RNA–Protein interactions for RNA: ENST00000490557.1

HMGB1P38-201, Transcript of high mobility group box 1 pseudogene 38, humanhuman

BASIC

Gene HMGB1P38, Length 577 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P38-201ENST00000490557 A0A0B4J2C4 111 aa2.46□□□□□ -2.02
HMGB1P38-201ENST00000490557 IGKV2-24A0A0C4DH68 120 aa2.46□□□□□ -2.02
HMGB1P38-201ENST00000490557 BUB1B-PAK6H3BSN5 160 aa2.46□□□□□ -2.02
HMGB1P38-201ENST00000490557 TXNDC9O14530 226 aa2.46□□□□□ -2.02
HMGB1P38-201ENST00000490557 LECT2O14960 151 aa2.46□□□□□ -2.02
HMGB1P38-201ENST00000490557 CST7O76096 145 aa2.46□□□□□ -2.02
HMGB1P38-201ENST00000490557 LHBP01229 141 aa2.46□□□□□ -2.02
HMGB1P38-201ENST00000490557 PAEPP09466 180 aa2.46□□□□□ -2.02
HMGB1P38-201ENST00000490557 ZNF25P17030 456 aaPredicted RBP2.46□□□□□ -2.02
HMGB1P38-201ENST00000490557 CRHBPP24387 322 aa2.46□□□□□ -2.02
HMGB1P38-201ENST00000490557 SDC2P34741 201 aa2.46□□□□□ -2.02
HMGB1P38-201ENST00000490557 INSL3P51460 131 aa2.46□□□□□ -2.02
HMGB1P38-201ENST00000490557 UBE2BP63146 152 aa2.46□□□□□ -2.02
HMGB1P38-201ENST00000490557 EMX2Q04743 252 aa2.46□□□□□ -2.02
HMGB1P38-201ENST00000490557 ZNF322Q6U7Q0 402 aaPredicted RBP2.46□□□□□ -2.02
HMGB1P38-201ENST00000490557 C4orf22Q6V702 233 aa2.46□□□□□ -2.02
HMGB1P38-201ENST00000490557 ZNF705AQ6ZN79 300 aaPredicted RBP2.46□□□□□ -2.02
HMGB1P38-201ENST00000490557 C16orf47Q6ZP98 133 aaPredicted RBP2.46□□□□□ -2.02
HMGB1P38-201ENST00000490557 LYZL2Q7Z4W2 148 aa2.46□□□□□ -2.02
HMGB1P38-201ENST00000490557 LHFPL1Q86WI0 220 aa2.46□□□□□ -2.02
HMGB1P38-201ENST00000490557 BPIFA4PQ86YQ2 179 aa2.46□□□□□ -2.02
HMGB1P38-201ENST00000490557 SPANXA2-OT1Q8N9U9 137 aa2.46□□□□□ -2.02
HMGB1P38-201ENST00000490557 OR51A4Q8NGJ6 313 aa2.46□□□□□ -2.02
HMGB1P38-201ENST00000490557 OR8D4Q8NGM9 314 aa2.46□□□□□ -2.02
HMGB1P38-201ENST00000490557 PRADC1Q9BSG0 188 aa2.46□□□□□ -2.02
HMGB1P38-201ENST00000490557 OR5V1Q9UGF6 321 aa2.46□□□□□ -2.02
HMGB1P38-201ENST00000490557 U3KQK5 164 aa2.46□□□□□ -2.02
HMGB1P38-201ENST00000490557 LOXHD1Q8IVV2 1947 aa2.46□□□□□ -2.02
HMGB1P38-201ENST00000490557 ADGRL1O94910 1474 aa2.45□□□□□ -2.02
HMGB1P38-201ENST00000490557 DSCAML1Q8TD84 2053 aa2.45□□□□□ -2.02
HMGB1P38-201ENST00000490557 PLXNB3Q9ULL4 1909 aa2.45□□□□□ -2.02
HMGB1P38-201ENST00000490557 A0A087X0T9 212 aa2.45□□□□□ -2.02
HMGB1P38-201ENST00000490557 ODAMA1E959 279 aa2.45□□□□□ -2.02
HMGB1P38-201ENST00000490557 C17orf51A8MQB3 221 aa2.45□□□□□ -2.02
HMGB1P38-201ENST00000490557 J3QQQ9 107 aa2.45□□□□□ -2.02
HMGB1P38-201ENST00000490557 TMEM256-PLSCR3K7ERE1 68 aa2.45□□□□□ -2.02
HMGB1P38-201ENST00000490557 M0R378 163 aa2.45□□□□□ -2.02
HMGB1P38-201ENST00000490557 GNG7O60262 68 aa2.45□□□□□ -2.02
HMGB1P38-201ENST00000490557 LY6HO94772 140 aa2.45□□□□□ -2.02
HMGB1P38-201ENST00000490557 NAPSAO96009 420 aa2.45□□□□□ -2.02
HMGB1P38-201ENST00000490557 IGF2P01344 180 aa2.45□□□□□ -2.02
HMGB1P38-201ENST00000490557 IGHV1-69P01742 117 aa2.45□□□□□ -2.02
HMGB1P38-201ENST00000490557 CCL3P10147 92 aa2.45□□□□□ -2.02
HMGB1P38-201ENST00000490557 FABP2P12104 132 aa2.45□□□□□ -2.02
HMGB1P38-201ENST00000490557 HLA-DMBP28068 263 aa2.45□□□□□ -2.02
HMGB1P38-201ENST00000490557 RBM11P57052 281 aaKnown RBP2.45□□□□□ -2.02
HMGB1P38-201ENST00000490557 RPS25P62851 125 aaKnown RBP2.45□□□□□ -2.02
HMGB1P38-201ENST00000490557 LINC01554Q52M75 96 aa2.45□□□□□ -2.02
HMGB1P38-201ENST00000490557 RPP25LQ8N5L8 163 aaKnown RBP2.45□□□□□ -2.02
HMGB1P38-201ENST00000490557 CNEP1R1Q8N9A8 125 aa2.45□□□□□ -2.02
HMGB1P38-201ENST00000490557 BPIFB6Q8NFQ5 453 aa2.45□□□□□ -2.02
HMGB1P38-201ENST00000490557 STAG3L4Q8TBR4 150 aa2.45□□□□□ -2.02
HMGB1P38-201ENST00000490557 DCANP1Q8TF63 244 aa2.45□□□□□ -2.02
HMGB1P38-201ENST00000490557 YPEL2Q96QA6 119 aa2.45□□□□□ -2.02
HMGB1P38-201ENST00000490557 TTTY13Q9BZ97 58 aa2.45□□□□□ -2.02
HMGB1P38-201ENST00000490557 LINC00470Q9BZP3 86 aa2.45□□□□□ -2.02
HMGB1P38-201ENST00000490557 TMEM133Q9H2Q1 129 aa2.45□□□□□ -2.02
HMGB1P38-201ENST00000490557 OSTCQ9NRP0 149 aa2.45□□□□□ -2.02
HMGB1P38-201ENST00000490557 OR5AC2Q9NZP5 309 aa2.45□□□□□ -2.02
HMGB1P38-201ENST00000490557 DOCK6Q96HP0 2047 aa2.45□□□□□ -2.02
HMGB1P38-201ENST00000490557 CCNB3Q8WWL7 1395 aa2.45□□□□□ -2.02
HMGB1P38-201ENST00000490557 IBTKQ9P2D0 1353 aaPredicted RBP2.45□□□□□ -2.02
HMGB1P38-201ENST00000490557 CAMSAP2Q08AD1 1489 aa2.45□□□□□ -2.02
HMGB1P38-201ENST00000490557 ZNF518AQ6AHZ1 1483 aa2.45□□□□□ -2.02
HMGB1P38-201ENST00000490557 DICER1Q9UPY3 1922 aaKnown RBP2.44□□□□□ -2.02
HMGB1P38-201ENST00000490557 IGHV3OR16-8A0A075B7F1 116 aa2.44□□□□□ -2.02
HMGB1P38-201ENST00000490557 A0A0D9SEW6 157 aa2.44□□□□□ -2.02
HMGB1P38-201ENST00000490557 MEIS3P1A6NDR6 274 aa2.44□□□□□ -2.02
HMGB1P38-201ENST00000490557 TMEM212A6NML5 194 aa2.44□□□□□ -2.02
HMGB1P38-201ENST00000490557 UBFD1O14562 309 aaKnown RBP2.44□□□□□ -2.02
HMGB1P38-201ENST00000490557 NPYP01303 97 aa2.44□□□□□ -2.02
HMGB1P38-201ENST00000490557 MT-ND4LP03901 98 aa2.44□□□□□ -2.02
HMGB1P38-201ENST00000490557 SMIM6P0DI80 62 aa2.44□□□□□ -2.02
HMGB1P38-201ENST00000490557 P0DMU3 169 aa2.44□□□□□ -2.02
HMGB1P38-201ENST00000490557 FAM231AP0DMU4 169 aa2.44□□□□□ -2.02
HMGB1P38-201ENST00000490557 FAM231CP0DMU5 169 aa2.44□□□□□ -2.02
HMGB1P38-201ENST00000490557 KDELR1P24390 212 aa2.44□□□□□ -2.02
HMGB1P38-201ENST00000490557 PSMB8P28062 276 aa2.44□□□□□ -2.02
HMGB1P38-201ENST00000490557 TMBIM6P55061 237 aa2.44□□□□□ -2.02
HMGB1P38-201ENST00000490557 MRPS10P82664 201 aaKnown RBP2.44□□□□□ -2.02
HMGB1P38-201ENST00000490557 MSMO1Q15800 293 aa2.44□□□□□ -2.02
HMGB1P38-201ENST00000490557 IGFBP7Q16270 282 aa2.44□□□□□ -2.02
HMGB1P38-201ENST00000490557 BRD3OSQ6XYD6 125 aa2.44□□□□□ -2.02
HMGB1P38-201ENST00000490557 MIR17HGQ75NE6 70 aa2.44□□□□□ -2.02
HMGB1P38-201ENST00000490557 LINC00305Q7Z4B0 112 aa2.44□□□□□ -2.02
HMGB1P38-201ENST00000490557 HIST3H2BBQ8N257 126 aa2.44□□□□□ -2.02
HMGB1P38-201ENST00000490557 C3orf22Q8N5N4 141 aa2.44□□□□□ -2.02
HMGB1P38-201ENST00000490557 OR4C6Q8NH72 309 aa2.44□□□□□ -2.02
HMGB1P38-201ENST00000490557 TERB2Q8NHR7 220 aa2.44□□□□□ -2.02
HMGB1P38-201ENST00000490557 MAGOHBQ96A72 148 aaKnown RBP2.44□□□□□ -2.02
HMGB1P38-201ENST00000490557 GINS4Q9BRT9 223 aa2.44□□□□□ -2.02
HMGB1P38-201ENST00000490557 UPK3BQ9BT76 320 aa2.44□□□□□ -2.02
HMGB1P38-201ENST00000490557 ADAT1Q9BUB4 502 aaKnown RBP2.44□□□□□ -2.02
HMGB1P38-201ENST00000490557 IGHV3-73A0A0B4J1V6 119 aa2.43□□□□□ -2.02
HMGB1P38-201ENST00000490557 IGHV1-58A0A0C4DH39 117 aa2.43□□□□□ -2.02
HMGB1P38-201ENST00000490557 LOC107984640A0A0U1RRK4 108 aa2.43□□□□□ -2.02
HMGB1P38-201ENST00000490557 C19orf84I3L1E1 186 aa2.43□□□□□ -2.02
HMGB1P38-201ENST00000490557 IGHV3-7P01780 117 aa2.43□□□□□ -2.02
HMGB1P38-201ENST00000490557 IGLV7-43P04211 117 aa2.43□□□□□ -2.02
HMGB1P38-201ENST00000490557 DYNLT3P51808 116 aa2.43□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 88.5 ms