RNA–Protein interactions for RNA: ENST00000495010.5

VARS-228, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 1,007 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-228ENST00000495010 RFNGQ9Y644 331 aa10.18□□□□□ -0.78
VARS-228ENST00000495010 U3KQE9 123 aa10.18□□□□□ -0.78
VARS-228ENST00000495010 DNAH2Q9P225 4427 aa10.18□□□□□ -0.78
VARS-228ENST00000495010 GSTZ1O43708 216 aaPredicted RBP10.17□□□□□ -0.78
VARS-228ENST00000495010 HLA-DRB4P13762 266 aa10.17□□□□□ -0.78
VARS-228ENST00000495010 OR10J1P30954 320 aa10.17□□□□□ -0.78
VARS-228ENST00000495010 RCVRNP35243 200 aa10.17□□□□□ -0.78
VARS-228ENST00000495010 NEDD8Q15843 81 aa10.17□□□□□ -0.78
VARS-228ENST00000495010 SIGLEC15Q6ZMC9 328 aa10.17□□□□□ -0.78
VARS-228ENST00000495010 ZNF705AQ6ZN79 300 aaPredicted RBP10.17□□□□□ -0.78
VARS-228ENST00000495010 GPX8Q8TED1 209 aa10.17□□□□□ -0.78
VARS-228ENST00000495010 ZNF486Q96H40 463 aaPredicted RBP10.17□□□□□ -0.78
VARS-228ENST00000495010 TMED3Q9Y3Q3 217 aa10.17□□□□□ -0.78
VARS-228ENST00000495010 HLA-DRB4X5D2U9 266 aa10.17□□□□□ -0.78
VARS-228ENST00000495010 DNAH17Q9UFH2 4485 aa10.17□□□□□ -0.78
VARS-228ENST00000495010 C3orf85A0A1B0GTC6 90 aa10.16□□□□□ -0.78
VARS-228ENST00000495010 ZNF705FA8MVS1 300 aaPredicted RBP10.16□□□□□ -0.78
VARS-228ENST00000495010 C16orf90A8MZG2 172 aa10.16□□□□□ -0.78
VARS-228ENST00000495010 IGKV3-20P01619 116 aa10.16□□□□□ -0.78
VARS-228ENST00000495010 IL4P05112 153 aa10.16□□□□□ -0.78
VARS-228ENST00000495010 ZNF705DP0CH99 300 aaPredicted RBP10.16□□□□□ -0.78
VARS-228ENST00000495010 ZNF705BP0CI00 300 aaPredicted RBP10.16□□□□□ -0.78
VARS-228ENST00000495010 SLC25A4P12235 298 aa10.16□□□□□ -0.78
VARS-228ENST00000495010 HTR2BP41595 481 aa10.16□□□□□ -0.78
VARS-228ENST00000495010 NKX2-1P43699 371 aaPredicted RBP10.16□□□□□ -0.78
VARS-228ENST00000495010 RND2P52198 227 aa10.16□□□□□ -0.78
VARS-228ENST00000495010 PIGPP57054 158 aa10.16□□□□□ -0.78
VARS-228ENST00000495010 FXYD7P58549 80 aa10.16□□□□□ -0.78
VARS-228ENST00000495010 YPEL3P61236 119 aaPredicted RBP10.16□□□□□ -0.78
VARS-228ENST00000495010 RND3P61587 244 aa10.16□□□□□ -0.78
VARS-228ENST00000495010 DHODHQ02127 395 aa10.16□□□□□ -0.78
VARS-228ENST00000495010 FAM222AQ5U5X8 452 aa10.16□□□□□ -0.78
VARS-228ENST00000495010 SNX29P2Q8IUI4 249 aa10.16□□□□□ -0.78
VARS-228ENST00000495010 TP53RKQ96S44 253 aa10.16□□□□□ -0.78
VARS-228ENST00000495010 SCPEP1Q9HB40 452 aa10.16□□□□□ -0.78
VARS-228ENST00000495010 DKK2Q9UBU2 259 aa10.16□□□□□ -0.78
VARS-228ENST00000495010 PKHD1P08F94 4074 aa10.16□□□□□ -0.78
VARS-228ENST00000495010 M0QYG6 137 aa10.15□□□□□ -0.78
VARS-228ENST00000495010 P0C879 139 aa10.15□□□□□ -0.78
VARS-228ENST00000495010 IGLC1P0CG04 106 aa10.15□□□□□ -0.78
VARS-228ENST00000495010 PI3P19957 117 aa10.15□□□□□ -0.78
VARS-228ENST00000495010 RPS19P39019 145 aaKnown RBP10.15□□□□□ -0.78
VARS-228ENST00000495010 MAPKAPK5-AS1Q8N8E1 139 aa10.15□□□□□ -0.78
VARS-228ENST00000495010 LINC00052Q96N35 136 aa10.15□□□□□ -0.78
VARS-228ENST00000495010 C7orf50Q9BRJ6 194 aaKnown RBP10.15□□□□□ -0.78
VARS-228ENST00000495010 HEYLQ9NQ87 328 aaPredicted RBP10.15□□□□□ -0.78
VARS-228ENST00000495010 COPZ2Q9P299 210 aa10.15□□□□□ -0.78
VARS-228ENST00000495010 DNAH11Q96DT5 4516 aa10.14□□□□□ -0.79
VARS-228ENST00000495010 TGFBR1P36897 503 aa10.14□□□□□ -0.79
VARS-228ENST00000495010 ID1P41134 155 aa10.14□□□□□ -0.79
VARS-228ENST00000495010 SPCS3P61009 180 aa10.14□□□□□ -0.79
VARS-228ENST00000495010 USF2Q15853 346 aaPredicted RBP10.14□□□□□ -0.79
VARS-228ENST00000495010 BSXQ3C1V8 233 aa10.14□□□□□ -0.79
VARS-228ENST00000495010 ETFRF1Q6IPR1 90 aa10.14□□□□□ -0.79
VARS-228ENST00000495010 PRSS54Q6PEW0 395 aa10.14□□□□□ -0.79
VARS-228ENST00000495010 CCDC71LQ8N9Z2 235 aa10.14□□□□□ -0.79
VARS-228ENST00000495010 OR4B1Q8NGF8 309 aa10.14□□□□□ -0.79
VARS-228ENST00000495010 ATG101Q9BSB4 218 aa10.14□□□□□ -0.79
VARS-228ENST00000495010 PFDN2Q9UHV9 154 aa10.14□□□□□ -0.79
VARS-228ENST00000495010 GOLT1BQ9Y3E0 138 aa10.14□□□□□ -0.79
VARS-228ENST00000495010 BUB3O43684 328 aa10.13□□□□□ -0.79
VARS-228ENST00000495010 CDK2AP2O75956 126 aa10.13□□□□□ -0.79
VARS-228ENST00000495010 HBE1P02100 147 aa10.13□□□□□ -0.79
VARS-228ENST00000495010 RD3LP0DJH9 198 aa10.13□□□□□ -0.79
VARS-228ENST00000495010 NUP62P37198 522 aaPredicted RBP10.13□□□□□ -0.79
VARS-228ENST00000495010 FAM3BP58499 235 aaPredicted RBP10.13□□□□□ -0.79
VARS-228ENST00000495010 DAD1P61803 113 aa10.13□□□□□ -0.79
VARS-228ENST00000495010 OXA1LQ15070 435 aa10.13□□□□□ -0.79
VARS-228ENST00000495010 SP6Q3SY56 376 aa10.13□□□□□ -0.79
VARS-228ENST00000495010 TMEM88Q6PEY1 159 aa10.13□□□□□ -0.79
VARS-228ENST00000495010 COQ8AQ8NI60 647 aa10.13□□□□□ -0.79
VARS-228ENST00000495010 RNASEH2CQ8TDP1 164 aaKnown RBP10.13□□□□□ -0.79
VARS-228ENST00000495010 CTNNBIP1Q9NSA3 81 aaPredicted RBP10.13□□□□□ -0.79
VARS-228ENST00000495010 COMMD3Q9UBI1 195 aa10.13□□□□□ -0.79
VARS-228ENST00000495010 CEBPZOSA8MTT3 80 aa10.12□□□□□ -0.79
VARS-228ENST00000495010 TOMM40O96008 361 aa10.12□□□□□ -0.79
VARS-228ENST00000495010 LSM3P62310 102 aaKnown RBP10.12□□□□□ -0.79
VARS-228ENST00000495010 C2orf83Q53S99 150 aa10.12□□□□□ -0.79
VARS-228ENST00000495010 RNASE10Q5GAN6 216 aaKnown RBP10.12□□□□□ -0.79
VARS-228ENST00000495010 GDF5OSQ5U4N7 250 aa10.12□□□□□ -0.79
VARS-228ENST00000495010 GSG1LQ6UXU4 331 aa10.12□□□□□ -0.79
VARS-228ENST00000495010 FOXI2Q6ZQN5 318 aa10.12□□□□□ -0.79
VARS-228ENST00000495010 FAM219AQ8IW50 185 aa10.12□□□□□ -0.79
VARS-228ENST00000495010 C15orf53Q8NAA6 179 aa10.12□□□□□ -0.79
VARS-228ENST00000495010 OR52E5Q8NH55 327 aa10.12□□□□□ -0.79
VARS-228ENST00000495010 ZFAND1Q8TCF1 268 aa10.12□□□□□ -0.79
VARS-228ENST00000495010 ACY3Q96HD9 319 aa10.12□□□□□ -0.79
VARS-228ENST00000495010 SAV1Q9H4B6 383 aaPredicted RBP10.12□□□□□ -0.79
VARS-228ENST00000495010 YTHDF2Q9Y5A9 579 aaKnown RBP10.12□□□□□ -0.79
VARS-228ENST00000495010 PKD1P98161 4303 aa10.12□□□□□ -0.79
VARS-228ENST00000495010 DYNC1H1Q14204 4646 aaKnown RBP10.11□□□□□ -0.79
VARS-228ENST00000495010 LOC102723971A0A1B0GUV8 181 aa10.11□□□□□ -0.79
VARS-228ENST00000495010 B3GALNT1O75752 331 aa10.11□□□□□ -0.79
VARS-228ENST00000495010 APOA1P02647 267 aa10.11□□□□□ -0.79
VARS-228ENST00000495010 RRN3P1Q2M238 152 aa10.11□□□□□ -0.79
VARS-228ENST00000495010 EBLN2Q6P2I7 272 aa10.11□□□□□ -0.79
VARS-228ENST00000495010 NOXA1Q86UR1 476 aa10.11□□□□□ -0.79
VARS-228ENST00000495010 SLC24A4Q8NFF2 622 aa10.11□□□□□ -0.79
VARS-228ENST00000495010 OR51G1Q8NGK1 321 aa10.11□□□□□ -0.79
VARS-228ENST00000495010 NPIPB3Q92617 1050 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms