000495630 ABCA13Q86UQ4 5058 aa12.49□□□□□ -0.41
TMEM53-209ENST00000495630 M0QYG6 137 aa12.48□□□□□ -0.41
TMEM53-209ENST00000495630 GSTZ1O43708 216 aaPredicted RBP12.48□□□□□ -0.41
TMEM53-209ENST00000495630 APOA1P02647 267 aa12.48□□□□□ -0.41
TMEM53-209ENST00000495630 RND2P52198 227 aa12.48□□□□□ -0.41
TMEM53-209ENST00000495630 USF2Q15853 346 aaPredicted RBP12.48□□□□□ -0.41
TMEM53-209ENST00000495630 SP6Q3SY56 376 aa12.48□□□□□ -0.41
TMEM53-209ENST00000495630 C2orf83Q53S99 150 aa12.48□□□□□ -0.41
TMEM53-209ENST00000495630 SIGLEC15Q6ZMC9 328 aa12.48□□□□□ -0.41
TMEM53-209ENST00000495630 LHFPL1Q86WI0 220 aa12.48□□□□□ -0.41
TMEM53-209ENST00000495630 SNX29P2Q8IUI4 249 aa12.48□□□□□ -0.41
TMEM53-209ENST00000495630 CTNNBIP1Q9NSA3 81 aaPredicted RBP12.48□□□□□ -0.41
TMEM53-209ENST00000495630 PLA2G2EQ9NZK7 142 aa12.48□□□□□ -0.41
TMEM53-209ENST00000495630 B3GALNT1O75752 331 aa12.47□□□□□ -0.41
TMEM53-209ENST00000495630 IL4P05112 153 aa12.47□□□□□ -0.41
TMEM53-209ENST00000495630 RD3LP0DJH9 198 aa12.47□□□□□ -0.41
TMEM53-209ENST00000495630 UCP1P25874 307 aa12.47□□□□□ -0.41
TMEM53-209ENST00000495630 FAM222AQ5U5X8 452 aa12.47□□□□□ -0.41
TMEM53-209ENST00000495630 ETFRF1Q6IPR1 90 aa12.47□□□□□ -0.41
TMEM53-209ENST00000495630 FAM219AQ8IW50 185 aa12.47□□□□□ -0.41
TMEM53-209ENST00000495630 ZFAND1Q8TCF1 268 aa12.47□□□□□ -0.41
TMEM53-209ENST00000495630 HEYLQ9NQ87 328 aaPredicted RBP12.47□□□□□ -0.41
TMEM53-209ENST00000495630 COMMD3Q9UBI1 195 aa12.47□□□□□ -0.41
TMEM53-209ENST00000495630 IGHV3OR16-12A0A075B7B8 117 aa12.46□□□□□ -0.41
TMEM53-209ENST00000495630 A0A0G2JRQ6 117 aa12.46□□□□□ -0.41
TMEM53-209ENST00000495630 FAM3BP58499 235 aaPredicted RBP12.46□□□□□ -0.41
TMEM53-209ENST00000495630 RNASE10Q5GAN6 216 aaKnown RBP12.46□□□□□ -0.41
TMEM53-209ENST00000495630 ARRDC1Q8N5I2 433 aa12.46□□□□□ -0.41
TMEM53-209ENST00000495630 RNASE11Q8TAA1 199 aaKnown RBP12.46□□□□□ -0.41
TMEM53-209ENST00000495630 COPZ2Q9P299 210 aa12.46□□□□□ -0.41
TMEM53-209ENST00000495630 CDK2AP2O75956 126 aa12.45□□□□□ -0.42
TMEM53-209ENST00000495630 TOMM40O96008 361 aa12.45□□□□□ -0.42
TMEM53-209ENST00000495630 IGKV3-20P01619 116 aa12.45□□□□□ -0.42
TMEM53-209ENST00000495630 FXYD7P58549 80 aa12.45□□□□□ -0.42
TMEM53-209ENST00000495630 LSM3P62310 102 aaKnown RBP12.45□□□□□ -0.42
TMEM53-209ENST00000495630 GDF5OSQ5U4N7 250 aa12.45□□□□□ -0.42
TMEM53-209ENST00000495630 CCDC71LQ8N9Z2 235 aa12.45□□□□□ -0.42
TMEM53-209ENST00000495630 NPIPB3Q92617 1050 aa12.45□□□□□ -0.42
TMEM53-209ENST00000495630 SAV1Q9H4B6 383 aaPredicted RBP12.45□□□□□ -0.42
TMEM53-209ENST00000495630 PFDN2Q9UHV9 154 aa12.45□□□□□ -0.42
TMEM53-209ENST00000495630 CDS2O95674 445 aa12.44□□□□□ -0.42
TMEM53-209ENST00000495630 HTN3P15516 51 aa12.44□□□□□ -0.42
TMEM53-209ENST00000495630 NUP62P37198 522 aaPredicted RBP12.44□□□□□ -0.42
TMEM53-209ENST00000495630 ID1P41134 155 aa12.44□□□□□ -0.42
TMEM53-209ENST00000495630 SPATA31B1PQ5VZV4 182 aa12.44□□□□□ -0.42
TMEM53-209ENST00000495630 FOXI2Q6ZQN5 318 aa12.44□□□□□ -0.42
TMEM53-209ENST00000495630 NOXA1Q86UR1 476 aa12.44□□□□□ -0.42
TMEM53-209ENST00000495630 TERB2Q8NHR7 220 aa12.44□□□□□ -0.42
TMEM53-209ENST00000495630 YIPF6Q96EC8 236 aa12.44□□□□□ -0.42
TMEM53-209ENST00000495630 KLK11Q9UBX7 282 aa12.44□□□□□ -0.42
TMEM53-209ENST00000495630 GOLT1BQ9Y3E0 138 aa12.44□□□□□ -0.42
TMEM53-209ENST00000495630 C16orf90A8MZG2 172 aa12.43□□□□□ -0.42
TMEM53-209ENST00000495630 NXPH3O95157 252 aa12.43□□□□□ -0.42
TMEM53-209ENST00000495630 HBE1P02100 147 aa12.43□□□□□ -0.42
TMEM53-209ENST00000495630 PSG1P11464 419 aa12.43□□□□□ -0.42
TMEM53-209ENST00000495630 ELK1P19419 428 aa12.43□□□□□ -0.42
TMEM53-209ENST00000495630 TBPP20226 339 aa12.43□□□□□ -0.42
TMEM53-209ENST00000495630 ZNF709Q8N972 641 aa12.43□□□□□ -0.42
TMEM53-209ENST00000495630 C15orf53Q8NAA6 179 aa12.43□□□□□ -0.42
TMEM53-209ENST00000495630 SLC24A4Q8NFF2 622 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms