RNA–Protein interactions for RNA: ENST00000494815.1

TSPAN4-212, Transcript of tetraspanin 4, humanhuman

TSL 2

Gene TSPAN4, Length 2,187 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-212ENST00000494815 NDUFB4O95168 129 aa14.87□□□□□ -0.03
TSPAN4-212ENST00000494815 CA2P00918 260 aa14.87□□□□□ -0.03
TSPAN4-212ENST00000494815 UBE2G2P60604 165 aa14.87□□□□□ -0.03
TSPAN4-212ENST00000494815 RBX1P62877 108 aa14.87□□□□□ -0.03
TSPAN4-212ENST00000494815 SFRP2Q96HF1 295 aa14.87□□□□□ -0.03
TSPAN4-212ENST00000494815 DERL1Q9BUN8 251 aa14.87□□□□□ -0.03
TSPAN4-212ENST00000494815 ZNF430Q9H8G1 570 aaPredicted RBP14.87□□□□□ -0.03
TSPAN4-212ENST00000494815 AURKAIP1Q9NWT8 199 aaPredicted RBP14.87□□□□□ -0.03
TSPAN4-212ENST00000494815 NDUFS8O00217 210 aa14.87□□□□□ -0.03
TSPAN4-212ENST00000494815 MPDU1O75352 247 aa14.87□□□□□ -0.03
TSPAN4-212ENST00000494815 RPLP1P05386 114 aaKnown RBP14.87□□□□□ -0.03
TSPAN4-212ENST00000494815 SRSF1Q07955 248 aaKnown RBP eCLIP14.87□□□□□ -0.03
TSPAN4-212ENST00000494815 CST9LP1Q5W188 147 aa14.87□□□□□ -0.03
TSPAN4-212ENST00000494815 VMO1Q7Z5L0 202 aa14.87□□□□□ -0.03
TSPAN4-212ENST00000494815 RITA1Q96K30 269 aa14.87□□□□□ -0.03
TSPAN4-212ENST00000494815 SIRPDQ9H106 197 aa14.87□□□□□ -0.03
TSPAN4-212ENST00000494815 A0A1B0GUS0 222 aa14.86□□□□□ -0.03
TSPAN4-212ENST00000494815 A0A1W2PN81 502 aa14.86□□□□□ -0.03
TSPAN4-212ENST00000494815 NUPR1O60356 82 aa14.86□□□□□ -0.03
TSPAN4-212ENST00000494815 FOXH1O75593 365 aa14.86□□□□□ -0.03
TSPAN4-212ENST00000494815 LDLRAD2Q5SZI1 272 aa14.86□□□□□ -0.03
TSPAN4-212ENST00000494815 ZNF114Q8NC26 417 aa14.86□□□□□ -0.03
TSPAN4-212ENST00000494815 SGMS2Q8NHU3 365 aa14.86□□□□□ -0.03
TSPAN4-212ENST00000494815 PIMREGQ9BSJ6 248 aa14.86□□□□□ -0.03
TSPAN4-212ENST00000494815 MDFIC2A0A1B0GVS7 189 aa14.85□□□□□ -0.03
TSPAN4-212ENST00000494815 ADMP35318 185 aa14.85□□□□□ -0.03
TSPAN4-212ENST00000494815 YPEL3P61236 119 aaPredicted RBP14.85□□□□□ -0.03
TSPAN4-212ENST00000494815 KLRD1Q13241 179 aa14.85□□□□□ -0.03
TSPAN4-212ENST00000494815 C2orf83Q53S99 150 aa14.85□□□□□ -0.03
TSPAN4-212ENST00000494815 FAM168AQ92567 244 aa14.85□□□□□ -0.03
TSPAN4-212ENST00000494815 TXNDC17Q9BRA2 123 aa14.85□□□□□ -0.03
TSPAN4-212ENST00000494815 FNDC10F2Z333 226 aa14.85□□□□□ -0.03
TSPAN4-212ENST00000494815 CRYGBP07316 175 aa14.85□□□□□ -0.03
TSPAN4-212ENST00000494815 ARSJQ5FYB0 599 aaPredicted RBP14.85□□□□□ -0.03
TSPAN4-212ENST00000494815 MRPL52Q86TS9 123 aaKnown RBP14.85□□□□□ -0.03
TSPAN4-212ENST00000494815 MMD2Q8IY49 270 aa14.85□□□□□ -0.03
TSPAN4-212ENST00000494815 LRRK2Q5S007 2527 aa14.85□□□□□ -0.03
TSPAN4-212ENST00000494815 A0A1W2PPV4 95 aa14.84□□□□□ -0.03
TSPAN4-212ENST00000494815 TIMM23O14925 209 aa14.84□□□□□ -0.03
TSPAN4-212ENST00000494815 COX6B1P14854 86 aa14.84□□□□□ -0.03
TSPAN4-212ENST00000494815 ERHP84090 104 aaKnown RBP14.84□□□□□ -0.03
TSPAN4-212ENST00000494815 PSG5Q15238 335 aa14.84□□□□□ -0.03
TSPAN4-212ENST00000494815 GCSAMLQ5JQS6 135 aa14.84□□□□□ -0.03
TSPAN4-212ENST00000494815 CMTM2Q8TAZ6 248 aa14.84□□□□□ -0.03
TSPAN4-212ENST00000494815 PGPEP1LA6NFU8 196 aa14.84□□□□□ -0.03
TSPAN4-212ENST00000494815 ZNF705FA8MVS1 300 aaPredicted RBP14.84□□□□□ -0.03
TSPAN4-212ENST00000494815 OOSP1A8MZH6 123 aa14.84□□□□□ -0.03
TSPAN4-212ENST00000494815 ZNF705DP0CH99 300 aaPredicted RBP14.84□□□□□ -0.03
TSPAN4-212ENST00000494815 ZNF705BP0CI00 300 aaPredicted RBP14.84□□□□□ -0.03
TSPAN4-212ENST00000494815 HOXB4P17483 251 aaPredicted RBP14.84□□□□□ -0.03
TSPAN4-212ENST00000494815 ATP5J2P56134 94 aa14.84□□□□□ -0.03
TSPAN4-212ENST00000494815 SELENOTP62341 195 aa14.84□□□□□ -0.03
TSPAN4-212ENST00000494815 MRGPRG-AS1Q2M3A8 158 aa14.84□□□□□ -0.03
TSPAN4-212ENST00000494815 MINOS1Q5TGZ0 78 aa14.84□□□□□ -0.03
TSPAN4-212ENST00000494815 TREML4Q6UXN2 200 aa14.84□□□□□ -0.03
TSPAN4-212ENST00000494815 C10orf105Q8TEF2 133 aa14.84□□□□□ -0.03
TSPAN4-212ENST00000494815 TBX15Q96SF7 602 aa14.84□□□□□ -0.03
TSPAN4-212ENST00000494815 MINOS1-NBL1R4GNA1 71 aa14.84□□□□□ -0.03
TSPAN4-212ENST00000494815 TACC2O95359 2948 aa14.83□□□□□ -0.03
TSPAN4-212ENST00000494815 FAM208BQ5VWN6 2430 aa14.83□□□□□ -0.04
TSPAN4-212ENST00000494815 M0QZK8 103 aa14.83□□□□□ -0.04
TSPAN4-212ENST00000494815 RNASE2P10153 161 aaKnown RBP14.83□□□□□ -0.04
TSPAN4-212ENST00000494815 CLEC2AQ6UVW9 174 aa14.83□□□□□ -0.04
TSPAN4-212ENST00000494815 OR10W1Q8NGF6 305 aa14.83□□□□□ -0.04
TSPAN4-212ENST00000494815 NPVFQ9HCQ7 196 aa14.83□□□□□ -0.04
TSPAN4-212ENST00000494815 TPSG1Q9NRR2 321 aa14.83□□□□□ -0.04
TSPAN4-212ENST00000494815 SIGLEC9Q9Y336 463 aa14.83□□□□□ -0.04
TSPAN4-212ENST00000494815 TRBV20OR9-2A0A075B6H5 130 aa14.83□□□□□ -0.04
TSPAN4-212ENST00000494815 TMEM11P17152 192 aa14.83□□□□□ -0.04
TSPAN4-212ENST00000494815 CCDC144NLQ6NUI1 221 aa14.83□□□□□ -0.04
TSPAN4-212ENST00000494815 CFHR4Q92496 578 aa14.83□□□□□ -0.04
TSPAN4-212ENST00000494815 CGB1A6NKQ9 187 aa14.82□□□□□ -0.04
TSPAN4-212ENST00000494815 TOX4O94842 621 aa14.82□□□□□ -0.04
TSPAN4-212ENST00000494815 TPPP2P59282 170 aa14.82□□□□□ -0.04
TSPAN4-212ENST00000494815 PAFAH1B2P68402 229 aa14.82□□□□□ -0.04
TSPAN4-212ENST00000494815 LHFPL4Q7Z7J7 247 aa14.82□□□□□ -0.04
TSPAN4-212ENST00000494815 C22orf15Q8WYQ4 148 aa14.82□□□□□ -0.04
TSPAN4-212ENST00000494815 LSM4Q9Y4Z0 139 aaKnown RBP14.82□□□□□ -0.04
TSPAN4-212ENST00000494815 HILPDAQ9Y5L2 63 aa14.82□□□□□ -0.04
TSPAN4-212ENST00000494815 TRAV9-1A0A075B6T8 112 aa14.81□□□□□ -0.04
TSPAN4-212ENST00000494815 VWC2LB2RUY7 222 aa14.81□□□□□ -0.04
TSPAN4-212ENST00000494815 E7EUB6 86 aa14.81□□□□□ -0.04
TSPAN4-212ENST00000494815 ACTL6BO94805 426 aa14.81□□□□□ -0.04
TSPAN4-212ENST00000494815 OPRK1P41145 380 aa14.81□□□□□ -0.04
TSPAN4-212ENST00000494815 RPL29P47914 159 aaKnown RBP14.81□□□□□ -0.04
TSPAN4-212ENST00000494815 C10orf55Q5SWW7 151 aa14.81□□□□□ -0.04
TSPAN4-212ENST00000494815 PPP1R27Q86WC6 154 aa14.81□□□□□ -0.04
TSPAN4-212ENST00000494815 KMT2BQ9UMN6 2715 aaPredicted RBP14.81□□□□□ -0.04
TSPAN4-212ENST00000494815 MED13LQ71F56 2210 aa14.81□□□□□ -0.04
TSPAN4-212ENST00000494815 STAG3L2P0CL84 134 aa14.81□□□□□ -0.04
TSPAN4-212ENST00000494815 STAG3L3P0CL85 134 aa14.81□□□□□ -0.04
TSPAN4-212ENST00000494815 ARL14EPLP0DKL9 152 aa14.81□□□□□ -0.04
TSPAN4-212ENST00000494815 ESDP10768 282 aa14.81□□□□□ -0.04
TSPAN4-212ENST00000494815 CNTFRP26992 372 aa14.81□□□□□ -0.04
TSPAN4-212ENST00000494815 LGALS4P56470 323 aa14.81□□□□□ -0.04
TSPAN4-212ENST00000494815 TEX43Q6ZNM6 134 aa14.81□□□□□ -0.04
TSPAN4-212ENST00000494815 OR10G8Q8NGN5 311 aa14.81□□□□□ -0.04
TSPAN4-212ENST00000494815 C20orf144Q9BQM9 153 aa14.81□□□□□ -0.04
TSPAN4-212ENST00000494815 TP53TG3Q9ULZ0 132 aa14.81□□□□□ -0.04
TSPAN4-212ENST00000494815 WNK2Q9Y3S1 2297 aa14.8□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms