RNA–Protein interactions for RNA: ENST00000493952.2

SATB1-217, Transcript of SATB homeobox 1, humanhuman

TSL 3 BASIC

Gene SATB1, Length 626 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SATB1-217ENST00000493952 SLC16A13Q7RTY0 426 aa12.09□□□□□ -0.47
SATB1-217ENST00000493952 OR1S2Q8NGQ3 325 aa12.09□□□□□ -0.47
SATB1-217ENST00000493952 MITD1Q8WV92 249 aa12.09□□□□□ -0.47
SATB1-217ENST00000493952 ACY3Q96HD9 319 aa12.09□□□□□ -0.47
SATB1-217ENST00000493952 RNF2Q99496 336 aa12.09□□□□□ -0.47
SATB1-217ENST00000493952 SPAG8Q99932 426 aaPredicted RBP12.09□□□□□ -0.47
SATB1-217ENST00000493952 WDR12Q9GZL7 423 aaKnown RBP12.09□□□□□ -0.47
SATB1-217ENST00000493952 TUBA4BQ9H853 241 aa12.09□□□□□ -0.47
SATB1-217ENST00000493952 NUDT15Q9NV35 164 aa12.09□□□□□ -0.47
SATB1-217ENST00000493952 SCGB2A1O75556 95 aa12.08□□□□□ -0.48
SATB1-217ENST00000493952 MED6O75586 246 aa12.08□□□□□ -0.48
SATB1-217ENST00000493952 APOHP02749 345 aaPredicted RBP12.08□□□□□ -0.48
SATB1-217ENST00000493952 IFNA4P05014 189 aa12.08□□□□□ -0.48
SATB1-217ENST00000493952 ATP5IP56385 69 aaPredicted RBP12.08□□□□□ -0.48
SATB1-217ENST00000493952 NPIPB3Q92617 1050 aa12.08□□□□□ -0.48
SATB1-217ENST00000493952 FAM240BA0A1B0GVZ2 78 aa12.07□□□□□ -0.48
SATB1-217ENST00000493952 WRBO00258 174 aa12.07□□□□□ -0.48
SATB1-217ENST00000493952 UPK1BO75841 260 aa12.07□□□□□ -0.48
SATB1-217ENST00000493952 IFNA21P01568 189 aa12.07□□□□□ -0.48
SATB1-217ENST00000493952 OR10J1P30954 320 aa12.07□□□□□ -0.48
SATB1-217ENST00000493952 ID3Q02535 119 aa12.07□□□□□ -0.48
SATB1-217ENST00000493952 ASAH1Q13510 395 aa12.07□□□□□ -0.48
SATB1-217ENST00000493952 OR4D5Q8NGN0 318 aa12.07□□□□□ -0.48
SATB1-217ENST00000493952 ST8SIA2Q92186 375 aa12.07□□□□□ -0.48
SATB1-217ENST00000493952 CIB3Q96Q77 187 aaPredicted RBP12.07□□□□□ -0.48
SATB1-217ENST00000493952 TM2D3Q9BRN9 247 aa12.07□□□□□ -0.48
SATB1-217ENST00000493952 SRD5A3Q9H8P0 318 aa12.07□□□□□ -0.48
SATB1-217ENST00000493952 H2AFB2P0C5Z0 115 aa12.06□□□□□ -0.48
SATB1-217ENST00000493952 YPEL3P61236 119 aaPredicted RBP12.06□□□□□ -0.48
SATB1-217ENST00000493952 RAB11AP62491 216 aa12.06□□□□□ -0.48
SATB1-217ENST00000493952 IFITM3Q01628 133 aa12.06□□□□□ -0.48
SATB1-217ENST00000493952 HAGHQ16775 308 aa12.06□□□□□ -0.48
SATB1-217ENST00000493952 FAM90A2PQ658T7 463 aa12.06□□□□□ -0.48
SATB1-217ENST00000493952 MZT2BQ6NZ67 158 aa12.06□□□□□ -0.48
SATB1-217ENST00000493952 LINC00322Q6ZN03 302 aaPredicted RBP12.06□□□□□ -0.48
SATB1-217ENST00000493952 SEC22CQ9BRL7 303 aa12.06□□□□□ -0.48
SATB1-217ENST00000493952 VSIRQ9H7M9 311 aa12.06□□□□□ -0.48
SATB1-217ENST00000493952 PAIP2BQ9ULR5 123 aaKnown RBP12.06□□□□□ -0.48
SATB1-217ENST00000493952 STAB2Q8WWQ8 2551 aa12.05□□□□□ -0.48
SATB1-217ENST00000493952 IGHV3-66A0A0C4DH42 116 aa12.05□□□□□ -0.48
SATB1-217ENST00000493952 RBMY1BA6NDE4 496 aaKnown RBP12.05□□□□□ -0.48
SATB1-217ENST00000493952 RBMY1EA6NEQ0 496 aaKnown RBP12.05□□□□□ -0.48
SATB1-217ENST00000493952 OR4C46A6NHA9 309 aa12.05□□□□□ -0.48
SATB1-217ENST00000493952 H3BP45 60 aa12.05□□□□□ -0.48
SATB1-217ENST00000493952 RBMY1DP0C7P1 496 aaKnown RBP12.05□□□□□ -0.48
SATB1-217ENST00000493952 GPX4P36969 197 aaPredicted RBP12.05□□□□□ -0.48
SATB1-217ENST00000493952 NKX2-1P43699 371 aaPredicted RBP12.05□□□□□ -0.48
SATB1-217ENST00000493952 POLR2GP62487 172 aaKnown RBP eCLIP12.05□□□□□ -0.48
SATB1-217ENST00000493952 GAMTQ14353 236 aa12.05□□□□□ -0.48
SATB1-217ENST00000493952 TCF24Q7RTU0 167 aa12.05□□□□□ -0.48
SATB1-217ENST00000493952 LILRB2Q8N423 598 aa12.05□□□□□ -0.48
SATB1-217ENST00000493952 SLC35E1Q96K37 410 aa12.05□□□□□ -0.48
SATB1-217ENST00000493952 RCHY1Q96PM5 261 aa12.05□□□□□ -0.48
SATB1-217ENST00000493952 UBQLN2Q9UHD9 624 aa12.05□□□□□ -0.48
SATB1-217ENST00000493952 IGKV3-7A0A075B6H7 116 aa12.04□□□□□ -0.48
SATB1-217ENST00000493952 PRSS46E5RG02 174 aa12.04□□□□□ -0.48
SATB1-217ENST00000493952 CCSO14618 274 aa12.04□□□□□ -0.48
SATB1-217ENST00000493952 NPPCP23582 126 aa12.04□□□□□ -0.48
SATB1-217ENST00000493952 CRYBB3P26998 211 aa12.04□□□□□ -0.48
SATB1-217ENST00000493952 BMI1P35226 326 aa12.04□□□□□ -0.48
SATB1-217ENST00000493952 IAH1Q2TAA2 248 aaPredicted RBP12.04□□□□□ -0.48
SATB1-217ENST00000493952 ODF3L2Q3SX64 289 aa12.04□□□□□ -0.48
SATB1-217ENST00000493952 SPANXN5Q5MJ07 72 aa12.04□□□□□ -0.48
SATB1-217ENST00000493952 ZNF431Q8TF32 576 aaPredicted RBP12.04□□□□□ -0.48
SATB1-217ENST00000493952 Q8WTZ3 238 aa12.04□□□□□ -0.48
SATB1-217ENST00000493952 WWC2-AS2Q96NR7 200 aa12.04□□□□□ -0.48
SATB1-217ENST00000493952 METTL26Q96S19 204 aa12.04□□□□□ -0.48
SATB1-217ENST00000493952 ZMAT4Q9H898 229 aa12.04□□□□□ -0.48
SATB1-217ENST00000493952 SSSCA1O60232 199 aa12.03□□□□□ -0.48
SATB1-217ENST00000493952 TOMM40O96008 361 aa12.03□□□□□ -0.48
SATB1-217ENST00000493952 TFPI2P48307 235 aa12.03□□□□□ -0.48
SATB1-217ENST00000493952 RPP30P78346 268 aaKnown RBP12.03□□□□□ -0.48
SATB1-217ENST00000493952 USF2Q15853 346 aaPredicted RBP12.03□□□□□ -0.48
SATB1-217ENST00000493952 ZBTB8BQ8NAP8 495 aaPredicted RBP12.03□□□□□ -0.48
SATB1-217ENST00000493952 CITED4Q96RK1 184 aa12.03□□□□□ -0.48
SATB1-217ENST00000493952 IGKV1D-37A0A075B6S9 117 aa12.02□□□□□ -0.49
SATB1-217ENST00000493952 DFFBO76075 338 aa12.02□□□□□ -0.49
SATB1-217ENST00000493952 SCGB1D2O95969 90 aa12.02□□□□□ -0.49
SATB1-217ENST00000493952 IL4P05112 153 aa12.02□□□□□ -0.49
SATB1-217ENST00000493952 PSG1P11464 419 aa12.02□□□□□ -0.49
SATB1-217ENST00000493952 GBGT1Q8N5D6 347 aa12.02□□□□□ -0.49
SATB1-217ENST00000493952 C12orf45Q8N5I9 185 aaPredicted RBP12.02□□□□□ -0.49
SATB1-217ENST00000493952 ENKURQ8TC29 256 aa12.02□□□□□ -0.49
SATB1-217ENST00000493952 SPATA25Q9BR10 227 aa12.02□□□□□ -0.49
SATB1-217ENST00000493952 TMEM231Q9H6L2 316 aa12.02□□□□□ -0.49
SATB1-217ENST00000493952 PSENENQ9NZ42 101 aa12.02□□□□□ -0.49
SATB1-217ENST00000493952 GSKIPQ9P0R6 139 aa12.02□□□□□ -0.49
SATB1-217ENST00000493952 STRAPQ9Y3F4 350 aaKnown RBP12.02□□□□□ -0.49
SATB1-217ENST00000493952 A0A1W2PS18 150 aa12.01□□□□□ -0.49
SATB1-217ENST00000493952 ZFP92A6NM28 416 aa12.01□□□□□ -0.49
SATB1-217ENST00000493952 CD5P06127 495 aa12.01□□□□□ -0.49
SATB1-217ENST00000493952 RD3LP0DJH9 198 aa12.01□□□□□ -0.49
SATB1-217ENST00000493952 P2RY1P47900 373 aa12.01□□□□□ -0.49
SATB1-217ENST00000493952 PAX9P55771 341 aa12.01□□□□□ -0.49
SATB1-217ENST00000493952 ZNF90Q03938 601 aa12.01□□□□□ -0.49
SATB1-217ENST00000493952 RCL1Q9Y2P8 373 aaKnown RBP12.01□□□□□ -0.49
SATB1-217ENST00000493952 U3KQE9 123 aa12.01□□□□□ -0.49
SATB1-217ENST00000493952 IGKV1OR2-108A0A075B7D4 117 aa12□□□□□ -0.49
SATB1-217ENST00000493952 HNRNPCP07910 306 aaKnown RBP eCLIP12□□□□□ -0.49
SATB1-217ENST00000493952 NRARPQ7Z6K4 114 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms