RNA–Protein interactions for RNA: ENST00000493949.1

PDLIM1-205, Transcript of PDZ and LIM domain 1, humanhuman

TSL 3

Gene PDLIM1, Length 795 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-205ENST00000493949 ZNF816Q0VGE8 651 aaPredicted RBP8.57□□□□□ -1.04
PDLIM1-205ENST00000493949 ADIPOQQ15848 244 aa8.57□□□□□ -1.04
PDLIM1-205ENST00000493949 VHLLQ6RSH7 139 aa8.57□□□□□ -1.04
PDLIM1-205ENST00000493949 ZNF705AQ6ZN79 300 aaPredicted RBP8.57□□□□□ -1.04
PDLIM1-205ENST00000493949 Q6ZWC4 215 aa8.57□□□□□ -1.04
PDLIM1-205ENST00000493949 WDR86Q86TI4 376 aa8.57□□□□□ -1.04
PDLIM1-205ENST00000493949 MDP1Q86V88 176 aa8.57□□□□□ -1.04
PDLIM1-205ENST00000493949 BAGE3Q86Y29 109 aa8.57□□□□□ -1.04
PDLIM1-205ENST00000493949 BAGE2Q86Y30 109 aa8.57□□□□□ -1.04
PDLIM1-205ENST00000493949 BATF2Q8N1L9 274 aa8.57□□□□□ -1.04
PDLIM1-205ENST00000493949 TMEM256Q8N2U0 113 aa8.57□□□□□ -1.04
PDLIM1-205ENST00000493949 OR1L6Q8NGR2 347 aa8.57□□□□□ -1.04
PDLIM1-205ENST00000493949 EAF1Q96JC9 268 aaPredicted RBP8.57□□□□□ -1.04
PDLIM1-205ENST00000493949 OR2J1Q9GZK6 312 aa8.57□□□□□ -1.04
PDLIM1-205ENST00000493949 OBP2BQ9NPH6 170 aa8.57□□□□□ -1.04
PDLIM1-205ENST00000493949 AURKAIP1Q9NWT8 199 aaPredicted RBP8.57□□□□□ -1.04
PDLIM1-205ENST00000493949 FOXA2Q9Y261 457 aaPredicted RBP8.57□□□□□ -1.04
PDLIM1-205ENST00000493949 ZNF257Q9Y2Q1 563 aa8.57□□□□□ -1.04
PDLIM1-205ENST00000493949 TRBV20OR9-2A0A075B6H5 130 aa8.56□□□□□ -1.04
PDLIM1-205ENST00000493949 A0A1W2PRE2 83 aa8.56□□□□□ -1.04
PDLIM1-205ENST00000493949 ZNF503-AS2A6NEH8 195 aa8.56□□□□□ -1.04
PDLIM1-205ENST00000493949 FCN1O00602 326 aa8.56□□□□□ -1.04
PDLIM1-205ENST00000493949 WNT9BO14905 357 aa8.56□□□□□ -1.04
PDLIM1-205ENST00000493949 SERF1AO75920 110 aa8.56□□□□□ -1.04
PDLIM1-205ENST00000493949 AMY1AP04745 511 aa8.56□□□□□ -1.04
PDLIM1-205ENST00000493949 GPX1P07203 203 aa8.56□□□□□ -1.04
PDLIM1-205ENST00000493949 RNASE1P07998 156 aaKnown RBP8.56□□□□□ -1.04
PDLIM1-205ENST00000493949 CFHR2P36980 270 aa8.56□□□□□ -1.04
PDLIM1-205ENST00000493949 GPR12P47775 334 aa8.56□□□□□ -1.04
PDLIM1-205ENST00000493949 LMO4P61968 165 aa8.56□□□□□ -1.04
PDLIM1-205ENST00000493949 RPL31P62899 125 aaKnown RBP8.56□□□□□ -1.04
PDLIM1-205ENST00000493949 HLA-DRB5Q30154 266 aa8.56□□□□□ -1.04
PDLIM1-205ENST00000493949 TIGITQ495A1 244 aa8.56□□□□□ -1.04
PDLIM1-205ENST00000493949 ACP7Q6ZNF0 438 aa8.56□□□□□ -1.04
PDLIM1-205ENST00000493949 FAM231DQ6ZW35 169 aa8.56□□□□□ -1.04
PDLIM1-205ENST00000493949 MMD2Q8IY49 270 aa8.56□□□□□ -1.04
PDLIM1-205ENST00000493949 PRR18Q8N4B5 295 aa8.56□□□□□ -1.04
PDLIM1-205ENST00000493949 OCC1Q8TAD7 63 aa8.56□□□□□ -1.04
PDLIM1-205ENST00000493949 GATAD1Q8WUU5 269 aa8.56□□□□□ -1.04
PDLIM1-205ENST00000493949 ORAOV1Q8WV07 137 aa8.56□□□□□ -1.04
PDLIM1-205ENST00000493949 MGST2Q99735 147 aa8.56□□□□□ -1.04
PDLIM1-205ENST00000493949 HSPB9Q9BQS6 159 aa8.56□□□□□ -1.04
PDLIM1-205ENST00000493949 PATZ1Q9HBE1 687 aaKnown RBP8.56□□□□□ -1.04
PDLIM1-205ENST00000493949 HEYLQ9NQ87 328 aaPredicted RBP8.56□□□□□ -1.04
PDLIM1-205ENST00000493949 MRPS16Q9Y3D3 137 aaKnown RBP8.56□□□□□ -1.04
PDLIM1-205ENST00000493949 BIRC6Q9NR09 4857 aa8.55□□□□□ -1.04
PDLIM1-205ENST00000493949 IGHV1-18A0A0C4DH31 117 aa8.55□□□□□ -1.04
PDLIM1-205ENST00000493949 SCO2A0A1W2PP80 73 aa8.55□□□□□ -1.04
PDLIM1-205ENST00000493949 C15orf61A6NNL5 157 aa8.55□□□□□ -1.04
PDLIM1-205ENST00000493949 SNURFLB1AK76 121 aa8.55□□□□□ -1.04
PDLIM1-205ENST00000493949 J3QLI3 93 aa8.55□□□□□ -1.04
PDLIM1-205ENST00000493949 M0QZ24 198 aa8.55□□□□□ -1.04
PDLIM1-205ENST00000493949 F2RL2O00254 374 aa8.55□□□□□ -1.04
PDLIM1-205ENST00000493949 CCL2P13500 99 aa8.55□□□□□ -1.04
PDLIM1-205ENST00000493949 CTRLP40313 264 aa8.55□□□□□ -1.04
PDLIM1-205ENST00000493949 GNG4P50150 75 aa8.55□□□□□ -1.04
PDLIM1-205ENST00000493949 EDDM3BP56851 147 aa8.55□□□□□ -1.04
PDLIM1-205ENST00000493949 BRWD1-AS2P59051 145 aa8.55□□□□□ -1.04
PDLIM1-205ENST00000493949 RPS20P60866 119 aaKnown RBP8.55□□□□□ -1.04
PDLIM1-205ENST00000493949 SUMO1P63165 101 aaKnown RBP8.55□□□□□ -1.04
PDLIM1-205ENST00000493949 GCSAMQ8N6F7 178 aa8.55□□□□□ -1.04
PDLIM1-205ENST00000493949 FAM169BQ8N8A8 192 aa8.55□□□□□ -1.04
PDLIM1-205ENST00000493949 C5orf30Q96GV9 206 aa8.55□□□□□ -1.04
PDLIM1-205ENST00000493949 ENY2Q9NPA8 101 aa8.55□□□□□ -1.04
PDLIM1-205ENST00000493949 TECRQ9NZ01 308 aaKnown RBP8.55□□□□□ -1.04
PDLIM1-205ENST00000493949 C1RLQ9NZP8 487 aa8.55□□□□□ -1.04
PDLIM1-205ENST00000493949 TBL2Q9Y4P3 447 aaKnown RBP8.55□□□□□ -1.04
PDLIM1-205ENST00000493949 V9GYV3 84 aa8.55□□□□□ -1.04
PDLIM1-205ENST00000493949 PLXNB1O43157 2135 aa8.54□□□□□ -1.04
PDLIM1-205ENST00000493949 TRAV38-1A0A0B4J264 116 aa8.54□□□□□ -1.04
PDLIM1-205ENST00000493949 SMIM27A0A1W2PRY6 76 aa8.54□□□□□ -1.04
PDLIM1-205ENST00000493949 DNAJC9-AS1A6NH13 148 aa8.54□□□□□ -1.04
PDLIM1-205ENST00000493949 C15orf65H3BRN8 121 aa8.54□□□□□ -1.04
PDLIM1-205ENST00000493949 MGST3O14880 152 aa8.54□□□□□ -1.04
PDLIM1-205ENST00000493949 PSPNO60542 156 aa8.54□□□□□ -1.04
PDLIM1-205ENST00000493949 CRYAAP02489 173 aa8.54□□□□□ -1.04
PDLIM1-205ENST00000493949 NPY1RP25929 384 aa8.54□□□□□ -1.04
PDLIM1-205ENST00000493949 GABRA2P47869 451 aa8.54□□□□□ -1.04
PDLIM1-205ENST00000493949 LINC00310P59036 64 aa8.54□□□□□ -1.04
PDLIM1-205ENST00000493949 UBE2G2P60604 165 aa8.54□□□□□ -1.04
PDLIM1-205ENST00000493949 MORN2Q502X0 79 aa8.54□□□□□ -1.04
PDLIM1-205ENST00000493949 ATP5L2Q7Z4Y8 100 aa8.54□□□□□ -1.04
PDLIM1-205ENST00000493949 LRP11Q86VZ4 500 aa8.54□□□□□ -1.04
PDLIM1-205ENST00000493949 SLC24A4Q8NFF2 622 aa8.54□□□□□ -1.04
PDLIM1-205ENST00000493949 OR52L2PQ8NGH6 319 aa8.54□□□□□ -1.04
PDLIM1-205ENST00000493949 WFDC12Q8WWY7 111 aa8.54□□□□□ -1.04
PDLIM1-205ENST00000493949 COQ2Q96H96 371 aa8.54□□□□□ -1.04
PDLIM1-205ENST00000493949 S1PR3Q99500 378 aa8.54□□□□□ -1.04
PDLIM1-205ENST00000493949 CITED1Q99966 193 aa8.54□□□□□ -1.04
PDLIM1-205ENST00000493949 MS4A5Q9H3V2 200 aa8.54□□□□□ -1.04
PDLIM1-205ENST00000493949 MSL2Q9HCI7 577 aa8.54□□□□□ -1.04
PDLIM1-205ENST00000493949 PRNDQ9UKY0 176 aa8.54□□□□□ -1.04
PDLIM1-205ENST00000493949 TP53TG3Q9ULZ0 132 aa8.54□□□□□ -1.04
PDLIM1-205ENST00000493949 SOX21Q9Y651 276 aaPredicted RBP8.54□□□□□ -1.04
PDLIM1-205ENST00000493949 DOCK11Q5JSL3 2073 aa8.53□□□□□ -1.04
PDLIM1-205ENST00000493949 A0A1B0GUS0 222 aa8.53□□□□□ -1.04
PDLIM1-205ENST00000493949 HELTA6NFD8 242 aa8.53□□□□□ -1.04
PDLIM1-205ENST00000493949 LINC00473A8K010 186 aa8.53□□□□□ -1.04
PDLIM1-205ENST00000493949 DIRC3C9JPN6 131 aa8.53□□□□□ -1.04
PDLIM1-205ENST00000493949 INS-IGF2F8WCM5 200 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 93 ms