RNA–Protein interactions for RNA: ENST00000489861.2

COL9A1-209, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 3

Gene COL9A1, Length 243 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-209ENST00000489861 RSL24D1Q9UHA3 163 aaKnown RBP5.24□□□□□ -1.57
COL9A1-209ENST00000489861 KCNIP3Q9Y2W7 256 aa5.24□□□□□ -1.57
COL9A1-209ENST00000489861 S4R3C0 116 aa5.24□□□□□ -1.57
COL9A1-209ENST00000489861 TRAV30A0A087WSZ9 112 aa5.23□□□□□ -1.57
COL9A1-209ENST00000489861 IGHV7-4-1A0A0J9YVY3 117 aa5.23□□□□□ -1.57
COL9A1-209ENST00000489861 A0A1B0GW64 132 aa5.23□□□□□ -1.57
COL9A1-209ENST00000489861 INS-IGF2F8WCM5 200 aa5.23□□□□□ -1.57
COL9A1-209ENST00000489861 CTDSPLO15194 276 aa5.23□□□□□ -1.57
COL9A1-209ENST00000489861 ST8SIA3O43173 380 aa5.23□□□□□ -1.57
COL9A1-209ENST00000489861 AKAIN1P0CW23 69 aa5.23□□□□□ -1.57
COL9A1-209ENST00000489861 SPP1P10451 314 aa5.23□□□□□ -1.57
COL9A1-209ENST00000489861 FAUP35544 74 aaKnown RBP5.23□□□□□ -1.57
COL9A1-209ENST00000489861 AP2S1P53680 142 aaPredicted RBP5.23□□□□□ -1.57
COL9A1-209ENST00000489861 TMBIM6P55061 237 aa5.23□□□□□ -1.57
COL9A1-209ENST00000489861 NUTF2P61970 127 aaKnown RBP5.23□□□□□ -1.57
COL9A1-209ENST00000489861 WT1-ASQ06250 92 aa5.23□□□□□ -1.57
COL9A1-209ENST00000489861 TMEM187Q14656 261 aa5.23□□□□□ -1.57
COL9A1-209ENST00000489861 CTF1Q16619 201 aa5.23□□□□□ -1.57
COL9A1-209ENST00000489861 ODF3L2Q3SX64 289 aa5.23□□□□□ -1.57
COL9A1-209ENST00000489861 SCGB2B2Q4G0G5 96 aa5.23□□□□□ -1.57
COL9A1-209ENST00000489861 ETFRF1Q6IPR1 90 aa5.23□□□□□ -1.57
COL9A1-209ENST00000489861 STEAP1BQ6NZ63 245 aa5.23□□□□□ -1.57
COL9A1-209ENST00000489861 ZNF600Q6ZNG1 722 aa5.23□□□□□ -1.57
COL9A1-209ENST00000489861 LHFPL1Q86WI0 220 aa5.23□□□□□ -1.57
COL9A1-209ENST00000489861 UBE2DNLQ8IWF7 75 aa5.23□□□□□ -1.57
COL9A1-209ENST00000489861 STHQ8IWL8 128 aa5.23□□□□□ -1.57
COL9A1-209ENST00000489861 Q8NAQ8 132 aa5.23□□□□□ -1.57
COL9A1-209ENST00000489861 OR10W1Q8NGF6 305 aa5.23□□□□□ -1.57
COL9A1-209ENST00000489861 MRGPRFQ96AM1 343 aa5.23□□□□□ -1.57
COL9A1-209ENST00000489861 OR10C1Q96KK4 312 aa5.23□□□□□ -1.57
COL9A1-209ENST00000489861 ABHD1Q96SE0 405 aa5.23□□□□□ -1.57
COL9A1-209ENST00000489861 CHRDL1Q9BU40 450 aa5.23□□□□□ -1.57
COL9A1-209ENST00000489861 NDUFAF3Q9BU61 184 aa5.23□□□□□ -1.57
COL9A1-209ENST00000489861 RHPN1-AS1Q9BWJ2 59 aa5.23□□□□□ -1.57
COL9A1-209ENST00000489861 NXF2Q9GZY0 626 aaKnown RBP5.23□□□□□ -1.57
COL9A1-209ENST00000489861 CCDC59Q9P031 241 aaKnown RBP5.23□□□□□ -1.57
COL9A1-209ENST00000489861 SMPXQ9UHP9 88 aa5.23□□□□□ -1.57
COL9A1-209ENST00000489861 SCP2D1Q9UJQ7 156 aa5.23□□□□□ -1.57
COL9A1-209ENST00000489861 IGHV3-35A0A0C4DH35 117 aa5.22□□□□□ -1.57
COL9A1-209ENST00000489861 TEX13DA0A0J9YY54 714 aaPredicted RBP5.22□□□□□ -1.57
COL9A1-209ENST00000489861 M0QYG6 137 aa5.22□□□□□ -1.57
COL9A1-209ENST00000489861 CHEK1O14757 476 aa5.22□□□□□ -1.57
COL9A1-209ENST00000489861 GSTZ1O43708 216 aaPredicted RBP5.22□□□□□ -1.57
COL9A1-209ENST00000489861 IFNA21P01568 189 aa5.22□□□□□ -1.57
COL9A1-209ENST00000489861 CD3DP04234 171 aa5.22□□□□□ -1.57
COL9A1-209ENST00000489861 ANXA3P12429 323 aa5.22□□□□□ -1.57
COL9A1-209ENST00000489861 HOXA1P49639 335 aaPredicted RBP5.22□□□□□ -1.57
COL9A1-209ENST00000489861 AP3S2P59780 193 aa5.22□□□□□ -1.57
COL9A1-209ENST00000489861 RPL11P62913 178 aaKnown RBP5.22□□□□□ -1.57
COL9A1-209ENST00000489861 SRPXP78539 464 aa5.22□□□□□ -1.57
COL9A1-209ENST00000489861 IL18Q14116 193 aa5.22□□□□□ -1.57
COL9A1-209ENST00000489861 TCF24Q7RTU0 167 aa5.22□□□□□ -1.57
COL9A1-209ENST00000489861 OR52E5Q8NH55 327 aa5.22□□□□□ -1.57
COL9A1-209ENST00000489861 OR52I2Q8NH67 350 aa5.22□□□□□ -1.57
COL9A1-209ENST00000489861 PINX1Q96BK5 328 aaKnown RBP5.22□□□□□ -1.57
COL9A1-209ENST00000489861 DIRAS2Q96HU8 199 aa5.22□□□□□ -1.57
COL9A1-209ENST00000489861 C17orf77Q96MU5 243 aa5.22□□□□□ -1.57
COL9A1-209ENST00000489861 METTL26Q96S19 204 aa5.22□□□□□ -1.57
COL9A1-209ENST00000489861 C1QTNF4Q9BXJ3 329 aa5.22□□□□□ -1.57
COL9A1-209ENST00000489861 CTNNBIP1Q9NSA3 81 aaPredicted RBP5.22□□□□□ -1.57
COL9A1-209ENST00000489861 KLK11Q9UBX7 282 aa5.22□□□□□ -1.57
COL9A1-209ENST00000489861 NSG2Q9Y328 171 aa5.22□□□□□ -1.57
COL9A1-209ENST00000489861 DEFB131BA0A096LNP1 70 aa5.21□□□□□ -1.58
COL9A1-209ENST00000489861 TEX48A0A1B0GUV7 120 aa5.21□□□□□ -1.58
COL9A1-209ENST00000489861 HELTA6NFD8 242 aa5.21□□□□□ -1.58
COL9A1-209ENST00000489861 K7EIM0 57 aa5.21□□□□□ -1.58
COL9A1-209ENST00000489861 MT-CO2P00403 227 aa5.21□□□□□ -1.58
COL9A1-209ENST00000489861 SLC25A4P12235 298 aa5.21□□□□□ -1.58
COL9A1-209ENST00000489861 NPPCP23582 126 aa5.21□□□□□ -1.58
COL9A1-209ENST00000489861 UCP1P25874 307 aa5.21□□□□□ -1.58
COL9A1-209ENST00000489861 S100A7P31151 101 aa5.21□□□□□ -1.58
COL9A1-209ENST00000489861 OPRK1P41145 380 aa5.21□□□□□ -1.58
COL9A1-209ENST00000489861 HTR2BP41595 481 aa5.21□□□□□ -1.58
COL9A1-209ENST00000489861 RPL5P46777 297 aaKnown RBP5.21□□□□□ -1.58
COL9A1-209ENST00000489861 ALDH3B2P48448 385 aa5.21□□□□□ -1.58
COL9A1-209ENST00000489861 PPP5CP53041 499 aa5.21□□□□□ -1.58
COL9A1-209ENST00000489861 ATP5IP56385 69 aaPredicted RBP5.21□□□□□ -1.58
COL9A1-209ENST00000489861 SPCS3P61009 180 aa5.21□□□□□ -1.58
COL9A1-209ENST00000489861 C19orf35Q6ZS72 473 aa5.21□□□□□ -1.58
COL9A1-209ENST00000489861 C6orf223Q8N319 242 aa5.21□□□□□ -1.58
COL9A1-209ENST00000489861 OR13C8Q8NGS7 320 aa5.21□□□□□ -1.58
COL9A1-209ENST00000489861 SMIM4Q8WVI0 70 aa5.21□□□□□ -1.58
COL9A1-209ENST00000489861 DEDD2Q8WXF8 326 aa5.21□□□□□ -1.58
COL9A1-209ENST00000489861 RBPMSQ93062 196 aaKnown RBP5.21□□□□□ -1.58
COL9A1-209ENST00000489861 IL22RA2Q969J5 263 aa5.21□□□□□ -1.58
COL9A1-209ENST00000489861 TMA7Q9Y2S6 64 aaKnown RBP5.21□□□□□ -1.58
COL9A1-209ENST00000489861 IGHV4-28A0A0C4DH34 117 aa5.2□□□□□ -1.58
COL9A1-209ENST00000489861 I3L2K1 104 aa5.2□□□□□ -1.58
COL9A1-209ENST00000489861 CDS2O95674 445 aa5.2□□□□□ -1.58
COL9A1-209ENST00000489861 CA1P00915 261 aaPredicted RBP5.2□□□□□ -1.58
COL9A1-209ENST00000489861 CTSGP08311 255 aa5.2□□□□□ -1.58
COL9A1-209ENST00000489861 SMIM18P0DKX4 95 aa5.2□□□□□ -1.58
COL9A1-209ENST00000489861 MIFP14174 115 aa5.2□□□□□ -1.58
COL9A1-209ENST00000489861 S100A5P33763 92 aa5.2□□□□□ -1.58
COL9A1-209ENST00000489861 TFPI2P48307 235 aa5.2□□□□□ -1.58
COL9A1-209ENST00000489861 SNRPD3P62318 126 aaKnown RBP5.2□□□□□ -1.58
COL9A1-209ENST00000489861 ZNF124Q15973 351 aa5.2□□□□□ -1.58
COL9A1-209ENST00000489861 RNASE12Q5GAN4 147 aaKnown RBP5.2□□□□□ -1.58
COL9A1-209ENST00000489861 CLVS1Q8IUQ0 354 aaPredicted RBP5.2□□□□□ -1.58
COL9A1-209ENST00000489861 RNASEH2CQ8TDP1 164 aaKnown RBP5.2□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 71.9 ms