RNA–Protein interactions for RNA: ENST00000492606.1

UBR4-215, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 3

Gene UBR4, Length 314 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-215ENST00000492606 OR4C5Q8NGB2 326 aa2.16□□□□□ -2.06
UBR4-215ENST00000492606 OR51T1Q8NGJ9 327 aa2.16□□□□□ -2.06
UBR4-215ENST00000492606 MAL2Q969L2 176 aa2.16□□□□□ -2.06
UBR4-215ENST00000492606 PHB2Q99623 299 aa2.16□□□□□ -2.06
UBR4-215ENST00000492606 ATP5SQ99766 215 aa2.16□□□□□ -2.06
UBR4-215ENST00000492606 SULT4A1Q9BR01 284 aa2.16□□□□□ -2.06
UBR4-215ENST00000492606 NMNAT1Q9HAN9 279 aaPredicted RBP2.16□□□□□ -2.06
UBR4-215ENST00000492606 CACYBPQ9HB71 228 aaKnown RBP2.16□□□□□ -2.06
UBR4-215ENST00000492606 PLAC8Q9NZF1 115 aa2.16□□□□□ -2.06
UBR4-215ENST00000492606 IFNKQ9P0W0 207 aa2.16□□□□□ -2.06
UBR4-215ENST00000492606 RABAC1Q9UI14 185 aa2.16□□□□□ -2.06
UBR4-215ENST00000492606 F11RQ9Y624 299 aaKnown RBP2.16□□□□□ -2.06
UBR4-215ENST00000492606 IGLV1-50A0A075B6I6 118 aa2.15□□□□□ -2.07
UBR4-215ENST00000492606 TRAV2A0A0B4J234 112 aa2.15□□□□□ -2.07
UBR4-215ENST00000492606 FAM159BA6NKW6 160 aa2.15□□□□□ -2.07
UBR4-215ENST00000492606 MIF4GDA9UHW6 222 aaKnown RBP2.15□□□□□ -2.07
UBR4-215ENST00000492606 RAB29O14966 203 aa2.15□□□□□ -2.07
UBR4-215ENST00000492606 FGGP02679 453 aa2.15□□□□□ -2.07
UBR4-215ENST00000492606 CT45A6P0DMU7 189 aa2.15□□□□□ -2.07
UBR4-215ENST00000492606 CT45A5P0DMU8 189 aa2.15□□□□□ -2.07
UBR4-215ENST00000492606 CT45A7P0DMV0 189 aa2.15□□□□□ -2.07
UBR4-215ENST00000492606 PRKACAP17612 351 aa2.15□□□□□ -2.07
UBR4-215ENST00000492606 SRMP19623 302 aa2.15□□□□□ -2.07
UBR4-215ENST00000492606 PPP1CCP36873 323 aaKnown RBP2.15□□□□□ -2.07
UBR4-215ENST00000492606 RORCP51449 518 aa2.15□□□□□ -2.07
UBR4-215ENST00000492606 DSTNP60981 165 aa2.15□□□□□ -2.07
UBR4-215ENST00000492606 OGFRL1Q5TC84 451 aaPredicted RBP2.15□□□□□ -2.07
UBR4-215ENST00000492606 NXNL2Q5VZ03 156 aa2.15□□□□□ -2.07
UBR4-215ENST00000492606 PLET1Q6UQ28 207 aa2.15□□□□□ -2.07
UBR4-215ENST00000492606 ZNF833PQ6ZTB9 187 aa2.15□□□□□ -2.07
UBR4-215ENST00000492606 ENTHD1Q8IYW4 607 aa2.15□□□□□ -2.07
UBR4-215ENST00000492606 FAM58AQ8N1B3 248 aa2.15□□□□□ -2.07
UBR4-215ENST00000492606 TMEM256Q8N2U0 113 aa2.15□□□□□ -2.07
UBR4-215ENST00000492606 TTC9CQ8N5M4 171 aa2.15□□□□□ -2.07
UBR4-215ENST00000492606 ZNF709Q8N972 641 aa2.15□□□□□ -2.07
UBR4-215ENST00000492606 C9orf163Q8N9P6 203 aa2.15□□□□□ -2.07
UBR4-215ENST00000492606 OR8J2Q8NGG1 315 aa2.15□□□□□ -2.07
UBR4-215ENST00000492606 AGR3Q8TD06 166 aa2.15□□□□□ -2.07
UBR4-215ENST00000492606 EEF1AKMT3Q96AZ1 226 aa2.15□□□□□ -2.07
UBR4-215ENST00000492606 SLAMF6Q96DU3 332 aa2.15□□□□□ -2.07
UBR4-215ENST00000492606 DPH3Q96FX2 82 aa2.15□□□□□ -2.07
UBR4-215ENST00000492606 C7orf50Q9BRJ6 194 aaKnown RBP2.15□□□□□ -2.07
UBR4-215ENST00000492606 POLR2J2Q9GZM3 115 aaKnown RBP2.15□□□□□ -2.07
UBR4-215ENST00000492606 NSRP1Q9H0G5 558 aaKnown RBP2.15□□□□□ -2.07
UBR4-215ENST00000492606 POLR2J3Q9H1A7 115 aaKnown RBP2.15□□□□□ -2.07
UBR4-215ENST00000492606 RGCCQ9H4X1 137 aa2.15□□□□□ -2.07
UBR4-215ENST00000492606 SLC25A22Q9H936 323 aa2.15□□□□□ -2.07
UBR4-215ENST00000492606 EXOSC4Q9NPD3 245 aaKnown RBP2.15□□□□□ -2.07
UBR4-215ENST00000492606 KCNIP1Q9NZI2 227 aa2.15□□□□□ -2.07
UBR4-215ENST00000492606 GOLT1BQ9Y3E0 138 aa2.15□□□□□ -2.07
UBR4-215ENST00000492606 SAMHD1Q9Y3Z3 626 aaKnown RBP2.15□□□□□ -2.07
UBR4-215ENST00000492606 A0A1W2PQL4 384 aaPredicted RBP2.14□□□□□ -2.07
UBR4-215ENST00000492606 TVP23AA6NH52 213 aa2.14□□□□□ -2.07
UBR4-215ENST00000492606 J3QRK9 145 aa2.14□□□□□ -2.07
UBR4-215ENST00000492606 NRASP01111 189 aa2.14□□□□□ -2.07
UBR4-215ENST00000492606 CD14P08571 375 aa2.14□□□□□ -2.07
UBR4-215ENST00000492606 ANXA8P13928 327 aa2.14□□□□□ -2.07
UBR4-215ENST00000492606 RCC1P18754 421 aaPredicted RBP2.14□□□□□ -2.07
UBR4-215ENST00000492606 PPIBP23284 216 aaKnown RBP2.14□□□□□ -2.07
UBR4-215ENST00000492606 DEFB1P60022 68 aa2.14□□□□□ -2.07
UBR4-215ENST00000492606 LYZP61626 148 aa2.14□□□□□ -2.07
UBR4-215ENST00000492606 PPP1R7Q15435 360 aa2.14□□□□□ -2.07
UBR4-215ENST00000492606 SPANXN2Q5MJ10 180 aa2.14□□□□□ -2.07
UBR4-215ENST00000492606 ZNF684Q5T5D7 378 aa2.14□□□□□ -2.07
UBR4-215ENST00000492606 ANXA8L1Q5VT79 327 aa2.14□□□□□ -2.07
UBR4-215ENST00000492606 RSBN1Q5VWQ0 802 aaPredicted RBP2.14□□□□□ -2.07
UBR4-215ENST00000492606 DPPA3Q6W0C5 159 aa2.14□□□□□ -2.07
UBR4-215ENST00000492606 COX6B2Q6YFQ2 88 aa2.14□□□□□ -2.07
UBR4-215ENST00000492606 SLC25A26Q70HW3 274 aa2.14□□□□□ -2.07
UBR4-215ENST00000492606 SPAG16Q8N0X2 631 aa2.14□□□□□ -2.07
UBR4-215ENST00000492606 OR2G2Q8NGZ5 317 aa2.14□□□□□ -2.07
UBR4-215ENST00000492606 ZNF502Q8TBZ5 544 aa2.14□□□□□ -2.07
UBR4-215ENST00000492606 IFT81Q8WYA0 676 aa2.14□□□□□ -2.07
UBR4-215ENST00000492606 ARL11Q969Q4 196 aa2.14□□□□□ -2.07
UBR4-215ENST00000492606 SLC29A1Q99808 456 aa2.14□□□□□ -2.07
UBR4-215ENST00000492606 MRPL57Q9BQC6 102 aaKnown RBP2.14□□□□□ -2.07
UBR4-215ENST00000492606 SLC35B3Q9H1N7 401 aa2.14□□□□□ -2.07
UBR4-215ENST00000492606 NCOR1P1Q9H4R4 102 aa2.14□□□□□ -2.07
UBR4-215ENST00000492606 NUFIP1Q9UHK0 495 aaKnown RBP2.14□□□□□ -2.07
UBR4-215ENST00000492606 TP53TG3Q9ULZ0 132 aa2.14□□□□□ -2.07
UBR4-215ENST00000492606 ATP6V1DQ9Y5K8 247 aa2.14□□□□□ -2.07
UBR4-215ENST00000492606 V9GYQ6 96 aa2.14□□□□□ -2.07
UBR4-215ENST00000492606 IGHV3-66A0A0C4DH42 116 aa2.13□□□□□ -2.07
UBR4-215ENST00000492606 TEX46H3BTG2 121 aa2.13□□□□□ -2.07
UBR4-215ENST00000492606 H7C2Y5 167 aa2.13□□□□□ -2.07
UBR4-215ENST00000492606 NDUFA4O00483 81 aa2.13□□□□□ -2.07
UBR4-215ENST00000492606 NUPL2O15504 423 aaKnown RBP2.13□□□□□ -2.07
UBR4-215ENST00000492606 EIF3GO75821 320 aaKnown RBP eCLIP2.13□□□□□ -2.07
UBR4-215ENST00000492606 SULT1C4O75897 302 aa2.13□□□□□ -2.07
UBR4-215ENST00000492606 IGKV1-16P04430 117 aa2.13□□□□□ -2.07
UBR4-215ENST00000492606 GYPBP06028 91 aa2.13□□□□□ -2.07
UBR4-215ENST00000492606 PLTPP55058 493 aa2.13□□□□□ -2.07
UBR4-215ENST00000492606 CLDN8P56748 225 aa2.13□□□□□ -2.07
UBR4-215ENST00000492606 KRTAP10-10P60014 251 aa2.13□□□□□ -2.07
UBR4-215ENST00000492606 PAX5Q02548 391 aa2.13□□□□□ -2.07
UBR4-215ENST00000492606 CKAP4Q07065 602 aaKnown RBP2.13□□□□□ -2.07
UBR4-215ENST00000492606 PRSS8Q16651 343 aa2.13□□□□□ -2.07
UBR4-215ENST00000492606 KRTAP13-3Q3SY46 172 aa2.13□□□□□ -2.07
UBR4-215ENST00000492606 Q3ZCU0 254 aa2.13□□□□□ -2.07
UBR4-215ENST00000492606 PAGE3Q5JUK9 113 aa2.13□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms