RNA–Protein interactions for RNA: ENST00000492455.1

HMGB1P30-201, Transcript of high mobility group box 1 pseudogene 30, humanhuman

BASIC

Gene HMGB1P30, Length 606 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P30-201ENST00000492455 DEFA3P59666 94 aa0.85□□□□□ -2.27
HMGB1P30-201ENST00000492455 CTAG1AP78358 180 aa0.85□□□□□ -2.27
HMGB1P30-201ENST00000492455 RIC1Q4ADV7 1423 aa0.85□□□□□ -2.27
HMGB1P30-201ENST00000492455 S100A7AQ86SG5 101 aa0.85□□□□□ -2.27
HMGB1P30-201ENST00000492455 OR13D1Q8NGV5 346 aa0.85□□□□□ -2.27
HMGB1P30-201ENST00000492455 OR10X1Q8NGY0 326 aa0.85□□□□□ -2.27
HMGB1P30-201ENST00000492455 WFDC5Q8TCV5 224 aa0.85□□□□□ -2.27
HMGB1P30-201ENST00000492455 GNPDA2Q8TDQ7 276 aa0.85□□□□□ -2.27
HMGB1P30-201ENST00000492455 ADAT3Q96EY9 351 aaPredicted RBP0.85□□□□□ -2.27
HMGB1P30-201ENST00000492455 SERPINI1Q99574 410 aa0.85□□□□□ -2.27
HMGB1P30-201ENST00000492455 RETNLBQ9BQ08 111 aa0.85□□□□□ -2.27
HMGB1P30-201ENST00000492455 SLC50A1Q9BRV3 221 aa0.85□□□□□ -2.27
HMGB1P30-201ENST00000492455 TMEM133Q9H2Q1 129 aa0.85□□□□□ -2.27
HMGB1P30-201ENST00000492455 EPDR1Q9UM22 224 aa0.85□□□□□ -2.27
HMGB1P30-201ENST00000492455 FAM32AQ9Y421 112 aaKnown RBP0.85□□□□□ -2.27
HMGB1P30-201ENST00000492455 COL6A6A6NMZ7 2263 aa0.85□□□□□ -2.27
HMGB1P30-201ENST00000492455 RTL1A6NKG5 1358 aa0.84□□□□□ -2.27
HMGB1P30-201ENST00000492455 A0A087X0T9 212 aa0.84□□□□□ -2.27
HMGB1P30-201ENST00000492455 TRAV14DV4A0A0A6YYC5 116 aa0.84□□□□□ -2.27
HMGB1P30-201ENST00000492455 CLDN25C9JDP6 229 aa0.84□□□□□ -2.27
HMGB1P30-201ENST00000492455 J3QRK9 145 aa0.84□□□□□ -2.27
HMGB1P30-201ENST00000492455 ANGP03950 147 aaKnown RBP0.84□□□□□ -2.27
HMGB1P30-201ENST00000492455 BAALC-AS2P0C853 105 aa0.84□□□□□ -2.27
HMGB1P30-201ENST00000492455 ERP29P30040 261 aaKnown RBP0.84□□□□□ -2.27
HMGB1P30-201ENST00000492455 TMED2Q15363 201 aa0.84□□□□□ -2.27
HMGB1P30-201ENST00000492455 SURF2Q15527 256 aaPredicted RBP0.84□□□□□ -2.27
HMGB1P30-201ENST00000492455 SPANXN5Q5MJ07 72 aa0.84□□□□□ -2.27
HMGB1P30-201ENST00000492455 PHF13Q86YI8 300 aaPredicted RBP0.84□□□□□ -2.27
HMGB1P30-201ENST00000492455 OR8D4Q8NGM9 314 aa0.84□□□□□ -2.27
HMGB1P30-201ENST00000492455 C10orf105Q8TEF2 133 aa0.84□□□□□ -2.27
HMGB1P30-201ENST00000492455 AQP3Q92482 292 aa0.84□□□□□ -2.27
HMGB1P30-201ENST00000492455 GPR146Q96CH1 333 aa0.84□□□□□ -2.27
HMGB1P30-201ENST00000492455 C9orf16Q9BUW7 83 aa0.84□□□□□ -2.27
HMGB1P30-201ENST00000492455 REG4Q9BYZ8 158 aa0.84□□□□□ -2.27
HMGB1P30-201ENST00000492455 PSTPIP2Q9H939 334 aa0.84□□□□□ -2.27
HMGB1P30-201ENST00000492455 ENY2Q9NPA8 101 aa0.84□□□□□ -2.27
HMGB1P30-201ENST00000492455 TAS2R4Q9NYW5 299 aa0.84□□□□□ -2.27
HMGB1P30-201ENST00000492455 OR5AC2Q9NZP5 309 aa0.84□□□□□ -2.27
HMGB1P30-201ENST00000492455 TECTAO75443 2155 aa0.84□□□□□ -2.28
HMGB1P30-201ENST00000492455 CCDC88AQ3V6T2 1871 aa0.84□□□□□ -2.28
HMGB1P30-201ENST00000492455 MYOFQ9NZM1 2061 aa0.84□□□□□ -2.28
HMGB1P30-201ENST00000492455 TRAV1-1A0A0B4J248 108 aa0.83□□□□□ -2.28
HMGB1P30-201ENST00000492455 TRAV4A0A0B4J268 109 aa0.83□□□□□ -2.28
HMGB1P30-201ENST00000492455 IGKV1-9A0A0C4DH69 117 aa0.83□□□□□ -2.28
HMGB1P30-201ENST00000492455 C2orf70A6NJV1 201 aa0.83□□□□□ -2.28
HMGB1P30-201ENST00000492455 C1orf196B1AJZ1 125 aa0.83□□□□□ -2.28
HMGB1P30-201ENST00000492455 UBL3O95164 117 aa0.83□□□□□ -2.28
HMGB1P30-201ENST00000492455 SERPINB9P50453 376 aa0.83□□□□□ -2.28
HMGB1P30-201ENST00000492455 KRTAP10-4P60372 401 aaPredicted RBP0.83□□□□□ -2.28
HMGB1P30-201ENST00000492455 ARF6P62330 175 aa0.83□□□□□ -2.28
HMGB1P30-201ENST00000492455 PDE6HQ13956 83 aa0.83□□□□□ -2.28
HMGB1P30-201ENST00000492455 TAF1AQ15573 450 aaPredicted RBP0.83□□□□□ -2.28
HMGB1P30-201ENST00000492455 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP0.83□□□□□ -2.28
HMGB1P30-201ENST00000492455 GOLT1AQ6ZVE7 132 aa0.83□□□□□ -2.28
HMGB1P30-201ENST00000492455 LINC00311Q8N616 119 aa0.83□□□□□ -2.28
HMGB1P30-201ENST00000492455 C12orf29Q8N999 325 aa0.83□□□□□ -2.28
HMGB1P30-201ENST00000492455 HIST1H2BLQ99880 126 aa0.83□□□□□ -2.28
HMGB1P30-201ENST00000492455 TRABDQ9H4I3 376 aa0.83□□□□□ -2.28
HMGB1P30-201ENST00000492455 ARMC1Q9NVT9 282 aa0.83□□□□□ -2.28
HMGB1P30-201ENST00000492455 NHP2Q9NX24 153 aaKnown RBP0.83□□□□□ -2.28
HMGB1P30-201ENST00000492455 OPTCQ9UBM4 332 aa0.83□□□□□ -2.28
HMGB1P30-201ENST00000492455 SOX21Q9Y651 276 aaPredicted RBP0.83□□□□□ -2.28
HMGB1P30-201ENST00000492455 ARL5AQ9Y689 179 aa0.83□□□□□ -2.28
HMGB1P30-201ENST00000492455 ZNF106Q9H2Y7 1883 aaKnown RBP0.82□□□□□ -2.28
HMGB1P30-201ENST00000492455 FLG2Q5D862 2391 aaPredicted RBP0.82□□□□□ -2.28
HMGB1P30-201ENST00000492455 IGKV3-7A0A075B6H7 116 aa0.82□□□□□ -2.28
HMGB1P30-201ENST00000492455 TRBV19A0A075B6N1 114 aa0.82□□□□□ -2.28
HMGB1P30-201ENST00000492455 IGKV2-40A0A087WW87 121 aaPredicted RBP0.82□□□□□ -2.28
HMGB1P30-201ENST00000492455 C7orf71A4D174 169 aa0.82□□□□□ -2.28
HMGB1P30-201ENST00000492455 CYB5BO43169 146 aa0.82□□□□□ -2.28
HMGB1P30-201ENST00000492455 OR1I1O60431 355 aa0.82□□□□□ -2.28
HMGB1P30-201ENST00000492455 IGKV2D-40P01614 121 aaPredicted RBP0.82□□□□□ -2.28
HMGB1P30-201ENST00000492455 C1QBP02746 253 aa0.82□□□□□ -2.28
HMGB1P30-201ENST00000492455 RNASE4P34096 147 aaKnown RBP0.82□□□□□ -2.28
HMGB1P30-201ENST00000492455 SSR2P43308 183 aa0.82□□□□□ -2.28
HMGB1P30-201ENST00000492455 ATP5G3P48201 142 aa0.82□□□□□ -2.28
HMGB1P30-201ENST00000492455 PIGPP57054 158 aa0.82□□□□□ -2.28
HMGB1P30-201ENST00000492455 HSPE1P61604 102 aaKnown RBP0.82□□□□□ -2.28
HMGB1P30-201ENST00000492455 TSNQ15631 228 aaKnown RBP0.82□□□□□ -2.28
HMGB1P30-201ENST00000492455 RNASE10Q5GAN6 216 aaKnown RBP0.82□□□□□ -2.28
HMGB1P30-201ENST00000492455 LYRM7Q5U5X0 104 aa0.82□□□□□ -2.28
HMGB1P30-201ENST00000492455 FAM172AQ8WUF8 416 aa0.82□□□□□ -2.28
HMGB1P30-201ENST00000492455 PHB2Q99623 299 aa0.82□□□□□ -2.28
HMGB1P30-201ENST00000492455 UTP11Q9Y3A2 253 aaKnown RBP0.82□□□□□ -2.28
HMGB1P30-201ENST00000492455 SCN10AQ9Y5Y9 1956 aa0.82□□□□□ -2.28
HMGB1P30-201ENST00000492455 PCF11O94913 1555 aaKnown RBP0.82□□□□□ -2.28
HMGB1P30-201ENST00000492455 POLEQ07864 2286 aa0.81□□□□□ -2.28
HMGB1P30-201ENST00000492455 STRCQ7RTU9 1775 aa0.81□□□□□ -2.28
HMGB1P30-201ENST00000492455 HCRTO43612 131 aa0.81□□□□□ -2.28
HMGB1P30-201ENST00000492455 LYZL6O75951 148 aa0.81□□□□□ -2.28
HMGB1P30-201ENST00000492455 ARL14EPLP0DKL9 152 aa0.81□□□□□ -2.28
HMGB1P30-201ENST00000492455 MGST1P10620 155 aaKnown RBP0.81□□□□□ -2.28
HMGB1P30-201ENST00000492455 BRS3P32247 399 aa0.81□□□□□ -2.28
HMGB1P30-201ENST00000492455 RHOBP62745 196 aa0.81□□□□□ -2.28
HMGB1P30-201ENST00000492455 EIF5AP63241 154 aaKnown RBP0.81□□□□□ -2.28
HMGB1P30-201ENST00000492455 BASP1P80723 227 aaKnown RBP0.81□□□□□ -2.28
HMGB1P30-201ENST00000492455 RHOGP84095 191 aa0.81□□□□□ -2.28
HMGB1P30-201ENST00000492455 RRN3P1Q2M238 152 aa0.81□□□□□ -2.28
HMGB1P30-201ENST00000492455 BRMS1LQ5PSV4 323 aa0.81□□□□□ -2.28
HMGB1P30-201ENST00000492455 HACD4Q5VWC8 232 aa0.81□□□□□ -2.28
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms