RNA–Protein interactions for RNA: ENST00000490348.1

SRGAP3-208, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 2

Gene SRGAP3, Length 1,554 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-208ENST00000490348 RELQ04864 619 aaPredicted RBP10.88□□□□□ -0.67
SRGAP3-208ENST00000490348 TIGITQ495A1 244 aa10.88□□□□□ -0.67
SRGAP3-208ENST00000490348 TOMM20LQ6UXN7 152 aa10.88□□□□□ -0.67
SRGAP3-208ENST00000490348 ACY3Q96HD9 319 aa10.88□□□□□ -0.67
SRGAP3-208ENST00000490348 PRR25Q96S07 402 aa10.88□□□□□ -0.67
SRGAP3-208ENST00000490348 RAB40CQ96S21 281 aa10.88□□□□□ -0.67
SRGAP3-208ENST00000490348 ZFAND3Q9H8U3 227 aa10.88□□□□□ -0.67
SRGAP3-208ENST00000490348 MLXQ9UH92 298 aa10.88□□□□□ -0.67
SRGAP3-208ENST00000490348 STRAPQ9Y3F4 350 aaKnown RBP10.88□□□□□ -0.67
SRGAP3-208ENST00000490348 K7EIL1 84 aa10.87□□□□□ -0.67
SRGAP3-208ENST00000490348 LY86O95711 162 aa10.87□□□□□ -0.67
SRGAP3-208ENST00000490348 OR10J1P30954 320 aa10.87□□□□□ -0.67
SRGAP3-208ENST00000490348 TAS2R30P59541 319 aa10.87□□□□□ -0.67
SRGAP3-208ENST00000490348 RAB11AP62491 216 aa10.87□□□□□ -0.67
SRGAP3-208ENST00000490348 RPP30P78346 268 aaKnown RBP10.87□□□□□ -0.67
SRGAP3-208ENST00000490348 RAB32Q13637 225 aa10.87□□□□□ -0.67
SRGAP3-208ENST00000490348 RGS21Q2M5E4 152 aa10.87□□□□□ -0.67
SRGAP3-208ENST00000490348 DEFB114Q30KQ6 69 aa10.87□□□□□ -0.67
SRGAP3-208ENST00000490348 ETFRF1Q6IPR1 90 aa10.87□□□□□ -0.67
SRGAP3-208ENST00000490348 TMEM14EPQ6UXP3 125 aa10.87□□□□□ -0.67
SRGAP3-208ENST00000490348 C20orf24Q9BUV8 137 aa10.87□□□□□ -0.67
SRGAP3-208ENST00000490348 DAZ1Q9NQZ3 744 aaKnown RBP10.87□□□□□ -0.67
SRGAP3-208ENST00000490348 UFC1Q9Y3C8 167 aa10.87□□□□□ -0.67
SRGAP3-208ENST00000490348 LSM5Q9Y4Y9 91 aaKnown RBP10.87□□□□□ -0.67
SRGAP3-208ENST00000490348 PUS1Q9Y606 427 aaKnown RBP eCLIP10.87□□□□□ -0.67
SRGAP3-208ENST00000490348 IGKV1D-37A0A075B6S9 117 aa10.86□□□□□ -0.67
SRGAP3-208ENST00000490348 IGKV1OR2-108A0A075B7D4 117 aa10.86□□□□□ -0.67
SRGAP3-208ENST00000490348 SSNA1O43805 119 aa10.86□□□□□ -0.67
SRGAP3-208ENST00000490348 YIF1AO95070 293 aa10.86□□□□□ -0.67
SRGAP3-208ENST00000490348 ELLP55199 621 aaPredicted RBP10.86□□□□□ -0.67
SRGAP3-208ENST00000490348 OXA1LQ15070 435 aa10.86□□□□□ -0.67
SRGAP3-208ENST00000490348 CD300EQ496F6 205 aaPredicted RBP10.86□□□□□ -0.67
SRGAP3-208ENST00000490348 ZNF256Q9Y2P7 627 aaPredicted RBP10.86□□□□□ -0.67
SRGAP3-208ENST00000490348 DNAH9Q9NYC9 4486 aa10.86□□□□□ -0.67
SRGAP3-208ENST00000490348 K7EMT4 169 aa10.86□□□□□ -0.67
SRGAP3-208ENST00000490348 TSC22D2O75157 780 aa10.86□□□□□ -0.67
SRGAP3-208ENST00000490348 METTL15P1P0C7V9 234 aa10.86□□□□□ -0.67
SRGAP3-208ENST00000490348 ZNF600Q6ZNG1 722 aa10.86□□□□□ -0.67
SRGAP3-208ENST00000490348 OR1S2Q8NGQ3 325 aa10.86□□□□□ -0.67
SRGAP3-208ENST00000490348 hCG_2014768A0A024R1R8 64 aa10.85□□□□□ -0.67
SRGAP3-208ENST00000490348 TRAV30A0A087WSZ9 112 aa10.85□□□□□ -0.67
SRGAP3-208ENST00000490348 SCAF4O95104 1147 aaKnown RBP10.85□□□□□ -0.67
SRGAP3-208ENST00000490348 S100A10P60903 97 aa10.85□□□□□ -0.67
SRGAP3-208ENST00000490348 ARL16Q0P5N6 197 aa10.85□□□□□ -0.67
SRGAP3-208ENST00000490348 OR8G2PQ6IF36 304 aa10.85□□□□□ -0.67
SRGAP3-208ENST00000490348 BTNL8Q6UX41 500 aa10.85□□□□□ -0.67
SRGAP3-208ENST00000490348 ACOT7LQ6ZUV0 252 aa10.85□□□□□ -0.67
SRGAP3-208ENST00000490348 NMES1Q9C002 83 aa10.85□□□□□ -0.67
SRGAP3-208ENST00000490348 MRPL27Q9P0M9 148 aaKnown RBP10.85□□□□□ -0.67
SRGAP3-208ENST00000490348 APOHP02749 345 aaPredicted RBP10.84□□□□□ -0.67
SRGAP3-208ENST00000490348 GP9P14770 177 aa10.84□□□□□ -0.67
SRGAP3-208ENST00000490348 CXCL3P19876 107 aa10.84□□□□□ -0.67
SRGAP3-208ENST00000490348 YPEL3P61236 119 aaPredicted RBP10.84□□□□□ -0.67
SRGAP3-208ENST00000490348 ZNF90Q03938 601 aa10.84□□□□□ -0.67
SRGAP3-208ENST00000490348 DYNLRB2Q8TF09 96 aa10.84□□□□□ -0.67
SRGAP3-208ENST00000490348 MARC2Q969Z3 335 aa10.84□□□□□ -0.67
SRGAP3-208ENST00000490348 SLC35E1Q96K37 410 aa10.84□□□□□ -0.67
SRGAP3-208ENST00000490348 TECRQ9NZ01 308 aaKnown RBP10.84□□□□□ -0.67
SRGAP3-208ENST00000490348 MGAT4CQ9UBM8 478 aa10.84□□□□□ -0.67
SRGAP3-208ENST00000490348 ZMAT5Q9UDW3 170 aaKnown RBP10.84□□□□□ -0.67
SRGAP3-208ENST00000490348 IGHV3-49A0A0A0MS15 119 aa10.83□□□□□ -0.68
SRGAP3-208ENST00000490348 ZNF785A8K8V0 405 aa10.83□□□□□ -0.68
SRGAP3-208ENST00000490348 H0YIZ8 118 aa10.83□□□□□ -0.68
SRGAP3-208ENST00000490348 DEDDO75618 318 aa10.83□□□□□ -0.68
SRGAP3-208ENST00000490348 TMEM61Q8N0U2 210 aa10.83□□□□□ -0.68
SRGAP3-208ENST00000490348 THAP8Q8NA92 274 aa10.83□□□□□ -0.68
SRGAP3-208ENST00000490348 IGHV3OR16-13A0A075B7E8 117 aa10.82□□□□□ -0.68
SRGAP3-208ENST00000490348 TRAV14DV4A0A0A6YYC5 116 aa10.82□□□□□ -0.68
SRGAP3-208ENST00000490348 IGHV3-74A0A0B4J1X5 117 aa10.82□□□□□ -0.68
SRGAP3-208ENST00000490348 IGHV7-4-1A0A0J9YVY3 117 aa10.82□□□□□ -0.68
SRGAP3-208ENST00000490348 FAM24AA6NFZ4 105 aa10.82□□□□□ -0.68
SRGAP3-208ENST00000490348 L7N2F9 121 aa10.82□□□□□ -0.68
SRGAP3-208ENST00000490348 CHEK1O14757 476 aa10.82□□□□□ -0.68
SRGAP3-208ENST00000490348 HNRNPCP07910 306 aaKnown RBP eCLIP10.82□□□□□ -0.68
SRGAP3-208ENST00000490348 PSG1P11464 419 aa10.82□□□□□ -0.68
SRGAP3-208ENST00000490348 VAMP2P63027 116 aa10.82□□□□□ -0.68
SRGAP3-208ENST00000490348 LRRC37A5PQ49AS3 106 aa10.82□□□□□ -0.68
SRGAP3-208ENST00000490348 LCN12Q6JVE5 192 aa10.82□□□□□ -0.68
SRGAP3-208ENST00000490348 LILRB2Q8N423 598 aa10.82□□□□□ -0.68
SRGAP3-208ENST00000490348 OR11H7Q8NGC8 314 aa10.82□□□□□ -0.68
SRGAP3-208ENST00000490348 OR2K2Q8NGT1 345 aa10.82□□□□□ -0.68
SRGAP3-208ENST00000490348 LYRM2Q9NU23 88 aaPredicted RBP10.82□□□□□ -0.68
SRGAP3-208ENST00000490348 OR5AC2Q9NZP5 309 aa10.82□□□□□ -0.68
SRGAP3-208ENST00000490348 SMPXQ9UHP9 88 aa10.82□□□□□ -0.68
SRGAP3-208ENST00000490348 LSM4Q9Y4Z0 139 aaKnown RBP10.82□□□□□ -0.68
SRGAP3-208ENST00000490348 IGSF23A1L1A6 192 aa10.82□□□□□ -0.68
SRGAP3-208ENST00000490348 ZFP92A6NM28 416 aa10.82□□□□□ -0.68
SRGAP3-208ENST00000490348 TOMM40O96008 361 aa10.82□□□□□ -0.68
SRGAP3-208ENST00000490348 RD3LP0DJH9 198 aa10.82□□□□□ -0.68
SRGAP3-208ENST00000490348 CAV2P51636 162 aa10.82□□□□□ -0.68
SRGAP3-208ENST00000490348 RRAS2P62070 204 aaPredicted RBP10.82□□□□□ -0.68
SRGAP3-208ENST00000490348 USF2Q15853 346 aaPredicted RBP10.82□□□□□ -0.68
SRGAP3-208ENST00000490348 MRAPQ8TCY5 172 aa10.82□□□□□ -0.68
SRGAP3-208ENST00000490348 PPP1R1CQ8WVI7 109 aa10.82□□□□□ -0.68
SRGAP3-208ENST00000490348 RNF2Q99496 336 aa10.82□□□□□ -0.68
SRGAP3-208ENST00000490348 RHPN1-AS1Q9BWJ2 59 aa10.82□□□□□ -0.68
SRGAP3-208ENST00000490348 SCGB2A1O75556 95 aa10.81□□□□□ -0.68
SRGAP3-208ENST00000490348 CST7O76096 145 aa10.81□□□□□ -0.68
SRGAP3-208ENST00000490348 CRYBB3P26998 211 aa10.81□□□□□ -0.68
SRGAP3-208ENST00000490348 BCAP31P51572 246 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms