RNA–Protein interactions for RNA: ENST00000493949.1

PDLIM1-205, Transcript of PDZ and LIM domain 1, humanhuman

TSL 3

Gene PDLIM1, Length 795 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-205ENST00000493949 ZNF816Q0VGE8 651 aaPredicted RBP8.57□□□□□ -1.04
PDLIM1-205ENST00000493949 ADIPOQQ15848 244 aa8.57□□□□□ -1.04
PDLIM1-205ENST00000493949 VHLLQ6RSH7 139 aa8.57□□□□□ -1.04
PDLIM1-205ENST00000493949 ZNF705AQ6ZN79 300 aaPredicted RBP8.57□□□□□ -1.04
PDLIM1-205ENST00000493949 Q6ZWC4 215 aa8.57□□□□□ -1.04
PDLIM1-205ENST00000493949 WDR86Q86TI4 376 aa8.57□□□□□ -1.04
PDLIM1-205ENST00000493949 MDP1Q86V88 176 aa8.57□□□□□ -1.04
PDLIM1-205ENST00000493949 BAGE3Q86Y29 109 aa8.57□□□□□ -1.04
PDLIM1-205ENST00000493949 BAGE2Q86Y30 109 aa8.57□□□□□ -1.04
PDLIM1-205ENST00000493949 BATF2Q8N1L9 274 aa8.57□□□□□ -1.04
PDLIM1-205ENST00000493949 TMEM256Q8N2U0 113 aa8.57□□□□□ -1.04
PDLIM1-205ENST00000493949 OR1L6Q8NGR2 347 aa8.57□□□□□ -1.04
PDLIM1-205ENST00000493949 EAF1Q96JC9 268 aaPredicted RBP8.57□□□□□ -1.04
PDLIM1-205ENST00000493949 OR2J1Q9GZK6 312 aa8.57□□□□□ -1.04
PDLIM1-205ENST00000493949 OBP2BQ9NPH6 170 aa8.57□□□□□ -1.04
PDLIM1-205ENST00000493949 AURKAIP1Q9NWT8 199 aaPredicted RBP8.57□□□□□ -1.04
PDLIM1-205ENST00000493949 FOXA2Q9Y261 457 aaPredicted RBP8.57□□□□□ -1.04
PDLIM1-205ENST00000493949 ZNF257Q9Y2Q1 563 aa8.57□□□□□ -1.04
PDLIM1-205ENST00000493949 TRBV20OR9-2A0A075B6H5 130 aa8.56□□□□□ -1.04
PDLIM1-205ENST00000493949 A0A1W2PRE2 83 aa8.56□□□□□ -1.04
PDLIM1-205ENST00000493949 ZNF503-AS2A6NEH8 195 aa8.56□□□□□ -1.04
PDLIM1-205ENST00000493949 FCN1O00602 326 aa8.56□□□□□ -1.04
PDLIM1-205ENST00000493949 WNT9BO14905 357 aa8.56□□□□□ -1.04
PDLIM1-205ENST00000493949 SERF1AO75920 110 aa8.56□□□□□ -1.04
PDLIM1-205ENST00000493949 AMY1AP04745 511 aa8.56□□□□□ -1.04
PDLIM1-205ENST00000493949 GPX1P07203 203 aa8.56□□□□□ -1.04
PDLIM1-205ENST00000493949 RNASE1P07998 156 aaKnown RBP8.56□□□□□ -1.04
PDLIM1-205ENST00000493949 CFHR2P36980 270 aa8.56□□□□□ -1.04
PDLIM1-205ENST00000493949 GPR12P47775 334 aa8.56□□□□□ -1.04
PDLIM1-205ENST00000493949 LMO4P61968 165 aa8.56□□□□□ -1.04
PDLIM1-205ENST00000493949 RPL31P62899 125 aaKnown RBP8.56□□□□□ -1.04
PDLIM1-205ENST00000493949 HLA-DRB5Q30154 266 aa8.56□□□□□ -1.04
PDLIM1-205ENST00000493949 TIGITQ495A1 244 aa8.56□□□□□ -1.04
PDLIM1-205ENST00000493949 ACP7Q6ZNF0 438 aa8.56□□□□□ -1.04
PDLIM1-205ENST00000493949 FAM231DQ6ZW35 169 aa8.56□□□□□ -1.04
PDLIM1-205ENST00000493949 MMD2Q8IY49 270 aa8.56□□□□□ -1.04
PDLIM1-205ENST00000493949 PRR18Q8N4B5 295 aa8.56□□□□□ -1.04
PDLIM1-205ENST00000493949 OCC1Q8TAD7 63 aa8.56□□□□□ -1.04
PDLIM1-205ENST00000493949 GATAD1Q8WUU5 269 aa8.56□□□□□ -1.04
PDLIM1-205ENST00000493949 ORAOV1Q8WV07 137 aa8.56□□□□□ -1.04
PDLIM1-205ENST00000493949 MGST2Q99735 147 aa8.56□□□□□ -1.04
PDLIM1-205ENST00000493949 HSPB9Q9BQS6 159 aa8.56□□□□□ -1.04
PDLIM1-205ENST00000493949 PATZ1Q9HBE1 687 aaKnown RBP8.56□□□□□ -1.04
PDLIM1-205ENST00000493949 HEYLQ9NQ87 328 aaPredicted RBP8.56□□□□□ -1.04
PDLIM1-205ENST00000493949 MRPS16Q9Y3D3 137 aaKnown RBP8.56□□□□□ -1.04
PDLIM1-205ENST00000493949 BIRC6Q9NR09 4857 aa8.55□□□□□ -1.04
PDLIM1-205ENST00000493949 IGHV1-18A0A0C4DH31 117 aa8.55□□□□□ -1.04
PDLIM1-205ENST00000493949 SCO2A0A1W2PP80 73 aa8.55□□□□□ -1.04
PDLIM1-205ENST00000493949 C15orf61A6NNL5 157 aa8.55□□□□□ -1.04
PDLIM1-205ENST00000493949 SNURFLB1AK76 121 aa8.55□□□□□ -1.04
PDLIM1-205ENST00000493949 J3QLI3 93 aa8.55□□□□□ -1.04
PDLIM1-205ENST00000493949 M0QZ24 198 aa8.55□□□□□ -1.04
PDLIM1-205ENST00000493949 F2RL2O00254 374 aa8.55□□□□□ -1.04
PDLIM1-205ENST00000493949 CCL2P13500 99 aa8.55□□□□□ -1.04
PDLIM1-205ENST00000493949 CTRLP40313 264 aa8.55□□□□□ -1.04
PDLIM1-205ENST00000493949 GNG4P50150 75 aa8.55□□□□□ -1.04
PDLIM1-205ENST00000493949 EDDM3BP56851 147 aa8.55□□□□□ -1.04
PDLIM1-205ENST00000493949 BRWD1-AS2P59051 145 aa8.55□□□□□ -1.04
PDLIM1-205ENST00000493949 RPS20P60866 119 aaKnown RBP8.55□□□□□ -1.04
PDLIM1-205ENST00000493949 SUMO1P63165 101 aaKnown RBP8.55□□□□□ -1.04
PDLIM1-205ENST00000493949 GCSAMQ8N6F7 178 aa8.55□□□□□ -1.04
PDLIM1-205ENST00000493949 FAM169BQ8N8A8 192 aa8.55□□□□□ -1.04
PDLIM1-205ENST00000493949 C5orf30Q96GV9 206 aa8.55□□□□□ -1.04
PDLIM1-205ENST00000493949 ENY2Q9NPA8 101 aa8.55□□□□□ -1.04
PDLIM1-205ENST00000493949 TECRQ9NZ01 308 aaKnown RBP8.55□□□□□ -1.04
PDLIM1-205ENST00000493949 C1RLQ9NZP8 487 aa8.55□□□□□ -1.04
PDLIM1-205ENST00000493949 TBL2Q9Y4P3 447 aaKnown RBP8.55□□□□□ -1.04
PDLIM1-205ENST00000493949 V9GYV3 84 aa8.55□□□□□ -1.04
PDLIM1-205ENST00000493949 PLXNB1O43157 2135 aa8.54□□□□□ -1.04
PDLIM1-205ENST00000493949 TRAV38-1A0A0B4J264 116 aa8.54□□□□□ -1.04
PDLIM1-205ENST00000493949 SMIM27A0A1W2PRY6 76 aa8.54□□□□□ -1.04
PDLIM1-205ENST00000493949 DNAJC9-AS1A6NH13 148 aa8.54□□□□□ -1.04
PDLIM1-205ENST00000493949 C15orf65H3BRN8 121 aa8.54□□□□□ -1.04
PDLIM1-205ENST00000493949 MGST3O14880 152 aa8.54□□□□□ -1.04
PDLIM1-205ENST00000493949 PSPNO60542 156 aa8.54□□□□□ -1.04
PDLIM1-205ENST00000493949 CRYAAP02489 173 aa8.54□□□□□ -1.04
PDLIM1-205ENST00000493949 NPY1RP25929 384 aa8.54□□□□□ -1.04
PDLIM1-205ENST00000493949 GABRA2P47869 451 aa8.54□□□□□ -1.04
PDLIM1-205ENST00000493949 LINC00310P59036 64 aa8.54□□□□□ -1.04
PDLIM1-205ENST00000493949 UBE2G2P60604 165 aa8.54□□□□□ -1.04
PDLIM1-205ENST00000493949 MORN2Q502X0 79 aa8.54□□□□□ -1.04
PDLIM1-205ENST00000493949 ATP5L2Q7Z4Y8 100 aa8.54□□□□□ -1.04
PDLIM1-205ENST00000493949 LRP11Q86VZ4 500 aa8.54□□□□□ -1.04
PDLIM1-205ENST00000493949 SLC24A4Q8NFF2 622 aa8.54□□□□□ -1.04
PDLIM1-205ENST00000493949 OR52L2PQ8NGH6 319 aa8.54□□□□□ -1.04
PDLIM1-205ENST00000493949 WFDC12Q8WWY7 111 aa8.54□□□□□ -1.04
PDLIM1-205ENST00000493949 COQ2Q96H96 371 aa8.54□□□□□ -1.04
PDLIM1-205ENST00000493949 S1PR3Q99500 378 aa8.54□□□□□ -1.04
PDLIM1-205ENST00000493949 CITED1Q99966 193 aa8.54□□□□□ -1.04
PDLIM1-205ENST00000493949 MS4A5Q9H3V2 200 aa8.54□□□□□ -1.04
PDLIM1-205ENST00000493949 MSL2Q9HCI7 577 aa8.54□□□□□ -1.04
PDLIM1-205ENST00000493949 PRNDQ9UKY0 176 aa8.54□□□□□ -1.04
PDLIM1-205ENST00000493949 TP53TG3Q9ULZ0 132 aa8.54□□□□□ -1.04
PDLIM1-205ENST00000493949 SOX21Q9Y651 276 aaPredicted RBP8.54□□□□□ -1.04
PDLIM1-205ENST00000493949 DOCK11Q5JSL3 2073 aa8.53□□□□□ -1.04
PDLIM1-205ENST00000493949 A0A1B0GUS0 222 aa8.53□□□□□ -1.04
PDLIM1-205ENST00000493949 HELTA6NFD8 242 aa8.53□□□□□ -1.04
PDLIM1-205ENST00000493949 LINC00473A8K010 186 aa8.53□□□□□ -1.04
PDLIM1-205ENST00000493949 DIRC3C9JPN6 131 aa8.53□□□□□ -1.04
PDLIM1-205ENST00000493949 INS-IGF2F8WCM5 200 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 91.8 ms