RNA–Protein interactions for RNA: ENST00000492896.1

SMARCC1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 4

Gene SMARCC1, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-208ENST00000492896 MBD6Q96DN6 1003 aa7.22□□□□□ -1.25
SMARCC1-208ENST00000492896 TVP23CQ96ET8 276 aa7.22□□□□□ -1.25
SMARCC1-208ENST00000492896 HSPB9Q9BQS6 159 aa7.22□□□□□ -1.25
SMARCC1-208ENST00000492896 C20orf24Q9BUV8 137 aa7.22□□□□□ -1.25
SMARCC1-208ENST00000492896 DNAJC4Q9NNZ3 241 aa7.22□□□□□ -1.25
SMARCC1-208ENST00000492896 RPS10P5Q9NQ39 176 aa7.22□□□□□ -1.25
SMARCC1-208ENST00000492896 THYN1Q9P016 225 aa7.22□□□□□ -1.25
SMARCC1-208ENST00000492896 ARL2-SNX15V9GYD0 113 aa7.22□□□□□ -1.25
SMARCC1-208ENST00000492896 KMT2BQ9UMN6 2715 aaPredicted RBP7.22□□□□□ -1.25
SMARCC1-208ENST00000492896 SPG11Q96JI7 2443 aa7.21□□□□□ -1.25
SMARCC1-208ENST00000492896 ELOA3CA0A087WX78 387 aaPredicted RBP7.21□□□□□ -1.26
SMARCC1-208ENST00000492896 C7orf77A4D0Y5 90 aa7.21□□□□□ -1.26
SMARCC1-208ENST00000492896 ZNF727A8MUV8 499 aa7.21□□□□□ -1.26
SMARCC1-208ENST00000492896 RNF223E7ERA6 249 aa7.21□□□□□ -1.26
SMARCC1-208ENST00000492896 ATP6V0E1O15342 81 aa7.21□□□□□ -1.26
SMARCC1-208ENST00000492896 NUPL2O15504 423 aaKnown RBP7.21□□□□□ -1.26
SMARCC1-208ENST00000492896 PDE6DO43924 150 aa7.21□□□□□ -1.26
SMARCC1-208ENST00000492896 OR7C2O60412 319 aa7.21□□□□□ -1.26
SMARCC1-208ENST00000492896 CLN5O75503 358 aa7.21□□□□□ -1.26
SMARCC1-208ENST00000492896 IGLC1P0CG04 106 aa7.21□□□□□ -1.26
SMARCC1-208ENST00000492896 EGR2P11161 476 aaPredicted RBP7.21□□□□□ -1.26
SMARCC1-208ENST00000492896 HIST1H1BP16401 226 aaKnown RBP7.21□□□□□ -1.26
SMARCC1-208ENST00000492896 PNRC1Q12796 327 aaPredicted RBP7.21□□□□□ -1.26
SMARCC1-208ENST00000492896 ECSCRQ19T08 205 aa7.21□□□□□ -1.26
SMARCC1-208ENST00000492896 KLF17Q5JT82 389 aaPredicted RBP7.21□□□□□ -1.26
SMARCC1-208ENST00000492896 TMEM88Q6PEY1 159 aa7.21□□□□□ -1.26
SMARCC1-208ENST00000492896 UNQ5815/PRO19632Q6UWF5 114 aa7.21□□□□□ -1.26
SMARCC1-208ENST00000492896 TMEM219Q86XT9 240 aa7.21□□□□□ -1.26
SMARCC1-208ENST00000492896 RPUSD4Q96CM3 377 aaKnown RBP7.21□□□□□ -1.26
SMARCC1-208ENST00000492896 ZNF48Q96MX3 618 aaPredicted RBP7.21□□□□□ -1.26
SMARCC1-208ENST00000492896 FANCD2OSQ96PS1 177 aa7.21□□□□□ -1.26
SMARCC1-208ENST00000492896 SSX3Q99909 188 aa7.21□□□□□ -1.26
SMARCC1-208ENST00000492896 SMIM7Q9BQ49 75 aa7.21□□□□□ -1.26
SMARCC1-208ENST00000492896 SMCO4Q9NRQ5 59 aa7.21□□□□□ -1.26
SMARCC1-208ENST00000492896 ZNF355PQ9NSJ1 428 aa7.21□□□□□ -1.26
SMARCC1-208ENST00000492896 DOPEY2Q9Y3R5 2298 aa7.21□□□□□ -1.26
SMARCC1-208ENST00000492896 PRRC2AP48634 2157 aaKnown RBP7.2□□□□□ -1.26
SMARCC1-208ENST00000492896 LRRK2Q5S007 2527 aa7.2□□□□□ -1.26
SMARCC1-208ENST00000492896 TRAV30A0A087WSZ9 112 aa7.2□□□□□ -1.26
SMARCC1-208ENST00000492896 A6NDX4 124 aa7.2□□□□□ -1.26
SMARCC1-208ENST00000492896 H3BUX3 64 aa7.2□□□□□ -1.26
SMARCC1-208ENST00000492896 HYPMO75409 117 aa7.2□□□□□ -1.26
SMARCC1-208ENST00000492896 SCGB2A1O75556 95 aa7.2□□□□□ -1.26
SMARCC1-208ENST00000492896 AVPP01185 164 aa7.2□□□□□ -1.26
SMARCC1-208ENST00000492896 IGHV4-31P0DP07 118 aa7.2□□□□□ -1.26
SMARCC1-208ENST00000492896 AKR1C3P42330 323 aa7.2□□□□□ -1.26
SMARCC1-208ENST00000492896 MFAP4P55083 255 aa7.2□□□□□ -1.26
SMARCC1-208ENST00000492896 PLP1P60201 277 aa7.2□□□□□ -1.26
SMARCC1-208ENST00000492896 UBE2L3P68036 154 aaKnown RBP7.2□□□□□ -1.26
SMARCC1-208ENST00000492896 KIAA0141Q14154 515 aaPredicted RBP7.2□□□□□ -1.26
SMARCC1-208ENST00000492896 ZNF674Q2M3X9 581 aa7.2□□□□□ -1.26
SMARCC1-208ENST00000492896 TIGITQ495A1 244 aa7.2□□□□□ -1.26
SMARCC1-208ENST00000492896 PRSS57Q6UWY2 283 aa7.2□□□□□ -1.26
SMARCC1-208ENST00000492896 PATE2Q6UY27 113 aa7.2□□□□□ -1.26
SMARCC1-208ENST00000492896 OR5T1Q8NG75 326 aa7.2□□□□□ -1.26
SMARCC1-208ENST00000492896 OR5AU1Q8NGC0 362 aa7.2□□□□□ -1.26
SMARCC1-208ENST00000492896 OR1B1Q8NGR6 318 aa7.2□□□□□ -1.26
SMARCC1-208ENST00000492896 PIFOQ8TCI5 191 aa7.2□□□□□ -1.26
SMARCC1-208ENST00000492896 FAM167A-AS1Q96KT0 104 aa7.2□□□□□ -1.26
SMARCC1-208ENST00000492896 TMEM68Q96MH6 324 aa7.2□□□□□ -1.26
SMARCC1-208ENST00000492896 SLC25A2Q9BXI2 301 aa7.2□□□□□ -1.26
SMARCC1-208ENST00000492896 PARLQ9H300 379 aa7.2□□□□□ -1.26
SMARCC1-208ENST00000492896 GSX1Q9H4S2 264 aaPredicted RBP7.2□□□□□ -1.26
SMARCC1-208ENST00000492896 NAT8Q9UHE5 227 aa7.2□□□□□ -1.26
SMARCC1-208ENST00000492896 YTHDF2Q9Y5A9 579 aaKnown RBP7.2□□□□□ -1.26
SMARCC1-208ENST00000492896 SH2D7A6NKC9 451 aaPredicted RBP7.19□□□□□ -1.26
SMARCC1-208ENST00000492896 B4DEV8 164 aa7.19□□□□□ -1.26
SMARCC1-208ENST00000492896 TSPAN4O14817 238 aa7.19□□□□□ -1.26
SMARCC1-208ENST00000492896 GNG7O60262 68 aa7.19□□□□□ -1.26
SMARCC1-208ENST00000492896 OR2J3O76001 311 aa7.19□□□□□ -1.26
SMARCC1-208ENST00000492896 TOMM40O96008 361 aa7.19□□□□□ -1.26
SMARCC1-208ENST00000492896 TGFAP01135 160 aa7.19□□□□□ -1.26
SMARCC1-208ENST00000492896 PSG1P11464 419 aa7.19□□□□□ -1.26
SMARCC1-208ENST00000492896 ORM2P19652 201 aa7.19□□□□□ -1.26
SMARCC1-208ENST00000492896 LYZP61626 148 aa7.19□□□□□ -1.26
SMARCC1-208ENST00000492896 LY6EQ16553 131 aa7.19□□□□□ -1.26
SMARCC1-208ENST00000492896 Q56UQ5 140 aa7.19□□□□□ -1.26
SMARCC1-208ENST00000492896 MORN5Q5VZ52 161 aa7.19□□□□□ -1.26
SMARCC1-208ENST00000492896 C16orf82Q7Z2V1 217 aa7.19□□□□□ -1.26
SMARCC1-208ENST00000492896 LINC00305Q7Z4B0 112 aa7.19□□□□□ -1.26
SMARCC1-208ENST00000492896 MAPK1IP1LQ8NDC0 245 aa7.19□□□□□ -1.26
SMARCC1-208ENST00000492896 ZNF503Q96F45 646 aa7.19□□□□□ -1.26
SMARCC1-208ENST00000492896 Q96MF0 132 aa7.19□□□□□ -1.26
SMARCC1-208ENST00000492896 UHRF2Q96PU4 802 aa7.19□□□□□ -1.26
SMARCC1-208ENST00000492896 PSMG3-AS1Q96PY0 264 aa7.19□□□□□ -1.26
SMARCC1-208ENST00000492896 PAXXQ9BUH6 204 aa7.19□□□□□ -1.26
SMARCC1-208ENST00000492896 TMUB1Q9BVT8 246 aa7.19□□□□□ -1.26
SMARCC1-208ENST00000492896 SDF2L1Q9HCN8 221 aa7.19□□□□□ -1.26
SMARCC1-208ENST00000492896 C21orf62Q9NYP8 219 aa7.19□□□□□ -1.26
SMARCC1-208ENST00000492896 PITPNC1Q9UKF7 332 aa7.19□□□□□ -1.26
SMARCC1-208ENST00000492896 HIGD1AQ9Y241 93 aa7.19□□□□□ -1.26
SMARCC1-208ENST00000492896 ABCA1O95477 2261 aa7.18□□□□□ -1.26
SMARCC1-208ENST00000492896 A0A087WWC5 75 aa7.18□□□□□ -1.26
SMARCC1-208ENST00000492896 TRAV5A0A0B4J249 113 aa7.18□□□□□ -1.26
SMARCC1-208ENST00000492896 SCO2A0A1W2PP80 73 aa7.18□□□□□ -1.26
SMARCC1-208ENST00000492896 M0QZK8 103 aa7.18□□□□□ -1.26
SMARCC1-208ENST00000492896 NDUFB8O95169 186 aa7.18□□□□□ -1.26
SMARCC1-208ENST00000492896 IGKV1-17P01599 117 aa7.18□□□□□ -1.26
SMARCC1-208ENST00000492896 OR10J4P0C629 311 aa7.18□□□□□ -1.26
SMARCC1-208ENST00000492896 RD3LP0DJH9 198 aa7.18□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms