RNA–Protein interactions for RNA: ENST00000494464.5

ERCC3-209, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 1 (best)

Gene ERCC3, Length 1,367 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-209ENST00000494464 PEF1Q9UBV8 284 aaKnown RBP10.11□□□□□ -0.79
ERCC3-209ENST00000494464 NPIPB5A8MRT5 1133 aa10.1□□□□□ -0.79
ERCC3-209ENST00000494464 ZNF705EA8MWA4 302 aaPredicted RBP10.1□□□□□ -0.79
ERCC3-209ENST00000494464 IL6RP08887 468 aaPredicted RBP10.1□□□□□ -0.79
ERCC3-209ENST00000494464 RPL8P62917 257 aaKnown RBP10.1□□□□□ -0.79
ERCC3-209ENST00000494464 RHOGP84095 191 aa10.1□□□□□ -0.79
ERCC3-209ENST00000494464 FAM209BQ5JX69 171 aa10.1□□□□□ -0.79
ERCC3-209ENST00000494464 OR4A47Q6IF82 309 aa10.1□□□□□ -0.79
ERCC3-209ENST00000494464 OR4C12Q96R67 309 aa10.1□□□□□ -0.79
ERCC3-209ENST00000494464 ELOVL1Q9BW60 279 aa10.1□□□□□ -0.79
ERCC3-209ENST00000494464 TMEM14BQ9NUH8 114 aa10.1□□□□□ -0.79
ERCC3-209ENST00000494464 STRAPQ9Y3F4 350 aaKnown RBP10.1□□□□□ -0.79
ERCC3-209ENST00000494464 A0A1B0GW64 132 aa10.09□□□□□ -0.79
ERCC3-209ENST00000494464 RAB19A4D1S5 217 aa10.09□□□□□ -0.79
ERCC3-209ENST00000494464 CEBPZOSA8MTT3 80 aa10.09□□□□□ -0.79
ERCC3-209ENST00000494464 UMAD1C9J7I0 102 aa10.09□□□□□ -0.79
ERCC3-209ENST00000494464 IFNA5P01569 189 aa10.09□□□□□ -0.79
ERCC3-209ENST00000494464 METTL15P1P0C7V9 234 aa10.09□□□□□ -0.79
ERCC3-209ENST00000494464 ATP6V0CP27449 155 aa10.09□□□□□ -0.79
ERCC3-209ENST00000494464 OR2B8PP59922 312 aa10.09□□□□□ -0.79
ERCC3-209ENST00000494464 RPP30P78346 268 aaKnown RBP10.09□□□□□ -0.79
ERCC3-209ENST00000494464 KLF5Q13887 457 aaPredicted RBP10.09□□□□□ -0.79
ERCC3-209ENST00000494464 ATP6V1FQ16864 119 aa10.09□□□□□ -0.79
ERCC3-209ENST00000494464 SPANXN5Q5MJ07 72 aa10.09□□□□□ -0.79
ERCC3-209ENST00000494464 UQCC3Q6UW78 93 aa10.09□□□□□ -0.79
ERCC3-209ENST00000494464 IL34Q6ZMJ4 242 aa10.09□□□□□ -0.79
ERCC3-209ENST00000494464 SSX9Q7RTT3 188 aa10.09□□□□□ -0.79
ERCC3-209ENST00000494464 HAPLN4Q86UW8 402 aa10.09□□□□□ -0.79
ERCC3-209ENST00000494464 TMEM217Q8N7C4 229 aa10.09□□□□□ -0.79
ERCC3-209ENST00000494464 HSD17B11Q8NBQ5 300 aa10.09□□□□□ -0.79
ERCC3-209ENST00000494464 NECAP1Q8NC96 275 aa10.09□□□□□ -0.79
ERCC3-209ENST00000494464 PLA2G2EQ9NZK7 142 aa10.09□□□□□ -0.79
ERCC3-209ENST00000494464 PRNDQ9UKY0 176 aa10.09□□□□□ -0.79
ERCC3-209ENST00000494464 E7EUB6 86 aa10.08□□□□□ -0.8
ERCC3-209ENST00000494464 IGLV1-51P01701 117 aa10.08□□□□□ -0.8
ERCC3-209ENST00000494464 TRBV12-3P01733 135 aa10.08□□□□□ -0.8
ERCC3-209ENST00000494464 PRH1P02810 166 aa10.08□□□□□ -0.8
ERCC3-209ENST00000494464 CRYGCP07315 174 aa10.08□□□□□ -0.8
ERCC3-209ENST00000494464 KLK9Q2XQG4 91 aa10.08□□□□□ -0.8
ERCC3-209ENST00000494464 PXDC1Q5TGL8 231 aa10.08□□□□□ -0.8
ERCC3-209ENST00000494464 OR9G4Q8NGQ1 327 aa10.08□□□□□ -0.8
ERCC3-209ENST00000494464 LYPD6BQ8NI32 183 aa10.08□□□□□ -0.8
ERCC3-209ENST00000494464 PINX1Q96BK5 328 aaKnown RBP10.08□□□□□ -0.8
ERCC3-209ENST00000494464 KLK9Q9UKQ9 250 aa10.08□□□□□ -0.8
ERCC3-209ENST00000494464 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP10.07□□□□□ -0.8
ERCC3-209ENST00000494464 PMS2P5A8MQ11 134 aa10.07□□□□□ -0.8
ERCC3-209ENST00000494464 UPK2O00526 184 aa10.07□□□□□ -0.8
ERCC3-209ENST00000494464 IFNA17P01571 189 aa10.07□□□□□ -0.8
ERCC3-209ENST00000494464 GP9P14770 177 aa10.07□□□□□ -0.8
ERCC3-209ENST00000494464 CTRB1P17538 263 aa10.07□□□□□ -0.8
ERCC3-209ENST00000494464 SYNJ2BPP57105 145 aa10.07□□□□□ -0.8
ERCC3-209ENST00000494464 ATP5G2Q06055 141 aa10.07□□□□□ -0.8
ERCC3-209ENST00000494464 SLC38A11Q08AI6 406 aa10.07□□□□□ -0.8
ERCC3-209ENST00000494464 ARL16Q0P5N6 197 aa10.07□□□□□ -0.8
ERCC3-209ENST00000494464 RPEL1Q2QD12 228 aa10.07□□□□□ -0.8
ERCC3-209ENST00000494464 VWC2Q2TAL6 325 aa10.07□□□□□ -0.8
ERCC3-209ENST00000494464 CTRB2Q6GPI1 263 aa10.07□□□□□ -0.8
ERCC3-209ENST00000494464 Q6ZRG5 221 aa10.07□□□□□ -0.8
ERCC3-209ENST00000494464 LILRB2Q8N423 598 aa10.07□□□□□ -0.8
ERCC3-209ENST00000494464 MARC2Q969Z3 335 aa10.07□□□□□ -0.8
ERCC3-209ENST00000494464 SRSF8Q9BRL6 282 aaKnown RBP10.07□□□□□ -0.8
ERCC3-209ENST00000494464 PSMG3Q9BT73 122 aaPredicted RBP10.07□□□□□ -0.8
ERCC3-209ENST00000494464 TMEM147Q9BVK8 224 aa10.07□□□□□ -0.8
ERCC3-209ENST00000494464 SH3BGRL3Q9H299 93 aa10.07□□□□□ -0.8
ERCC3-209ENST00000494464 FKBP11Q9NYL4 201 aa10.07□□□□□ -0.8
ERCC3-209ENST00000494464 SIGLEC8Q9NYZ4 499 aa10.07□□□□□ -0.8
ERCC3-209ENST00000494464 SMAD5-AS1Q9Y6J3 95 aa10.07□□□□□ -0.8
ERCC3-209ENST00000494464 SORL1Q92673 2214 aa10.07□□□□□ -0.8
ERCC3-209ENST00000494464 TRAV3A0A0B4J244 114 aa10.06□□□□□ -0.8
ERCC3-209ENST00000494464 CGB1A6NKQ9 187 aa10.06□□□□□ -0.8
ERCC3-209ENST00000494464 C15orf62A8K5M9 175 aa10.06□□□□□ -0.8
ERCC3-209ENST00000494464 KRBOX1C9JBD0 128 aa10.06□□□□□ -0.8
ERCC3-209ENST00000494464 BMPR1BO00238 502 aa10.06□□□□□ -0.8
ERCC3-209ENST00000494464 OR2J3O76001 311 aa10.06□□□□□ -0.8
ERCC3-209ENST00000494464 NHLRC4P0CG21 123 aaPredicted RBP10.06□□□□□ -0.8
ERCC3-209ENST00000494464 AREGP15514 252 aa10.06□□□□□ -0.8
ERCC3-209ENST00000494464 HSPE1P61604 102 aaKnown RBP10.06□□□□□ -0.8
ERCC3-209ENST00000494464 C15orf32Q32M92 178 aa10.06□□□□□ -0.8
ERCC3-209ENST00000494464 BTNL8Q6UX41 500 aa10.06□□□□□ -0.8
ERCC3-209ENST00000494464 DPPA3Q6W0C5 159 aa10.06□□□□□ -0.8
ERCC3-209ENST00000494464 HIPK2Q9H2X6 1198 aa10.06□□□□□ -0.8
ERCC3-209ENST00000494464 TEX46H3BTG2 121 aa10.05□□□□□ -0.8
ERCC3-209ENST00000494464 MYOD1P15172 320 aa10.05□□□□□ -0.8
ERCC3-209ENST00000494464 HIST1H1BP16401 226 aaKnown RBP10.05□□□□□ -0.8
ERCC3-209ENST00000494464 HOXA1P49639 335 aaPredicted RBP10.05□□□□□ -0.8
ERCC3-209ENST00000494464 SLC25A24Q6NUK1 477 aa10.05□□□□□ -0.8
ERCC3-209ENST00000494464 TMEM182Q6ZP80 229 aaPredicted RBP10.05□□□□□ -0.8
ERCC3-209ENST00000494464 C19orf35Q6ZS72 473 aa10.05□□□□□ -0.8
ERCC3-209ENST00000494464 OR10P1Q8NGE3 313 aa10.05□□□□□ -0.8
ERCC3-209ENST00000494464 OR2G3Q8NGZ4 309 aa10.05□□□□□ -0.8
ERCC3-209ENST00000494464 OR5B3Q8NH48 314 aa10.05□□□□□ -0.8
ERCC3-209ENST00000494464 SCGB1C1Q8TD33 95 aa10.05□□□□□ -0.8
ERCC3-209ENST00000494464 FANCD2OSQ96PS1 177 aa10.05□□□□□ -0.8
ERCC3-209ENST00000494464 COMMD5Q9GZQ3 224 aa10.05□□□□□ -0.8
ERCC3-209ENST00000494464 WDR61Q9GZS3 305 aaKnown RBP10.05□□□□□ -0.8
ERCC3-209ENST00000494464 TIMM9Q9Y5J7 89 aa10.05□□□□□ -0.8
ERCC3-209ENST00000494464 IGLV11-55A0A075B6I3 123 aa10.04□□□□□ -0.8
ERCC3-209ENST00000494464 IGLC7A0M8Q6 106 aa10.04□□□□□ -0.8
ERCC3-209ENST00000494464 CAMLGP49069 296 aa10.04□□□□□ -0.8
ERCC3-209ENST00000494464 ATP5IP56385 69 aaPredicted RBP10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms