RNA–Protein interactions for RNA: ENST00000491106.1

SNRNP40-207, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 459 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-207ENST00000491106 Q6ZT83 130 aa1.64□□□□□ -2.15
SNRNP40-207ENST00000491106 FAM231DQ6ZW35 169 aa1.64□□□□□ -2.15
SNRNP40-207ENST00000491106 SSX8Q7RTT4 187 aa1.64□□□□□ -2.15
SNRNP40-207ENST00000491106 SSX7Q7RTT5 188 aa1.64□□□□□ -2.15
SNRNP40-207ENST00000491106 VASH2Q86V25 355 aa1.64□□□□□ -2.15
SNRNP40-207ENST00000491106 MDP1Q86V88 176 aa1.64□□□□□ -2.15
SNRNP40-207ENST00000491106 NIT1Q86X76 327 aa1.64□□□□□ -2.15
SNRNP40-207ENST00000491106 TMEM219Q86XT9 240 aa1.64□□□□□ -2.15
SNRNP40-207ENST00000491106 MMD2Q8IY49 270 aa1.64□□□□□ -2.15
SNRNP40-207ENST00000491106 C17orf78Q8N4C9 275 aa1.64□□□□□ -2.15
SNRNP40-207ENST00000491106 TMEM251Q8N6I4 163 aa1.64□□□□□ -2.15
SNRNP40-207ENST00000491106 Q8N7P7 452 aa1.64□□□□□ -2.15
SNRNP40-207ENST00000491106 TMEM178AQ8NBL3 297 aa1.64□□□□□ -2.15
SNRNP40-207ENST00000491106 NECAP1Q8NC96 275 aa1.64□□□□□ -2.15
SNRNP40-207ENST00000491106 ZNF738Q8NE65 137 aa1.64□□□□□ -2.15
SNRNP40-207ENST00000491106 OR5T1Q8NG75 326 aa1.64□□□□□ -2.15
SNRNP40-207ENST00000491106 OR2Z1Q8NG97 314 aa1.64□□□□□ -2.15
SNRNP40-207ENST00000491106 OR4B1Q8NGF8 309 aa1.64□□□□□ -2.15
SNRNP40-207ENST00000491106 OR4P4Q8NGL7 312 aa1.64□□□□□ -2.15
SNRNP40-207ENST00000491106 OR1L6Q8NGR2 347 aa1.64□□□□□ -2.15
SNRNP40-207ENST00000491106 OR1L4Q8NGR5 311 aa1.64□□□□□ -2.15
SNRNP40-207ENST00000491106 OR1L8Q8NGR8 309 aa1.64□□□□□ -2.15
SNRNP40-207ENST00000491106 RFESDQ8TAC1 157 aa1.64□□□□□ -2.15
SNRNP40-207ENST00000491106 CMTM2Q8TAZ6 248 aa1.64□□□□□ -2.15
SNRNP40-207ENST00000491106 VN1R17PQ8TDU5 208 aa1.64□□□□□ -2.15
SNRNP40-207ENST00000491106 CT55Q8WUE5 264 aa1.64□□□□□ -2.15
SNRNP40-207ENST00000491106 ORAOV1Q8WV07 137 aa1.64□□□□□ -2.15
SNRNP40-207ENST00000491106 C11orf52Q96A22 123 aa1.64□□□□□ -2.15
SNRNP40-207ENST00000491106 SMIM12Q96EX1 92 aa1.64□□□□□ -2.15
SNRNP40-207ENST00000491106 ZNF488Q96MN9 340 aa1.64□□□□□ -2.15
SNRNP40-207ENST00000491106 OR2V2Q96R30 315 aa1.64□□□□□ -2.15
SNRNP40-207ENST00000491106 NABP2Q9BQ15 211 aa1.64□□□□□ -2.15
SNRNP40-207ENST00000491106 HSPB9Q9BQS6 159 aa1.64□□□□□ -2.15
SNRNP40-207ENST00000491106 ATG101Q9BSB4 218 aa1.64□□□□□ -2.15
SNRNP40-207ENST00000491106 TMEM208Q9BTX3 173 aa1.64□□□□□ -2.15
SNRNP40-207ENST00000491106 VAMP8Q9BV40 100 aa1.64□□□□□ -2.15
SNRNP40-207ENST00000491106 SAMD10Q9BYL1 202 aa1.64□□□□□ -2.15
SNRNP40-207ENST00000491106 TTTY12Q9BZ98 90 aa1.64□□□□□ -2.15
SNRNP40-207ENST00000491106 COMMD5Q9GZQ3 224 aa1.64□□□□□ -2.15
SNRNP40-207ENST00000491106 DEFB127Q9H1M4 99 aa1.64□□□□□ -2.15
SNRNP40-207ENST00000491106 OR2D2Q9H210 308 aa1.64□□□□□ -2.15
SNRNP40-207ENST00000491106 PATZ1Q9HBE1 687 aaKnown RBP1.64□□□□□ -2.15
SNRNP40-207ENST00000491106 NRN1Q9NPD7 142 aa1.64□□□□□ -2.15
SNRNP40-207ENST00000491106 SLC35D1Q9NTN3 355 aa1.64□□□□□ -2.15
SNRNP40-207ENST00000491106 C1RLQ9NZP8 487 aa1.64□□□□□ -2.15
SNRNP40-207ENST00000491106 UQCR10Q9UDW1 63 aa1.64□□□□□ -2.15
SNRNP40-207ENST00000491106 NAT8BQ9UHF3 227 aa1.64□□□□□ -2.15
SNRNP40-207ENST00000491106 IL17BQ9UHF5 180 aa1.64□□□□□ -2.15
SNRNP40-207ENST00000491106 JPT1Q9UK76 154 aa1.64□□□□□ -2.15
SNRNP40-207ENST00000491106 PRNDQ9UKY0 176 aa1.64□□□□□ -2.15
SNRNP40-207ENST00000491106 FOXA2Q9Y261 457 aaPredicted RBP1.64□□□□□ -2.15
SNRNP40-207ENST00000491106 KLF12Q9Y4X4 402 aa1.64□□□□□ -2.15
SNRNP40-207ENST00000491106 PRR14LQ5THK1 2151 aa1.64□□□□□ -2.15
SNRNP40-207ENST00000491106 TRAV9-2A0A087WT02 112 aa1.63□□□□□ -2.15
SNRNP40-207ENST00000491106 TRAV38-1A0A0B4J264 116 aa1.63□□□□□ -2.15
SNRNP40-207ENST00000491106 KBTBD11-OT1A0A1B0GTJ5 212 aa1.63□□□□□ -2.15
SNRNP40-207ENST00000491106 UBE2L5PA0A1B0GUS4 154 aa1.63□□□□□ -2.15
SNRNP40-207ENST00000491106 PGPA6NDG6 321 aa1.63□□□□□ -2.15
SNRNP40-207ENST00000491106 NKX6-3A6NJ46 265 aa1.63□□□□□ -2.15
SNRNP40-207ENST00000491106 DEFB108AA8MXU0 73 aa1.63□□□□□ -2.15
SNRNP40-207ENST00000491106 SNURFLB1AK76 121 aa1.63□□□□□ -2.15
SNRNP40-207ENST00000491106 USP17L23D6RBM5 183 aa1.63□□□□□ -2.15
SNRNP40-207ENST00000491106 PRSS46E5RG02 174 aa1.63□□□□□ -2.15
SNRNP40-207ENST00000491106 K7EP13 123 aa1.63□□□□□ -2.15
SNRNP40-207ENST00000491106 M0R296 226 aa1.63□□□□□ -2.15
SNRNP40-207ENST00000491106 CRXO43186 299 aaPredicted RBP1.63□□□□□ -2.15
SNRNP40-207ENST00000491106 SMPD2O60906 423 aa1.63□□□□□ -2.15
SNRNP40-207ENST00000491106 SERF1AO75920 110 aa1.63□□□□□ -2.15
SNRNP40-207ENST00000491106 S1PR2O95136 353 aa1.63□□□□□ -2.15
SNRNP40-207ENST00000491106 IGLV1-44P01699 117 aa1.63□□□□□ -2.15
SNRNP40-207ENST00000491106 SP9P0CG40 484 aa1.63□□□□□ -2.15
SNRNP40-207ENST00000491106 ARL14EPLP0DKL9 152 aa1.63□□□□□ -2.15
SNRNP40-207ENST00000491106 IGLC2P0DOY2 106 aa1.63□□□□□ -2.15
SNRNP40-207ENST00000491106 IGLC3P0DOY3 106 aa1.63□□□□□ -2.15
SNRNP40-207ENST00000491106 IRF2P14316 349 aa1.63□□□□□ -2.15
SNRNP40-207ENST00000491106 IGHV1-2P23083 117 aa1.63□□□□□ -2.15
SNRNP40-207ENST00000491106 NPY1RP25929 384 aa1.63□□□□□ -2.15
SNRNP40-207ENST00000491106 CRYBB3P26998 211 aa1.63□□□□□ -2.15
SNRNP40-207ENST00000491106 CTRLP40313 264 aa1.63□□□□□ -2.15
SNRNP40-207ENST00000491106 ATP5G3P48201 142 aa1.63□□□□□ -2.15
SNRNP40-207ENST00000491106 ZNF83P51522 516 aa1.63□□□□□ -2.15
SNRNP40-207ENST00000491106 UBE2G2P60604 165 aa1.63□□□□□ -2.15
SNRNP40-207ENST00000491106 MEF2CQ06413 473 aaPredicted RBP1.63□□□□□ -2.15
SNRNP40-207ENST00000491106 UBE2V1Q13404 147 aa1.63□□□□□ -2.15
SNRNP40-207ENST00000491106 PSG5Q15238 335 aa1.63□□□□□ -2.15
SNRNP40-207ENST00000491106 MMDQ15546 238 aa1.63□□□□□ -2.15
SNRNP40-207ENST00000491106 SMIM21Q3B7S5 101 aa1.63□□□□□ -2.15
SNRNP40-207ENST00000491106 ALKBH6Q3KRA9 238 aa1.63□□□□□ -2.15
SNRNP40-207ENST00000491106 TDRG1Q3Y452 100 aa1.63□□□□□ -2.15
SNRNP40-207ENST00000491106 CT45A1Q5HYN5 189 aa1.63□□□□□ -2.15
SNRNP40-207ENST00000491106 TIMM23BQ5SRD1 257 aa1.63□□□□□ -2.15
SNRNP40-207ENST00000491106 IBA57Q5T440 356 aaKnown RBP1.63□□□□□ -2.15
SNRNP40-207ENST00000491106 TPTE2P1Q5T6R2 138 aa1.63□□□□□ -2.15
SNRNP40-207ENST00000491106 PRAMEF5Q5TYX0 476 aa1.63□□□□□ -2.15
SNRNP40-207ENST00000491106 PRAMEF6Q5VXH4 476 aa1.63□□□□□ -2.15
SNRNP40-207ENST00000491106 STUMQ69YW2 141 aa1.63□□□□□ -2.15
SNRNP40-207ENST00000491106 OR4A47Q6IF82 309 aa1.63□□□□□ -2.15
SNRNP40-207ENST00000491106 IGFL2Q6UWQ7 119 aa1.63□□□□□ -2.15
SNRNP40-207ENST00000491106 C12orf54Q6X4T0 127 aa1.63□□□□□ -2.15
SNRNP40-207ENST00000491106 TMEM136Q6ZRR5 245 aa1.63□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 121.8 ms