RNA–Protein interactions for RNA: ENST00000490543.5

SRRM1-217, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 5

Gene SRRM1, Length 673 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-217ENST00000490543 DKK2Q9UBU2 259 aa6.34□□□□□ -1.39
SRRM1-217ENST00000490543 IGHV3OR16-12A0A075B7B8 117 aa6.33□□□□□ -1.4
SRRM1-217ENST00000490543 HELTA6NFD8 242 aa6.33□□□□□ -1.4
SRRM1-217ENST00000490543 ZNF705FA8MVS1 300 aaPredicted RBP6.33□□□□□ -1.4
SRRM1-217ENST00000490543 H3BMM0 161 aa6.33□□□□□ -1.4
SRRM1-217ENST00000490543 SCGNO76038 276 aa6.33□□□□□ -1.4
SRRM1-217ENST00000490543 IGKV1-39P01597 117 aa6.33□□□□□ -1.4
SRRM1-217ENST00000490543 IGKV1D-39P04432 117 aa6.33□□□□□ -1.4
SRRM1-217ENST00000490543 ZNF705DP0CH99 300 aaPredicted RBP6.33□□□□□ -1.4
SRRM1-217ENST00000490543 ZNF705BP0CI00 300 aaPredicted RBP6.33□□□□□ -1.4
SRRM1-217ENST00000490543 GYPEP15421 78 aa6.33□□□□□ -1.4
SRRM1-217ENST00000490543 FXYD7P58549 80 aa6.33□□□□□ -1.4
SRRM1-217ENST00000490543 HSPE1P61604 102 aaKnown RBP6.33□□□□□ -1.4
SRRM1-217ENST00000490543 PRCDQ00LT1 54 aa6.33□□□□□ -1.4
SRRM1-217ENST00000490543 IZUMO4Q1ZYL8 232 aa6.33□□□□□ -1.4
SRRM1-217ENST00000490543 DHRS11Q6UWP2 260 aa6.33□□□□□ -1.4
SRRM1-217ENST00000490543 TSPAN14Q8NG11 270 aa6.33□□□□□ -1.4
SRRM1-217ENST00000490543 SEC22AQ96IW7 307 aa6.33□□□□□ -1.4
SRRM1-217ENST00000490543 NEU1Q99519 415 aa6.33□□□□□ -1.4
SRRM1-217ENST00000490543 NIPSNAP3BQ9BS92 247 aa6.33□□□□□ -1.4
SRRM1-217ENST00000490543 ZNF2Q9BSG1 426 aaPredicted RBP6.33□□□□□ -1.4
SRRM1-217ENST00000490543 C1QTNF4Q9BXJ3 329 aa6.33□□□□□ -1.4
SRRM1-217ENST00000490543 YTHDF1Q9BYJ9 559 aaKnown RBP6.33□□□□□ -1.4
SRRM1-217ENST00000490543 AUNIPQ9H7T9 357 aa6.33□□□□□ -1.4
SRRM1-217ENST00000490543 RRP15Q9Y3B9 282 aaKnown RBP6.33□□□□□ -1.4
SRRM1-217ENST00000490543 NBDYA0A0U1RRE5 68 aa6.32□□□□□ -1.4
SRRM1-217ENST00000490543 FAM90A26D6RGX4 464 aa6.32□□□□□ -1.4
SRRM1-217ENST00000490543 TMEM127O75204 238 aa6.32□□□□□ -1.4
SRRM1-217ENST00000490543 IGKV1-17P01599 117 aa6.32□□□□□ -1.4
SRRM1-217ENST00000490543 NUTF2P61970 127 aaKnown RBP6.32□□□□□ -1.4
SRRM1-217ENST00000490543 ERHP84090 104 aaKnown RBP6.32□□□□□ -1.4
SRRM1-217ENST00000490543 TBCEQ15813 527 aaPredicted RBP6.32□□□□□ -1.4
SRRM1-217ENST00000490543 TIGITQ495A1 244 aa6.32□□□□□ -1.4
SRRM1-217ENST00000490543 GDF5OSQ5U4N7 250 aa6.32□□□□□ -1.4
SRRM1-217ENST00000490543 SFXN4Q6P4A7 337 aa6.32□□□□□ -1.4
SRRM1-217ENST00000490543 SPATA12Q7Z6I5 190 aa6.32□□□□□ -1.4
SRRM1-217ENST00000490543 C6orf223Q8N319 242 aa6.32□□□□□ -1.4
SRRM1-217ENST00000490543 OR4A16Q8NH70 328 aa6.32□□□□□ -1.4
SRRM1-217ENST00000490543 GLMPQ8WWB7 406 aa6.32□□□□□ -1.4
SRRM1-217ENST00000490543 TSC22D3Q99576 134 aa6.32□□□□□ -1.4
SRRM1-217ENST00000490543 FNDC4Q9H6D8 234 aaPredicted RBP6.32□□□□□ -1.4
SRRM1-217ENST00000490543 TXNL4BQ9NX01 149 aaKnown RBP6.32□□□□□ -1.4
SRRM1-217ENST00000490543 EHFQ9NZC4 300 aa6.32□□□□□ -1.4
SRRM1-217ENST00000490543 FLG2Q5D862 2391 aaPredicted RBP6.31□□□□□ -1.4
SRRM1-217ENST00000490543 TMEM189A5PLL7 270 aa6.31□□□□□ -1.4
SRRM1-217ENST00000490543 SMIM9A6NGZ8 99 aa6.31□□□□□ -1.4
SRRM1-217ENST00000490543 GPR31O00270 319 aa6.31□□□□□ -1.4
SRRM1-217ENST00000490543 CLN5O75503 358 aa6.31□□□□□ -1.4
SRRM1-217ENST00000490543 IGKV3-20P01619 116 aa6.31□□□□□ -1.4
SRRM1-217ENST00000490543 PMP2P02689 132 aa6.31□□□□□ -1.4
SRRM1-217ENST00000490543 FGF9P31371 208 aaPredicted RBP6.31□□□□□ -1.4
SRRM1-217ENST00000490543 AQP4P55087 323 aa6.31□□□□□ -1.4
SRRM1-217ENST00000490543 PHLDA2Q53GA4 152 aa6.31□□□□□ -1.4
SRRM1-217ENST00000490543 CT83Q5H943 113 aa6.31□□□□□ -1.4
SRRM1-217ENST00000490543 C16orf54Q6UWD8 224 aa6.31□□□□□ -1.4
SRRM1-217ENST00000490543 H2BFWTQ7Z2G1 175 aa6.31□□□□□ -1.4
SRRM1-217ENST00000490543 CMTM1Q8IZ96 169 aa6.31□□□□□ -1.4
SRRM1-217ENST00000490543 ZNRF2Q8NHG8 242 aa6.31□□□□□ -1.4
SRRM1-217ENST00000490543 BORCS5Q969J3 196 aa6.31□□□□□ -1.4
SRRM1-217ENST00000490543 TMEM230Q96A57 120 aa6.31□□□□□ -1.4
SRRM1-217ENST00000490543 FXYD6Q9H0Q3 95 aa6.31□□□□□ -1.4
SRRM1-217ENST00000490543 RNF167Q9H6Y7 350 aa6.31□□□□□ -1.4
SRRM1-217ENST00000490543 TMED3Q9Y3Q3 217 aa6.31□□□□□ -1.4
SRRM1-217ENST00000490543 RFNGQ9Y644 331 aa6.31□□□□□ -1.4
SRRM1-217ENST00000490543 RNASE2P10153 161 aaKnown RBP6.3□□□□□ -1.4
SRRM1-217ENST00000490543 HLA-DRB4P13762 266 aa6.3□□□□□ -1.4
SRRM1-217ENST00000490543 SNCAP37840 140 aa6.3□□□□□ -1.4
SRRM1-217ENST00000490543 MXD1Q05195 221 aa6.3□□□□□ -1.4
SRRM1-217ENST00000490543 OXA1LQ15070 435 aa6.3□□□□□ -1.4
SRRM1-217ENST00000490543 GSG1LQ6UXU4 331 aa6.3□□□□□ -1.4
SRRM1-217ENST00000490543 OR4X1Q8NH49 305 aa6.3□□□□□ -1.4
SRRM1-217ENST00000490543 MRGPRFQ96AM1 343 aa6.3□□□□□ -1.4
SRRM1-217ENST00000490543 YTHDF2Q9Y5A9 579 aaKnown RBP6.3□□□□□ -1.4
SRRM1-217ENST00000490543 HLA-DRB4X5D2U9 266 aa6.3□□□□□ -1.4
SRRM1-217ENST00000490543 SRRM2Q9UQ35 2752 aaKnown RBP6.3□□□□□ -1.4
SRRM1-217ENST00000490543 A0A0B4J293 547 aa6.29□□□□□ -1.4
SRRM1-217ENST00000490543 SDC2P34741 201 aa6.29□□□□□ -1.4
SRRM1-217ENST00000490543 ETV6P41212 452 aa6.29□□□□□ -1.4
SRRM1-217ENST00000490543 CBX5P45973 191 aa6.29□□□□□ -1.4
SRRM1-217ENST00000490543 FAM3BP58499 235 aaPredicted RBP6.29□□□□□ -1.4
SRRM1-217ENST00000490543 SNRPD3P62318 126 aaKnown RBP6.29□□□□□ -1.4
SRRM1-217ENST00000490543 KCTD21Q4G0X4 260 aa6.29□□□□□ -1.4
SRRM1-217ENST00000490543 IDNKQ5T6J7 187 aa6.29□□□□□ -1.4
SRRM1-217ENST00000490543 TBC1D26Q86UD7 250 aa6.29□□□□□ -1.4
SRRM1-217ENST00000490543 C1orf158Q8N1D5 194 aa6.29□□□□□ -1.4
SRRM1-217ENST00000490543 ZNF709Q8N972 641 aa6.29□□□□□ -1.4
SRRM1-217ENST00000490543 NRG4Q8WWG1 115 aa6.29□□□□□ -1.4
SRRM1-217ENST00000490543 NARS2Q96I59 477 aaKnown RBP6.29□□□□□ -1.4
SRRM1-217ENST00000490543 ATG101Q9BSB4 218 aa6.29□□□□□ -1.4
SRRM1-217ENST00000490543 SLC35B3Q9H1N7 401 aa6.29□□□□□ -1.4
SRRM1-217ENST00000490543 VCXQ9H320 206 aa6.29□□□□□ -1.4
SRRM1-217ENST00000490543 IFT46Q9NQC8 304 aa6.29□□□□□ -1.4
SRRM1-217ENST00000490543 A0A0A6YYH2 397 aa6.28□□□□□ -1.4
SRRM1-217ENST00000490543 LOC102723971A0A1B0GUV8 181 aa6.28□□□□□ -1.4
SRRM1-217ENST00000490543 A6NJ64 397 aa6.28□□□□□ -1.4
SRRM1-217ENST00000490543 EPM2AB3EWF7 344 aa6.28□□□□□ -1.4
SRRM1-217ENST00000490543 IGKV1-5P01602 117 aa6.28□□□□□ -1.4
SRRM1-217ENST00000490543 PRM2P04554 102 aa6.28□□□□□ -1.4
SRRM1-217ENST00000490543 HNRNPCP07910 306 aaKnown RBP eCLIP6.28□□□□□ -1.4
SRRM1-217ENST00000490543 INAFM2P0DMQ5 153 aa6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms