RNA–Protein interactions for RNA: ENST00000493377.1

SYCP1-208, Transcript of synaptonemal complex protein 1, humanhuman

TSL 3

Gene SYCP1, Length 783 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYCP1-208ENST00000493377 ZNF25P17030 456 aaPredicted RBP0.03□□□□□ -2.4
SYCP1-208ENST00000493377 EFNA4P52798 201 aa0.03□□□□□ -2.4
SYCP1-208ENST00000493377 TCL1AP56279 114 aa0.03□□□□□ -2.4
SYCP1-208ENST00000493377 PSG9Q00887 426 aa0.03□□□□□ -2.4
SYCP1-208ENST00000493377 CIRBPQ14011 172 aaKnown RBP0.03□□□□□ -2.4
SYCP1-208ENST00000493377 DEFB113Q30KQ7 82 aa0.03□□□□□ -2.4
SYCP1-208ENST00000493377 LINC01554Q52M75 96 aa0.03□□□□□ -2.4
SYCP1-208ENST00000493377 RNASE10Q5GAN6 216 aaKnown RBP0.03□□□□□ -2.4
SYCP1-208ENST00000493377 BPIFA4PQ86YQ2 179 aa0.03□□□□□ -2.4
SYCP1-208ENST00000493377 TEX47Q8TBZ9 253 aa0.03□□□□□ -2.4
SYCP1-208ENST00000493377 PATE1Q8WXA2 126 aa0.03□□□□□ -2.4
SYCP1-208ENST00000493377 BORCS5Q969J3 196 aa0.03□□□□□ -2.4
SYCP1-208ENST00000493377 PRRT1Q99946 306 aa0.03□□□□□ -2.4
SYCP1-208ENST00000493377 LLPHQ9BRT6 129 aaKnown RBP0.03□□□□□ -2.4
SYCP1-208ENST00000493377 KRTAP2-4Q9BYR9 128 aa0.03□□□□□ -2.4
SYCP1-208ENST00000493377 KRTAP2-1Q9BYU5 128 aa0.03□□□□□ -2.4
SYCP1-208ENST00000493377 DRC3Q9H069 523 aa0.03□□□□□ -2.4
SYCP1-208ENST00000493377 CDC42SE1Q9NRR8 79 aa0.03□□□□□ -2.4
SYCP1-208ENST00000493377 CMTM6Q9NX76 183 aa0.03□□□□□ -2.4
SYCP1-208ENST00000493377 NKIRAS1Q9NYS0 192 aa0.03□□□□□ -2.4
SYCP1-208ENST00000493377 SLC35A3Q9Y2D2 325 aa0.03□□□□□ -2.4
SYCP1-208ENST00000493377 CHCHD2Q9Y6H1 151 aaPredicted RBP0.03□□□□□ -2.4
SYCP1-208ENST00000493377 PTPRFP10586 1907 aa0.03□□□□□ -2.41
SYCP1-208ENST00000493377 FANCMQ8IYD8 2048 aa0.03□□□□□ -2.41
SYCP1-208ENST00000493377 HECW2Q9P2P5 1572 aa0.02□□□□□ -2.41
SYCP1-208ENST00000493377 HECW1Q76N89 1606 aa0.02□□□□□ -2.41
SYCP1-208ENST00000493377 FAT4Q6V0I7 4981 aa0.02□□□□□ -2.41
SYCP1-208ENST00000493377 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP0.02□□□□□ -2.41
SYCP1-208ENST00000493377 CCL25O15444 150 aa0.02□□□□□ -2.41
SYCP1-208ENST00000493377 CCL16O15467 120 aa0.02□□□□□ -2.41
SYCP1-208ENST00000493377 NUPR1O60356 82 aa0.02□□□□□ -2.41
SYCP1-208ENST00000493377 TTRP02766 147 aa0.02□□□□□ -2.41
SYCP1-208ENST00000493377 CALB1P05937 261 aa0.02□□□□□ -2.41
SYCP1-208ENST00000493377 SERPINA6P08185 405 aa0.02□□□□□ -2.41
SYCP1-208ENST00000493377 OR4E1P0C645 316 aa0.02□□□□□ -2.41
SYCP1-208ENST00000493377 MGST1P10620 155 aaKnown RBP0.02□□□□□ -2.41
SYCP1-208ENST00000493377 CASQ1P31415 396 aa0.02□□□□□ -2.41
SYCP1-208ENST00000493377 RPL5P46777 297 aaKnown RBP0.02□□□□□ -2.41
SYCP1-208ENST00000493377 RPS20P60866 119 aaKnown RBP0.02□□□□□ -2.41
SYCP1-208ENST00000493377 SPCS3P61009 180 aa0.02□□□□□ -2.41
SYCP1-208ENST00000493377 YPEL3P61236 119 aaPredicted RBP0.02□□□□□ -2.41
SYCP1-208ENST00000493377 LINC00322Q6ZN03 302 aaPredicted RBP0.02□□□□□ -2.41
SYCP1-208ENST00000493377 TRAPPC6BQ86SZ2 158 aa0.02□□□□□ -2.41
SYCP1-208ENST00000493377 OR51D1Q8NGF3 324 aa0.02□□□□□ -2.41
SYCP1-208ENST00000493377 GPR146Q96CH1 333 aa0.02□□□□□ -2.41
SYCP1-208ENST00000493377 C2orf50Q96LR7 162 aa0.02□□□□□ -2.41
SYCP1-208ENST00000493377 PPP1R2P1Q96PQ5 205 aa0.02□□□□□ -2.41
SYCP1-208ENST00000493377 C14orf132Q9NPU4 83 aa0.02□□□□□ -2.41
SYCP1-208ENST00000493377 OSTCQ9NRP0 149 aa0.02□□□□□ -2.41
SYCP1-208ENST00000493377 PLAC8Q9NZF1 115 aa0.02□□□□□ -2.41
SYCP1-208ENST00000493377 MYO3BQ8WXR4 1341 aa0.02□□□□□ -2.41
SYCP1-208ENST00000493377 ZGRF1Q86YA3 2104 aa0.02□□□□□ -2.41
SYCP1-208ENST00000493377 PHRF1Q9P1Y6 1649 aaKnown RBP0.02□□□□□ -2.41
SYCP1-208ENST00000493377 KIF1BO60333 1816 aa0.01□□□□□ -2.41
SYCP1-208ENST00000493377 ASH1LQ9NR48 2969 aaKnown RBP0.01□□□□□ -2.41
SYCP1-208ENST00000493377 TRAV26-2A0A0B4J265 109 aa0.01□□□□□ -2.41
SYCP1-208ENST00000493377 A0A0D9SG42 100 aa0.01□□□□□ -2.41
SYCP1-208ENST00000493377 TRBV6-4A0A1B0GX49 114 aa0.01□□□□□ -2.41
SYCP1-208ENST00000493377 K7EIL1 84 aa0.01□□□□□ -2.41
SYCP1-208ENST00000493377 CETN3O15182 167 aa0.01□□□□□ -2.41
SYCP1-208ENST00000493377 ZNF682O95780 498 aa0.01□□□□□ -2.41
SYCP1-208ENST00000493377 DHFRP00374 187 aa0.01□□□□□ -2.41
SYCP1-208ENST00000493377 RBP1P09455 135 aa0.01□□□□□ -2.41
SYCP1-208ENST00000493377 SULT1A1P50225 295 aa0.01□□□□□ -2.41
SYCP1-208ENST00000493377 NKX2-5P52952 324 aaPredicted RBP0.01□□□□□ -2.41
SYCP1-208ENST00000493377 TSNQ15631 228 aaKnown RBP0.01□□□□□ -2.41
SYCP1-208ENST00000493377 ESRGQ1W209 222 aa0.01□□□□□ -2.41
SYCP1-208ENST00000493377 IAH1Q2TAA2 248 aaPredicted RBP0.01□□□□□ -2.41
SYCP1-208ENST00000493377 HIST2H3PS2Q5TEC6 136 aa0.01□□□□□ -2.41
SYCP1-208ENST00000493377 TEX261Q6UWH6 196 aa0.01□□□□□ -2.41
SYCP1-208ENST00000493377 LINC00575Q6W349 94 aa0.01□□□□□ -2.41
SYCP1-208ENST00000493377 GRINAQ7Z429 371 aa0.01□□□□□ -2.41
SYCP1-208ENST00000493377 OR6V1Q8N148 313 aa0.01□□□□□ -2.41
SYCP1-208ENST00000493377 ANKRD29Q8N6D5 301 aa0.01□□□□□ -2.41
SYCP1-208ENST00000493377 PLPP5Q8NEB5 264 aa0.01□□□□□ -2.41
SYCP1-208ENST00000493377 OR52R1Q8NGF1 315 aa0.01□□□□□ -2.41
SYCP1-208ENST00000493377 OR8D4Q8NGM9 314 aa0.01□□□□□ -2.41
SYCP1-208ENST00000493377 DNAJC9Q8WXX5 260 aa0.01□□□□□ -2.41
SYCP1-208ENST00000493377 ADAT3Q96EY9 351 aaPredicted RBP0.01□□□□□ -2.41
SYCP1-208ENST00000493377 SPRR2GQ9BYE4 73 aa0.01□□□□□ -2.41
SYCP1-208ENST00000493377 MRPS26Q9BYN8 205 aaKnown RBP0.01□□□□□ -2.41
SYCP1-208ENST00000493377 GUCA1BQ9UMX6 200 aa0.01□□□□□ -2.41
SYCP1-208ENST00000493377 CYSLTR1Q9Y271 337 aa0.01□□□□□ -2.41
SYCP1-208ENST00000493377 U3KQ87 197 aa0.01□□□□□ -2.41
SYCP1-208ENST00000493377 ROBO3Q96MS0 1386 aa0.01□□□□□ -2.41
SYCP1-208ENST00000493377 TNS3Q68CZ2 1445 aa0.01□□□□□ -2.41
SYCP1-208ENST00000493377 UBR2Q8IWV8 1755 aa0.01□□□□□ -2.41
SYCP1-208ENST00000493377 MYLKQ15746 1914 aa0.01□□□□□ -2.41
SYCP1-208ENST00000493377 SPTBP11277 2137 aa0.01□□□□□ -2.41
SYCP1-208ENST00000493377 ZDBF2Q9HCK1 2354 aa0.01□□□□□ -2.41
SYCP1-208ENST00000493377 MAST4O15021 2626 aa0□□□□□ -2.41
SYCP1-208ENST00000493377 A0A087X0T9 212 aa0□□□□□ -2.41
SYCP1-208ENST00000493377 TGIF2-C20orf24A0A0A6YYL0 155 aa0□□□□□ -2.41
SYCP1-208ENST00000493377 IGHV1-58A0A0C4DH39 117 aa0□□□□□ -2.41
SYCP1-208ENST00000493377 CCDC160A6NGH7 325 aa0□□□□□ -2.41
SYCP1-208ENST00000493377 OR4C46A6NHA9 309 aa0□□□□□ -2.41
SYCP1-208ENST00000493377 RIMBP3CA6NJZ7 1639 aa0□□□□□ -2.41
SYCP1-208ENST00000493377 RIMBP3BA6NNM3 1639 aa0□□□□□ -2.41
SYCP1-208ENST00000493377 KDM6AO15550 1401 aaPredicted RBP0□□□□□ -2.41
SYCP1-208ENST00000493377 CHP2O43745 196 aa0□□□□□ -2.41
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms