RNA–Protein interactions for RNA: ENST00000490035.6

LSAMP-205, Transcript of limbic system associated membrane protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSAMP, Length 9,446 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSAMP-205ENST00000490035 DENND4CQ5VZ89 1909 aa7.39□□□□□ -1.23
LSAMP-205ENST00000490035 PGPEP1Q9NXJ5 209 aa7.39□□□□□ -1.23
LSAMP-205ENST00000490035 TFF3Q07654 80 aa7.38□□□□□ -1.23
LSAMP-205ENST00000490035 C1QL2Q7Z5L3 287 aa7.38□□□□□ -1.23
LSAMP-205ENST00000490035 OR13A1Q8NGR1 328 aa7.38□□□□□ -1.23
LSAMP-205ENST00000490035 LINC00477Q96M19 166 aa7.38□□□□□ -1.23
LSAMP-205ENST00000490035 LY6EQ16553 131 aa7.38□□□□□ -1.23
LSAMP-205ENST00000490035 TDGF1P13385 188 aa7.38□□□□□ -1.23
LSAMP-205ENST00000490035 DPH3Q96FX2 82 aa7.38□□□□□ -1.23
LSAMP-205ENST00000490035 GSN-AS1Q9NRJ2 163 aa7.38□□□□□ -1.23
LSAMP-205ENST00000490035 ITGB1BP1O14713 200 aa7.38□□□□□ -1.23
LSAMP-205ENST00000490035 HOXA3O43365 443 aaPredicted RBP7.38□□□□□ -1.23
LSAMP-205ENST00000490035 LAGE3Q14657 143 aa7.38□□□□□ -1.23
LSAMP-205ENST00000490035 EFNB3Q15768 340 aa7.38□□□□□ -1.23
LSAMP-205ENST00000490035 LEAP2Q969E1 77 aa7.38□□□□□ -1.23
LSAMP-205ENST00000490035 MRPL20Q9BYC9 149 aaKnown RBP7.38□□□□□ -1.23
LSAMP-205ENST00000490035 NRN1Q9NPD7 142 aa7.38□□□□□ -1.23
LSAMP-205ENST00000490035 HEPN1Q6WQI6 88 aa7.38□□□□□ -1.23
LSAMP-205ENST00000490035 TIAF1O95411 115 aa7.38□□□□□ -1.23
LSAMP-205ENST00000490035 C1QTNF4Q9BXJ3 329 aa7.38□□□□□ -1.23
LSAMP-205ENST00000490035 TRGV2A0A075B6R0 118 aa7.38□□□□□ -1.23
LSAMP-205ENST00000490035 LOC102724200A0A096LPH7 203 aaPredicted RBP7.38□□□□□ -1.23
LSAMP-205ENST00000490035 PDE6HQ13956 83 aa7.38□□□□□ -1.23
LSAMP-205ENST00000490035 TGIF1Q15583 401 aa7.38□□□□□ -1.23
LSAMP-205ENST00000490035 IGKCP01834 107 aa7.38□□□□□ -1.23
LSAMP-205ENST00000490035 CRPP02741 224 aa7.38□□□□□ -1.23
LSAMP-205ENST00000490035 WNT2P09544 360 aa7.38□□□□□ -1.23
LSAMP-205ENST00000490035 OR9G9P0C7N8 305 aa7.38□□□□□ -1.23
LSAMP-205ENST00000490035 RNASE4P34096 147 aaKnown RBP7.38□□□□□ -1.23
LSAMP-205ENST00000490035 MDKP21741 143 aaPredicted RBP7.37□□□□□ -1.23
LSAMP-205ENST00000490035 SLC25A15Q9Y619 301 aa7.37□□□□□ -1.23
LSAMP-205ENST00000490035 C1QCP02747 245 aa7.37□□□□□ -1.23
LSAMP-205ENST00000490035 SLC25A39Q9BZJ4 359 aaPredicted RBP7.37□□□□□ -1.23
LSAMP-205ENST00000490035 C7orf69Q9H7B7 122 aa7.37□□□□□ -1.23
LSAMP-205ENST00000490035 MED12Q93074 2177 aa7.37□□□□□ -1.23
LSAMP-205ENST00000490035 CACNA1EQ15878 2313 aa7.37□□□□□ -1.23
LSAMP-205ENST00000490035 ATXN7O15265 892 aaPredicted RBP7.37□□□□□ -1.23
LSAMP-205ENST00000490035 WDR83OSQ9Y284 106 aa7.37□□□□□ -1.23
LSAMP-205ENST00000490035 CACNA1BQ00975 2339 aa7.37□□□□□ -1.23
LSAMP-205ENST00000490035 RFPL3SP0C7P2 107 aa7.37□□□□□ -1.23
LSAMP-205ENST00000490035 PAX8Q06710 450 aa7.37□□□□□ -1.23
LSAMP-205ENST00000490035 CLEC19AQ6UXS0 136 aa7.37□□□□□ -1.23
LSAMP-205ENST00000490035 PLEKHB2Q96CS7 222 aa7.37□□□□□ -1.23
LSAMP-205ENST00000490035 PRADC1Q9BSG0 188 aa7.37□□□□□ -1.23
LSAMP-205ENST00000490035 SIGLEC15Q6ZMC9 328 aa7.37□□□□□ -1.23
LSAMP-205ENST00000490035 PSG8Q9UQ74 426 aa7.37□□□□□ -1.23
LSAMP-205ENST00000490035 SRRM5B3KS81 715 aa7.37□□□□□ -1.23
LSAMP-205ENST00000490035 CD7P09564 240 aa7.37□□□□□ -1.23
LSAMP-205ENST00000490035 ZFP36L1Q07352 338 aaKnown RBP7.37□□□□□ -1.23
LSAMP-205ENST00000490035 ITLN2Q8WWU7 325 aaPredicted RBP7.37□□□□□ -1.23
LSAMP-205ENST00000490035 MIR17HGQ75NE6 70 aa7.37□□□□□ -1.23
LSAMP-205ENST00000490035 MRPL27Q9P0M9 148 aaKnown RBP7.37□□□□□ -1.23
LSAMP-205ENST00000490035 MESP2Q0VG99 397 aa7.36□□□□□ -1.23
LSAMP-205ENST00000490035 ZNF585BQ52M93 769 aa7.36□□□□□ -1.23
LSAMP-205ENST00000490035 LHFPL1Q86WI0 220 aa7.36□□□□□ -1.23
LSAMP-205ENST00000490035 SPTAN1Q13813 2472 aaKnown RBP7.36□□□□□ -1.23
LSAMP-205ENST00000490035 FAM223BA6NKX1 122 aa7.36□□□□□ -1.23
LSAMP-205ENST00000490035 LILRA1O75019 489 aa7.36□□□□□ -1.23
LSAMP-205ENST00000490035 NDUFS6O75380 124 aaKnown RBP7.36□□□□□ -1.23
LSAMP-205ENST00000490035 ATXN8Q156A1 80 aa7.36□□□□□ -1.23
LSAMP-205ENST00000490035 FAM223AQ8IWN6 122 aa7.36□□□□□ -1.23
LSAMP-205ENST00000490035 DNAJC30Q96LL9 226 aa7.36□□□□□ -1.23
LSAMP-205ENST00000490035 C18orf15Q96N68 181 aa7.36□□□□□ -1.23
LSAMP-205ENST00000490035 HAX1O00165 279 aa7.36□□□□□ -1.23
LSAMP-205ENST00000490035 C1QTNF9P0C862 333 aa7.36□□□□□ -1.23
LSAMP-205ENST00000490035 MGST2Q99735 147 aa7.36□□□□□ -1.23
LSAMP-205ENST00000490035 GFRA4Q9GZZ7 299 aa7.36□□□□□ -1.23
LSAMP-205ENST00000490035 CHTOPQ9Y3Y2 248 aaKnown RBP7.36□□□□□ -1.23
LSAMP-205ENST00000490035 DENND4AQ7Z401 1863 aa7.36□□□□□ -1.23
LSAMP-205ENST00000490035 GGTLC3B5MD39 225 aa7.36□□□□□ -1.23
LSAMP-205ENST00000490035 FBLN7Q53RD9 439 aa7.36□□□□□ -1.23
LSAMP-205ENST00000490035 COLCA1Q6ZS62 124 aa7.36□□□□□ -1.23
LSAMP-205ENST00000490035 PLSCR4Q9NRQ2 329 aa7.36□□□□□ -1.23
LSAMP-205ENST00000490035 KIAA1671Q9BY89 1806 aa7.36□□□□□ -1.23
LSAMP-205ENST00000490035 GATA3P23771 443 aa7.36□□□□□ -1.23
LSAMP-205ENST00000490035 KIF26AQ9ULI4 1882 aaPredicted RBP7.36□□□□□ -1.23
LSAMP-205ENST00000490035 CFPP27918 469 aa7.36□□□□□ -1.23
LSAMP-205ENST00000490035 SEPSECSQ9HD40 501 aaKnown RBP7.36□□□□□ -1.23
LSAMP-205ENST00000490035 FOXA3P55318 350 aaPredicted RBP7.36□□□□□ -1.23
LSAMP-205ENST00000490035 VGLL1Q99990 258 aa7.36□□□□□ -1.23
LSAMP-205ENST00000490035 MBNL3Q9NUK0 354 aaKnown RBP7.36□□□□□ -1.23
LSAMP-205ENST00000490035 THBDP07204 575 aa7.35□□□□□ -1.23
LSAMP-205ENST00000490035 LGALS1P09382 135 aaKnown RBP7.35□□□□□ -1.23
LSAMP-205ENST00000490035 SPINK2P20155 84 aa7.35□□□□□ -1.23
LSAMP-205ENST00000490035 ATP5G3P48201 142 aa7.35□□□□□ -1.23
LSAMP-205ENST00000490035 SHANK1Q9Y566 2161 aa7.35□□□□□ -1.23
LSAMP-205ENST00000490035 AMBPP02760 352 aa7.35□□□□□ -1.23
LSAMP-205ENST00000490035 PCP4P48539 62 aa7.35□□□□□ -1.23
LSAMP-205ENST00000490035 PAX2Q02962 417 aa7.35□□□□□ -1.23
LSAMP-205ENST00000490035 SRSF6Q13247 344 aaKnown RBP7.35□□□□□ -1.23
LSAMP-205ENST00000490035 Q5BKY6 102 aa7.35□□□□□ -1.23
LSAMP-205ENST00000490035 TEX38Q6PEX7 206 aa7.35□□□□□ -1.23
LSAMP-205ENST00000490035 C9orf139Q6ZV77 190 aa7.35□□□□□ -1.23
LSAMP-205ENST00000490035 UMODP07911 640 aa7.35□□□□□ -1.23
LSAMP-205ENST00000490035 ZNF415Q09FC8 603 aa7.35□□□□□ -1.23
LSAMP-205ENST00000490035 RPRMLQ8N4K4 120 aa7.35□□□□□ -1.23
LSAMP-205ENST00000490035 IFI27L1Q96BM0 104 aa7.35□□□□□ -1.23
LSAMP-205ENST00000490035 C14orf144Q96I85 54 aa7.35□□□□□ -1.23
LSAMP-205ENST00000490035 BEX4Q9NWD9 120 aaPredicted RBP7.35□□□□□ -1.23
LSAMP-205ENST00000490035 PSMB11A5LHX3 300 aa7.35□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms