RNA–Protein interactions for RNA: ENST00000489898.1

SRSF4-204, Transcript of serine and arginine rich splicing factor 4, humanhuman

TSL 3

Gene SRSF4, Length 393 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF4-204ENST00000489898 MS4A6AQ9H2W1 248 aa8.64□□□□□ -1.03
SRSF4-204ENST00000489898 HSPB7Q9UBY9 170 aa8.64□□□□□ -1.03
SRSF4-204ENST00000489898 TRAV14DV4A0A0A6YYC5 116 aa8.63□□□□□ -1.03
SRSF4-204ENST00000489898 TRAV2A0A0B4J234 112 aa8.63□□□□□ -1.03
SRSF4-204ENST00000489898 PRSS46E5RG02 174 aa8.63□□□□□ -1.03
SRSF4-204ENST00000489898 SPRY2O43597 315 aa8.63□□□□□ -1.03
SRSF4-204ENST00000489898 PITX3O75364 302 aa8.63□□□□□ -1.03
SRSF4-204ENST00000489898 ERHP84090 104 aaKnown RBP8.63□□□□□ -1.03
SRSF4-204ENST00000489898 IL22RA2Q969J5 263 aa8.63□□□□□ -1.03
SRSF4-204ENST00000489898 KIAA1109Q2LD37 5005 aa8.63□□□□□ -1.03
SRSF4-204ENST00000489898 IGKV3-7A0A075B6H7 116 aa8.62□□□□□ -1.03
SRSF4-204ENST00000489898 CORTO00230 105 aa8.62□□□□□ -1.03
SRSF4-204ENST00000489898 IFNA17P01571 189 aa8.62□□□□□ -1.03
SRSF4-204ENST00000489898 BMI1P35226 326 aa8.62□□□□□ -1.03
SRSF4-204ENST00000489898 OPRK1P41145 380 aa8.62□□□□□ -1.03
SRSF4-204ENST00000489898 NPBWR1P48145 328 aa8.62□□□□□ -1.03
SRSF4-204ENST00000489898 TFPI2P48307 235 aa8.62□□□□□ -1.03
SRSF4-204ENST00000489898 APOC4P55056 127 aa8.62□□□□□ -1.03
SRSF4-204ENST00000489898 RBMS2Q15434 407 aaKnown RBP8.62□□□□□ -1.03
SRSF4-204ENST00000489898 LAMTOR1Q6IAA8 161 aa8.62□□□□□ -1.03
SRSF4-204ENST00000489898 LYZL2Q7Z4W2 148 aa8.62□□□□□ -1.03
SRSF4-204ENST00000489898 TRPT1Q86TN4 253 aaKnown RBP8.62□□□□□ -1.03
SRSF4-204ENST00000489898 GBGT1Q8N5D6 347 aa8.62□□□□□ -1.03
SRSF4-204ENST00000489898 SLC24A4Q8NFF2 622 aa8.62□□□□□ -1.03
SRSF4-204ENST00000489898 C17orf77Q96MU5 243 aa8.62□□□□□ -1.03
SRSF4-204ENST00000489898 PRRT1Q99946 306 aa8.62□□□□□ -1.03
SRSF4-204ENST00000489898 SRRQ9GZT4 340 aa8.62□□□□□ -1.03
SRSF4-204ENST00000489898 IGKV1OR2-108A0A075B7D4 117 aa8.61□□□□□ -1.03
SRSF4-204ENST00000489898 A0A0B4J2A0 478 aa8.61□□□□□ -1.03
SRSF4-204ENST00000489898 DISC1C4P0D8 188 aa8.61□□□□□ -1.03
SRSF4-204ENST00000489898 UBE2CO00762 179 aa8.61□□□□□ -1.03
SRSF4-204ENST00000489898 YIF1AO95070 293 aa8.61□□□□□ -1.03
SRSF4-204ENST00000489898 PTTG1O95997 202 aa8.61□□□□□ -1.03
SRSF4-204ENST00000489898 IL7P13232 177 aa8.61□□□□□ -1.03
SRSF4-204ENST00000489898 HTR2BP41595 481 aa8.61□□□□□ -1.03
SRSF4-204ENST00000489898 P2RY1P47900 373 aa8.61□□□□□ -1.03
SRSF4-204ENST00000489898 RND2P52198 227 aa8.61□□□□□ -1.03
SRSF4-204ENST00000489898 DHODHQ02127 395 aa8.61□□□□□ -1.03
SRSF4-204ENST00000489898 LEMD1Q68G75 181 aa8.61□□□□□ -1.03
SRSF4-204ENST00000489898 MZT2BQ6NZ67 158 aa8.61□□□□□ -1.03
SRSF4-204ENST00000489898 Q8NAQ8 132 aa8.61□□□□□ -1.03
SRSF4-204ENST00000489898 DUSP18Q8NEJ0 188 aa8.61□□□□□ -1.03
SRSF4-204ENST00000489898 SDHCQ99643 169 aaPredicted RBP8.61□□□□□ -1.03
SRSF4-204ENST00000489898 C11orf68Q9H3H3 251 aaKnown RBP8.61□□□□□ -1.03
SRSF4-204ENST00000489898 CTNNBIP1Q9NSA3 81 aaPredicted RBP8.61□□□□□ -1.03
SRSF4-204ENST00000489898 SHPKQ9UHJ6 478 aa8.61□□□□□ -1.03
SRSF4-204ENST00000489898 C14orf166Q9Y224 244 aaKnown RBP8.61□□□□□ -1.03
SRSF4-204ENST00000489898 CENPXA8MT69 81 aa8.6□□□□□ -1.03
SRSF4-204ENST00000489898 NPY1RP25929 384 aa8.6□□□□□ -1.03
SRSF4-204ENST00000489898 BTCP35070 178 aa8.6□□□□□ -1.03
SRSF4-204ENST00000489898 SNCAP37840 140 aa8.6□□□□□ -1.03
SRSF4-204ENST00000489898 AP3S2P59780 193 aa8.6□□□□□ -1.03
SRSF4-204ENST00000489898 C16orf54Q6UWD8 224 aa8.6□□□□□ -1.03
SRSF4-204ENST00000489898 CENPSQ8N2Z9 138 aa8.6□□□□□ -1.03
SRSF4-204ENST00000489898 CSNK1G2-AS1Q8NCQ2 148 aa8.6□□□□□ -1.03
SRSF4-204ENST00000489898 RNASEH2CQ8TDP1 164 aaKnown RBP8.6□□□□□ -1.03
SRSF4-204ENST00000489898 RRNAD1Q96FB5 475 aaKnown RBP8.6□□□□□ -1.03
SRSF4-204ENST00000489898 GINS3Q9BRX5 216 aa8.6□□□□□ -1.03
SRSF4-204ENST00000489898 ATG12O94817 140 aa8.59□□□□□ -1.03
SRSF4-204ENST00000489898 SULT1A3P0DMM9 295 aa8.59□□□□□ -1.03
SRSF4-204ENST00000489898 SULT1A4P0DMN0 295 aa8.59□□□□□ -1.03
SRSF4-204ENST00000489898 DEFB131AP59861 70 aa8.59□□□□□ -1.03
SRSF4-204ENST00000489898 YPEL3P61236 119 aaPredicted RBP8.59□□□□□ -1.03
SRSF4-204ENST00000489898 PMS2P11Q13670 270 aa8.59□□□□□ -1.03
SRSF4-204ENST00000489898 LRTM2Q8N967 370 aa8.59□□□□□ -1.03
SRSF4-204ENST00000489898 ENKURQ8TC29 256 aa8.59□□□□□ -1.03
SRSF4-204ENST00000489898 GRAMD2BQ96HH9 432 aa8.59□□□□□ -1.03
SRSF4-204ENST00000489898 RBKSQ9H477 322 aa8.59□□□□□ -1.03
SRSF4-204ENST00000489898 X6R8D5 127 aa8.59□□□□□ -1.03
SRSF4-204ENST00000489898 hCG_2014768A0A024R1R8 64 aa8.58□□□□□ -1.04
SRSF4-204ENST00000489898 LINC00854A0A1B0GVQ3 168 aa8.58□□□□□ -1.04
SRSF4-204ENST00000489898 SOCS3O14543 225 aa8.58□□□□□ -1.04
SRSF4-204ENST00000489898 BUB3O43684 328 aa8.58□□□□□ -1.04
SRSF4-204ENST00000489898 TOMM40O96008 361 aa8.58□□□□□ -1.04
SRSF4-204ENST00000489898 OR10J1P30954 320 aa8.58□□□□□ -1.04
SRSF4-204ENST00000489898 SMCO1Q147U7 214 aa8.58□□□□□ -1.04
SRSF4-204ENST00000489898 GSG1LQ6UXU4 331 aa8.58□□□□□ -1.04
SRSF4-204ENST00000489898 OR1S2Q8NGQ3 325 aa8.58□□□□□ -1.04
SRSF4-204ENST00000489898 GATAD1Q8WUU5 269 aa8.58□□□□□ -1.04
SRSF4-204ENST00000489898 CSTL1Q9H114 145 aa8.58□□□□□ -1.04
SRSF4-204ENST00000489898 ZNF705EA8MWA4 302 aaPredicted RBP8.57□□□□□ -1.04
SRSF4-204ENST00000489898 PFDN1O60925 122 aa8.57□□□□□ -1.04
SRSF4-204ENST00000489898 ZNF688P0C7X2 276 aa8.57□□□□□ -1.04
SRSF4-204ENST00000489898 RBMY1A1P0DJD3 496 aaKnown RBP8.57□□□□□ -1.04
SRSF4-204ENST00000489898 RBMY1CP0DJD4 496 aa8.57□□□□□ -1.04
SRSF4-204ENST00000489898 SLC25A4P12235 298 aa8.57□□□□□ -1.04
SRSF4-204ENST00000489898 FAUP35544 74 aaKnown RBP8.57□□□□□ -1.04
SRSF4-204ENST00000489898 ASAH1Q13510 395 aa8.57□□□□□ -1.04
SRSF4-204ENST00000489898 PPP1R1AQ13522 171 aa8.57□□□□□ -1.04
SRSF4-204ENST00000489898 RBMY1FQ15415 496 aaKnown RBP8.57□□□□□ -1.04
SRSF4-204ENST00000489898 CEMP1Q6PRD7 247 aaPredicted RBP8.57□□□□□ -1.04
SRSF4-204ENST00000489898 TOMM5Q8N4H5 51 aa8.57□□□□□ -1.04
SRSF4-204ENST00000489898 DTD1Q8TEA8 209 aa8.57□□□□□ -1.04
SRSF4-204ENST00000489898 NPIPB3Q92617 1050 aa8.57□□□□□ -1.04
SRSF4-204ENST00000489898 PDCD10Q9BUL8 212 aa8.57□□□□□ -1.04
SRSF4-204ENST00000489898 HEYLQ9NQ87 328 aaPredicted RBP8.57□□□□□ -1.04
SRSF4-204ENST00000489898 NACAE9PAV3 2078 aa8.57□□□□□ -1.04
SRSF4-204ENST00000489898 NUPR2A6NF83 97 aa8.56□□□□□ -1.04
SRSF4-204ENST00000489898 KNCNA6PVL3 124 aa8.56□□□□□ -1.04
SRSF4-204ENST00000489898 CEBPZOSA8MTT3 80 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms