RNA–Protein interactions for RNA: ENST00000489961.1

VPS13D-210, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 5

Gene VPS13D, Length 443 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-210ENST00000489961 IGLC1P0CG04 106 aa8.28□□□□□ -1.08
VPS13D-210ENST00000489961 YPEL3P61236 119 aaPredicted RBP8.28□□□□□ -1.08
VPS13D-210ENST00000489961 RRAS2P62070 204 aaPredicted RBP8.28□□□□□ -1.08
VPS13D-210ENST00000489961 FCN2Q15485 313 aa8.28□□□□□ -1.08
VPS13D-210ENST00000489961 BEAN1Q3B7T3 259 aa8.28□□□□□ -1.08
VPS13D-210ENST00000489961 TIGITQ495A1 244 aa8.28□□□□□ -1.08
VPS13D-210ENST00000489961 LRRC37A5PQ49AS3 106 aa8.28□□□□□ -1.08
VPS13D-210ENST00000489961 KPRPQ5T749 579 aaPredicted RBP8.28□□□□□ -1.08
VPS13D-210ENST00000489961 IL34Q6ZMJ4 242 aa8.28□□□□□ -1.08
VPS13D-210ENST00000489961 ACOT7LQ6ZUV0 252 aa8.28□□□□□ -1.08
VPS13D-210ENST00000489961 DYNLRB2Q8TF09 96 aa8.28□□□□□ -1.08
VPS13D-210ENST00000489961 PPP1R1CQ8WVI7 109 aa8.28□□□□□ -1.08
VPS13D-210ENST00000489961 MARC2Q969Z3 335 aa8.28□□□□□ -1.08
VPS13D-210ENST00000489961 GINS3Q9BRX5 216 aa8.28□□□□□ -1.08
VPS13D-210ENST00000489961 C11orf1Q9H5F2 150 aa8.28□□□□□ -1.08
VPS13D-210ENST00000489961 DAZ1Q9NQZ3 744 aaKnown RBP8.28□□□□□ -1.08
VPS13D-210ENST00000489961 LYRM2Q9NU23 88 aaPredicted RBP8.28□□□□□ -1.08
VPS13D-210ENST00000489961 MGAM2Q2M2H8 2515 aa8.27□□□□□ -1.09
VPS13D-210ENST00000489961 TMEM213A2RRL7 107 aa8.27□□□□□ -1.09
VPS13D-210ENST00000489961 FAM24AA6NFZ4 105 aa8.27□□□□□ -1.09
VPS13D-210ENST00000489961 PMS2P5A8MQ11 134 aa8.27□□□□□ -1.09
VPS13D-210ENST00000489961 E5RGE8 158 aa8.27□□□□□ -1.09
VPS13D-210ENST00000489961 K7EMT4 169 aa8.27□□□□□ -1.09
VPS13D-210ENST00000489961 CCNKO75909 580 aa8.27□□□□□ -1.09
VPS13D-210ENST00000489961 IGKV1-17P01599 117 aa8.27□□□□□ -1.09
VPS13D-210ENST00000489961 FABP1P07148 127 aa8.27□□□□□ -1.09
VPS13D-210ENST00000489961 FOLR2P14207 255 aa8.27□□□□□ -1.09
VPS13D-210ENST00000489961 CXCL3P19876 107 aa8.27□□□□□ -1.09
VPS13D-210ENST00000489961 CBLN1P23435 193 aa8.27□□□□□ -1.09
VPS13D-210ENST00000489961 DLK1P80370 383 aa8.27□□□□□ -1.09
VPS13D-210ENST00000489961 AKR1C1Q04828 323 aa8.27□□□□□ -1.09
VPS13D-210ENST00000489961 EGFEM1PQ0D2K5 195 aa8.27□□□□□ -1.09
VPS13D-210ENST00000489961 TM4SF20Q53R12 229 aa8.27□□□□□ -1.09
VPS13D-210ENST00000489961 TOMM20LQ6UXN7 152 aa8.27□□□□□ -1.09
VPS13D-210ENST00000489961 STX12Q86Y82 276 aa8.27□□□□□ -1.09
VPS13D-210ENST00000489961 Q8WTZ3 238 aa8.27□□□□□ -1.09
VPS13D-210ENST00000489961 MRPL27Q9P0M9 148 aaKnown RBP8.27□□□□□ -1.09
VPS13D-210ENST00000489961 PUS1Q9Y606 427 aaKnown RBP eCLIP8.27□□□□□ -1.09
VPS13D-210ENST00000489961 IGHV3OR16-8A0A075B7F1 116 aa8.26□□□□□ -1.09
VPS13D-210ENST00000489961 SMCO3A2RU48 225 aa8.26□□□□□ -1.09
VPS13D-210ENST00000489961 FNDC10F2Z333 226 aa8.26□□□□□ -1.09
VPS13D-210ENST00000489961 MPC2O95563 127 aa8.26□□□□□ -1.09
VPS13D-210ENST00000489961 TOMM40O96008 361 aa8.26□□□□□ -1.09
VPS13D-210ENST00000489961 IGLV1-51P01701 117 aa8.26□□□□□ -1.09
VPS13D-210ENST00000489961 RD3LP0DJH9 198 aa8.26□□□□□ -1.09
VPS13D-210ENST00000489961 P2RY1P47900 373 aa8.26□□□□□ -1.09
VPS13D-210ENST00000489961 SULT1A1P50225 295 aa8.26□□□□□ -1.09
VPS13D-210ENST00000489961 TMEM252Q8N6L7 170 aa8.26□□□□□ -1.09
VPS13D-210ENST00000489961 OR11H7Q8NGC8 314 aa8.26□□□□□ -1.09
VPS13D-210ENST00000489961 OR2K2Q8NGT1 345 aa8.26□□□□□ -1.09
VPS13D-210ENST00000489961 ASB13Q8WXK3 278 aa8.26□□□□□ -1.09
VPS13D-210ENST00000489961 WDR89Q96FK6 387 aaPredicted RBP8.26□□□□□ -1.09
VPS13D-210ENST00000489961 GGACTQ9BVM4 153 aa8.26□□□□□ -1.09
VPS13D-210ENST00000489961 SLC25A31Q9H0C2 315 aa8.26□□□□□ -1.09
VPS13D-210ENST00000489961 ZFAND3Q9H8U3 227 aa8.26□□□□□ -1.09
VPS13D-210ENST00000489961 TECRQ9NZ01 308 aaKnown RBP8.26□□□□□ -1.09
VPS13D-210ENST00000489961 NOTCH3Q9UM47 2321 aa8.25□□□□□ -1.09
VPS13D-210ENST00000489961 TRAV14DV4A0A0A6YYC5 116 aa8.25□□□□□ -1.09
VPS13D-210ENST00000489961 IGSF23A1L1A6 192 aa8.25□□□□□ -1.09
VPS13D-210ENST00000489961 ZNF207O43670 478 aaKnown RBP8.25□□□□□ -1.09
VPS13D-210ENST00000489961 CST7O76096 145 aa8.25□□□□□ -1.09
VPS13D-210ENST00000489961 C8orf88P0DMB2 117 aa8.25□□□□□ -1.09
VPS13D-210ENST00000489961 EDN2P20800 178 aa8.25□□□□□ -1.09
VPS13D-210ENST00000489961 BMI1P35226 326 aa8.25□□□□□ -1.09
VPS13D-210ENST00000489961 HBG1P69891 147 aa8.25□□□□□ -1.09
VPS13D-210ENST00000489961 HBG2P69892 147 aa8.25□□□□□ -1.09
VPS13D-210ENST00000489961 SLC38A11Q08AI6 406 aa8.25□□□□□ -1.09
VPS13D-210ENST00000489961 LCN12Q6JVE5 192 aa8.25□□□□□ -1.09
VPS13D-210ENST00000489961 ADAMTSL5Q6ZMM2 481 aa8.25□□□□□ -1.09
VPS13D-210ENST00000489961 TMEM144Q7Z5S9 345 aa8.25□□□□□ -1.09
VPS13D-210ENST00000489961 HAPLN4Q86UW8 402 aa8.25□□□□□ -1.09
VPS13D-210ENST00000489961 LILRB2Q8N423 598 aa8.25□□□□□ -1.09
VPS13D-210ENST00000489961 THAP8Q8NA92 274 aa8.25□□□□□ -1.09
VPS13D-210ENST00000489961 ZNF414Q96IQ9 312 aa8.25□□□□□ -1.09
VPS13D-210ENST00000489961 TRGV9Q99603 122 aa8.25□□□□□ -1.09
VPS13D-210ENST00000489961 NPVFQ9HCQ7 196 aa8.25□□□□□ -1.09
VPS13D-210ENST00000489961 OR5AC2Q9NZP5 309 aa8.25□□□□□ -1.09
VPS13D-210ENST00000489961 IGKV1D-37A0A075B6S9 117 aa8.24□□□□□ -1.09
VPS13D-210ENST00000489961 IGHV7-4-1A0A0J9YVY3 117 aa8.24□□□□□ -1.09
VPS13D-210ENST00000489961 H0YIZ8 118 aa8.24□□□□□ -1.09
VPS13D-210ENST00000489961 IL4P05112 153 aa8.24□□□□□ -1.09
VPS13D-210ENST00000489961 GIPP09681 153 aaPredicted RBP8.24□□□□□ -1.09
VPS13D-210ENST00000489961 PSG1P11464 419 aa8.24□□□□□ -1.09
VPS13D-210ENST00000489961 NPPCP23582 126 aa8.24□□□□□ -1.09
VPS13D-210ENST00000489961 S100A11P31949 105 aa8.24□□□□□ -1.09
VPS13D-210ENST00000489961 KRTAP10-11P60412 298 aa8.24□□□□□ -1.09
VPS13D-210ENST00000489961 RAP2BP61225 183 aa8.24□□□□□ -1.09
VPS13D-210ENST00000489961 FGL1Q08830 312 aa8.24□□□□□ -1.09
VPS13D-210ENST00000489961 ARL16Q0P5N6 197 aa8.24□□□□□ -1.09
VPS13D-210ENST00000489961 DEFB114Q30KQ6 69 aa8.24□□□□□ -1.09
VPS13D-210ENST00000489961 BTNL8Q6UX41 500 aa8.24□□□□□ -1.09
VPS13D-210ENST00000489961 TMEM217Q8N7C4 229 aa8.24□□□□□ -1.09
VPS13D-210ENST00000489961 OR51G1Q8NGK1 321 aa8.24□□□□□ -1.09
VPS13D-210ENST00000489961 THAP6Q8TBB0 222 aa8.24□□□□□ -1.09
VPS13D-210ENST00000489961 NARS2Q96I59 477 aaKnown RBP8.24□□□□□ -1.09
VPS13D-210ENST00000489961 METTL26Q96S19 204 aa8.24□□□□□ -1.09
VPS13D-210ENST00000489961 SMPXQ9UHP9 88 aa8.24□□□□□ -1.09
VPS13D-210ENST00000489961 ZNF256Q9Y2P7 627 aaPredicted RBP8.24□□□□□ -1.09
VPS13D-210ENST00000489961 IGKV1OR2-108A0A075B7D4 117 aa8.23□□□□□ -1.09
VPS13D-210ENST00000489961 A0A1W2PS18 150 aa8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms