RNA–Protein interactions for RNA: ENST00000491857.1

PSMD4-212, Transcript of proteasome 26S subunit, non-ATPase 4, humanhuman

TSL 2

Gene PSMD4, Length 461 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD4-212ENST00000491857 NRN1Q9NPD7 142 aa12.11□□□□□ -0.47
PSMD4-212ENST00000491857 SMIM31A0A1B0GVY4 71 aa12.1□□□□□ -0.47
PSMD4-212ENST00000491857 EMP1P54849 157 aa12.1□□□□□ -0.47
PSMD4-212ENST00000491857 NEDD8Q15843 81 aa12.1□□□□□ -0.47
PSMD4-212ENST00000491857 MLANAQ16655 118 aa12.1□□□□□ -0.47
PSMD4-212ENST00000491857 BSXQ3C1V8 233 aa12.1□□□□□ -0.47
PSMD4-212ENST00000491857 RNF212Q495C1 297 aa12.1□□□□□ -0.47
PSMD4-212ENST00000491857 ZNF705AQ6ZN79 300 aaPredicted RBP12.1□□□□□ -0.47
PSMD4-212ENST00000491857 RRNAD1Q96FB5 475 aaKnown RBP12.1□□□□□ -0.47
PSMD4-212ENST00000491857 ZNF705FA8MVS1 300 aaPredicted RBP12.09□□□□□ -0.47
PSMD4-212ENST00000491857 GSTZ1O43708 216 aaPredicted RBP12.09□□□□□ -0.47
PSMD4-212ENST00000491857 IGLC1P0CG04 106 aa12.09□□□□□ -0.47
PSMD4-212ENST00000491857 ZNF705DP0CH99 300 aaPredicted RBP12.09□□□□□ -0.47
PSMD4-212ENST00000491857 ZNF705BP0CI00 300 aaPredicted RBP12.09□□□□□ -0.47
PSMD4-212ENST00000491857 HLA-DRB4P13762 266 aa12.09□□□□□ -0.47
PSMD4-212ENST00000491857 HTR2BP41595 481 aa12.09□□□□□ -0.47
PSMD4-212ENST00000491857 PIGPP57054 158 aa12.09□□□□□ -0.47
PSMD4-212ENST00000491857 YPEL3P61236 119 aaPredicted RBP12.09□□□□□ -0.47
PSMD4-212ENST00000491857 TRIM16LQ309B1 348 aa12.09□□□□□ -0.47
PSMD4-212ENST00000491857 C1orf134Q5TEV5 83 aa12.09□□□□□ -0.47
PSMD4-212ENST00000491857 RNASE11Q8TAA1 199 aaKnown RBP12.09□□□□□ -0.47
PSMD4-212ENST00000491857 TP53RKQ96S44 253 aa12.09□□□□□ -0.47
PSMD4-212ENST00000491857 PLA2G2EQ9NZK7 142 aa12.09□□□□□ -0.47
PSMD4-212ENST00000491857 RFNGQ9Y644 331 aa12.09□□□□□ -0.47
PSMD4-212ENST00000491857 HLA-DRB4X5D2U9 266 aa12.09□□□□□ -0.47
PSMD4-212ENST00000491857 NACAE9PAV3 2078 aa12.09□□□□□ -0.47
PSMD4-212ENST00000491857 SLC25A4P12235 298 aa12.08□□□□□ -0.48
PSMD4-212ENST00000491857 OR10J1P30954 320 aa12.08□□□□□ -0.48
PSMD4-212ENST00000491857 RPS19P39019 145 aaKnown RBP12.08□□□□□ -0.48
PSMD4-212ENST00000491857 NKX2-1P43699 371 aaPredicted RBP12.08□□□□□ -0.48
PSMD4-212ENST00000491857 SIGLEC15Q6ZMC9 328 aa12.08□□□□□ -0.48
PSMD4-212ENST00000491857 NIPSNAP3BQ9BS92 247 aa12.08□□□□□ -0.48
PSMD4-212ENST00000491857 KRTAP4-5Q9BYR2 181 aa12.08□□□□□ -0.48
PSMD4-212ENST00000491857 C3orf85A0A1B0GTC6 90 aa12.07□□□□□ -0.48
PSMD4-212ENST00000491857 IL4P05112 153 aa12.07□□□□□ -0.48
PSMD4-212ENST00000491857 PI3P19957 117 aa12.07□□□□□ -0.48
PSMD4-212ENST00000491857 TGFBR1P36897 503 aa12.07□□□□□ -0.48
PSMD4-212ENST00000491857 RND2P52198 227 aa12.07□□□□□ -0.48
PSMD4-212ENST00000491857 DHODHQ02127 395 aa12.07□□□□□ -0.48
PSMD4-212ENST00000491857 PRSS54Q6PEW0 395 aa12.07□□□□□ -0.48
PSMD4-212ENST00000491857 SNX29P2Q8IUI4 249 aa12.07□□□□□ -0.48
PSMD4-212ENST00000491857 DKK2Q9UBU2 259 aa12.07□□□□□ -0.48
PSMD4-212ENST00000491857 HSPG2P98160 4391 aa12.06□□□□□ -0.48
PSMD4-212ENST00000491857 IGHV3OR16-12A0A075B7B8 117 aa12.06□□□□□ -0.48
PSMD4-212ENST00000491857 M0QYG6 137 aa12.06□□□□□ -0.48
PSMD4-212ENST00000491857 BUB3O43684 328 aa12.06□□□□□ -0.48
PSMD4-212ENST00000491857 SPCS3P61009 180 aa12.06□□□□□ -0.48
PSMD4-212ENST00000491857 USF2Q15853 346 aaPredicted RBP12.06□□□□□ -0.48
PSMD4-212ENST00000491857 CCDC71LQ8N9Z2 235 aa12.06□□□□□ -0.48
PSMD4-212ENST00000491857 OR52E5Q8NH55 327 aa12.06□□□□□ -0.48
PSMD4-212ENST00000491857 RNASEH2CQ8TDP1 164 aaKnown RBP12.06□□□□□ -0.48
PSMD4-212ENST00000491857 COPZ2Q9P299 210 aa12.06□□□□□ -0.48
PSMD4-212ENST00000491857 B3GALNT1O75752 331 aa12.05□□□□□ -0.48
PSMD4-212ENST00000491857 APOA1P02647 267 aa12.05□□□□□ -0.48
PSMD4-212ENST00000491857 NUP62P37198 522 aaPredicted RBP12.05□□□□□ -0.48
PSMD4-212ENST00000491857 OXA1LQ15070 435 aa12.05□□□□□ -0.48
PSMD4-212ENST00000491857 C2orf83Q53S99 150 aa12.05□□□□□ -0.48
PSMD4-212ENST00000491857 RNASE10Q5GAN6 216 aaKnown RBP12.05□□□□□ -0.48
PSMD4-212ENST00000491857 FAM222AQ5U5X8 452 aa12.05□□□□□ -0.48
PSMD4-212ENST00000491857 ETFRF1Q6IPR1 90 aa12.05□□□□□ -0.48
PSMD4-212ENST00000491857 FAM219AQ8IW50 185 aa12.05□□□□□ -0.48
PSMD4-212ENST00000491857 ARRDC1Q8N5I2 433 aa12.05□□□□□ -0.48
PSMD4-212ENST00000491857 HEYLQ9NQ87 328 aaPredicted RBP12.05□□□□□ -0.48
PSMD4-212ENST00000491857 A0A0G2JRQ6 117 aa12.04□□□□□ -0.48
PSMD4-212ENST00000491857 TOMM40O96008 361 aa12.04□□□□□ -0.48
PSMD4-212ENST00000491857 HTN3P15516 51 aa12.04□□□□□ -0.48
PSMD4-212ENST00000491857 UCP1P25874 307 aa12.04□□□□□ -0.48
PSMD4-212ENST00000491857 FAM3BP58499 235 aaPredicted RBP12.04□□□□□ -0.48
PSMD4-212ENST00000491857 AARDQ4LEZ3 155 aa12.04□□□□□ -0.48
PSMD4-212ENST00000491857 LHFPL1Q86WI0 220 aa12.04□□□□□ -0.48
PSMD4-212ENST00000491857 SLC24A4Q8NFF2 622 aa12.04□□□□□ -0.48
PSMD4-212ENST00000491857 CTNNBIP1Q9NSA3 81 aaPredicted RBP12.04□□□□□ -0.48
PSMD4-212ENST00000491857 COMMD3Q9UBI1 195 aa12.04□□□□□ -0.48
PSMD4-212ENST00000491857 PFDN2Q9UHV9 154 aa12.04□□□□□ -0.48
PSMD4-212ENST00000491857 CDK2AP2O75956 126 aa12.03□□□□□ -0.48
PSMD4-212ENST00000491857 IGKV3-20P01619 116 aa12.03□□□□□ -0.48
PSMD4-212ENST00000491857 RD3LP0DJH9 198 aa12.03□□□□□ -0.48
PSMD4-212ENST00000491857 ID1P41134 155 aa12.03□□□□□ -0.48
PSMD4-212ENST00000491857 FXYD7P58549 80 aa12.03□□□□□ -0.48
PSMD4-212ENST00000491857 SP6Q3SY56 376 aa12.03□□□□□ -0.48
PSMD4-212ENST00000491857 FOXI2Q6ZQN5 318 aa12.03□□□□□ -0.48
PSMD4-212ENST00000491857 ZFAND1Q8TCF1 268 aa12.03□□□□□ -0.48
PSMD4-212ENST00000491857 CLUHP3Q96NS8 147 aa12.03□□□□□ -0.48
PSMD4-212ENST00000491857 SAV1Q9H4B6 383 aaPredicted RBP12.03□□□□□ -0.48
PSMD4-212ENST00000491857 GOLT1BQ9Y3E0 138 aa12.03□□□□□ -0.48
PSMD4-212ENST00000491857 TMED3Q9Y3Q3 217 aa12.03□□□□□ -0.48
PSMD4-212ENST00000491857 C16orf90A8MZG2 172 aa12.02□□□□□ -0.49
PSMD4-212ENST00000491857 HBE1P02100 147 aa12.02□□□□□ -0.49
PSMD4-212ENST00000491857 TBPP20226 339 aa12.02□□□□□ -0.49
PSMD4-212ENST00000491857 LSM3P62310 102 aaKnown RBP12.02□□□□□ -0.49
PSMD4-212ENST00000491857 GDF5OSQ5U4N7 250 aa12.02□□□□□ -0.49
PSMD4-212ENST00000491857 SPATA31B1PQ5VZV4 182 aa12.02□□□□□ -0.49
PSMD4-212ENST00000491857 NOXA1Q86UR1 476 aa12.02□□□□□ -0.49
PSMD4-212ENST00000491857 C15orf53Q8NAA6 179 aa12.02□□□□□ -0.49
PSMD4-212ENST00000491857 NPIPB3Q92617 1050 aa12.02□□□□□ -0.49
PSMD4-212ENST00000491857 LINC00052Q96N35 136 aa12.02□□□□□ -0.49
PSMD4-212ENST00000491857 C7orf50Q9BRJ6 194 aaKnown RBP12.02□□□□□ -0.49
PSMD4-212ENST00000491857 CEBPZOSA8MTT3 80 aa12.01□□□□□ -0.49
PSMD4-212ENST00000491857 PSMB3P49720 205 aa12.01□□□□□ -0.49
PSMD4-212ENST00000491857 TMEM88Q6PEY1 159 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms