RNA–Protein interactions for RNA: ENST00000489741.1

PRPF40A-210, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 3

Gene PRPF40A, Length 776 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-210ENST00000489741 LOC100506127A0A0U1RQW1 187 aa4.61□□□□□ -1.67
PRPF40A-210ENST00000489741 IFITM10A6NMD0 228 aa4.61□□□□□ -1.67
PRPF40A-210ENST00000489741 INS-IGF2F8WCM5 200 aa4.61□□□□□ -1.67
PRPF40A-210ENST00000489741 GPR31O00270 319 aa4.61□□□□□ -1.67
PRPF40A-210ENST00000489741 NUPL2O15504 423 aaKnown RBP4.61□□□□□ -1.67
PRPF40A-210ENST00000489741 DFFBO76075 338 aa4.61□□□□□ -1.67
PRPF40A-210ENST00000489741 MT-CO2P00403 227 aa4.61□□□□□ -1.67
PRPF40A-210ENST00000489741 APOHP02749 345 aaPredicted RBP4.61□□□□□ -1.67
PRPF40A-210ENST00000489741 CD5P06127 495 aa4.61□□□□□ -1.67
PRPF40A-210ENST00000489741 P0C879 139 aa4.61□□□□□ -1.67
PRPF40A-210ENST00000489741 TAS2R46P59540 309 aa4.61□□□□□ -1.67
PRPF40A-210ENST00000489741 TAS2R20P59543 309 aa4.61□□□□□ -1.67
PRPF40A-210ENST00000489741 HSPE1P61604 102 aaKnown RBP4.61□□□□□ -1.67
PRPF40A-210ENST00000489741 PRCDQ00LT1 54 aa4.61□□□□□ -1.67
PRPF40A-210ENST00000489741 Q56UQ5 140 aa4.61□□□□□ -1.67
PRPF40A-210ENST00000489741 TOMM20LQ6UXN7 152 aa4.61□□□□□ -1.67
PRPF40A-210ENST00000489741 CMTM1Q8IZ96 169 aa4.61□□□□□ -1.67
PRPF40A-210ENST00000489741 UBAC2Q8NBM4 344 aa4.61□□□□□ -1.67
PRPF40A-210ENST00000489741 OR6F1Q8NGZ6 308 aa4.61□□□□□ -1.67
PRPF40A-210ENST00000489741 OR11H2Q8NH07 326 aa4.61□□□□□ -1.67
PRPF40A-210ENST00000489741 GPX8Q8TED1 209 aa4.61□□□□□ -1.67
PRPF40A-210ENST00000489741 SLC25A46Q96AG3 418 aa4.61□□□□□ -1.67
PRPF40A-210ENST00000489741 S100A16Q96FQ6 103 aaKnown RBP4.61□□□□□ -1.67
PRPF40A-210ENST00000489741 HINT2Q9BX68 163 aa4.61□□□□□ -1.67
PRPF40A-210ENST00000489741 C6orf62Q9GZU0 229 aaPredicted RBP4.61□□□□□ -1.67
PRPF40A-210ENST00000489741 FXYD6Q9H0Q3 95 aa4.61□□□□□ -1.67
PRPF40A-210ENST00000489741 IFT46Q9NQC8 304 aa4.61□□□□□ -1.67
PRPF40A-210ENST00000489741 APLNQ9ULZ1 77 aa4.61□□□□□ -1.67
PRPF40A-210ENST00000489741 DNAH17Q9UFH2 4485 aa4.61□□□□□ -1.67
PRPF40A-210ENST00000489741 PKHD1P08F94 4074 aa4.61□□□□□ -1.67
PRPF40A-210ENST00000489741 IGHV3-49A0A0A0MS15 119 aa4.6□□□□□ -1.67
PRPF40A-210ENST00000489741 YIF1AO95070 293 aa4.6□□□□□ -1.67
PRPF40A-210ENST00000489741 TMEM50AO95807 157 aa4.6□□□□□ -1.67
PRPF40A-210ENST00000489741 IGHV3-48P01763 117 aa4.6□□□□□ -1.67
PRPF40A-210ENST00000489741 PRSS3P35030 304 aa4.6□□□□□ -1.67
PRPF40A-210ENST00000489741 HRH1P35367 487 aa4.6□□□□□ -1.67
PRPF40A-210ENST00000489741 TGFBR1P36897 503 aa4.6□□□□□ -1.67
PRPF40A-210ENST00000489741 TCTAP57738 103 aa4.6□□□□□ -1.67
PRPF40A-210ENST00000489741 UBE2NLQ5JXB2 153 aa4.6□□□□□ -1.67
PRPF40A-210ENST00000489741 LPCAT3Q6P1A2 487 aa4.6□□□□□ -1.67
PRPF40A-210ENST00000489741 TCF24Q7RTU0 167 aa4.6□□□□□ -1.67
PRPF40A-210ENST00000489741 CROCCP3Q8IVE0 287 aa4.6□□□□□ -1.67
PRPF40A-210ENST00000489741 GBGT1Q8N5D6 347 aa4.6□□□□□ -1.67
PRPF40A-210ENST00000489741 Q8NAQ8 132 aa4.6□□□□□ -1.67
PRPF40A-210ENST00000489741 DUSP18Q8NEJ0 188 aa4.6□□□□□ -1.67
PRPF40A-210ENST00000489741 OR5H2Q8NGV7 314 aa4.6□□□□□ -1.67
PRPF40A-210ENST00000489741 C11orf45Q8TAV5 145 aa4.6□□□□□ -1.67
PRPF40A-210ENST00000489741 MFFQ9GZY8 342 aa4.6□□□□□ -1.67
PRPF40A-210ENST00000489741 MS4A6AQ9H2W1 248 aa4.6□□□□□ -1.67
PRPF40A-210ENST00000489741 HRH4Q9H3N8 390 aa4.6□□□□□ -1.67
PRPF40A-210ENST00000489741 RYR1P21817 5038 aa4.59□□□□□ -1.67
PRPF40A-210ENST00000489741 IGHV3OR16-13A0A075B7E8 117 aa4.59□□□□□ -1.67
PRPF40A-210ENST00000489741 IGHV3-74A0A0B4J1X5 117 aa4.59□□□□□ -1.67
PRPF40A-210ENST00000489741 A0A0B4J293 547 aa4.59□□□□□ -1.67
PRPF40A-210ENST00000489741 IGHV4-28A0A0C4DH34 117 aa4.59□□□□□ -1.67
PRPF40A-210ENST00000489741 A0A1B0GU03 582 aa4.59□□□□□ -1.67
PRPF40A-210ENST00000489741 ATP6V1G2O95670 118 aa4.59□□□□□ -1.67
PRPF40A-210ENST00000489741 IGKV1-5P01602 117 aa4.59□□□□□ -1.67
PRPF40A-210ENST00000489741 IFNA4P05014 189 aa4.59□□□□□ -1.67
PRPF40A-210ENST00000489741 RBMY1A1P0DJD3 496 aaKnown RBP4.59□□□□□ -1.67
PRPF40A-210ENST00000489741 RBMY1CP0DJD4 496 aa4.59□□□□□ -1.67
PRPF40A-210ENST00000489741 CRYBB3P26998 211 aa4.59□□□□□ -1.67
PRPF40A-210ENST00000489741 HLA-DMAP28067 261 aa4.59□□□□□ -1.67
PRPF40A-210ENST00000489741 TFPI2P48307 235 aa4.59□□□□□ -1.67
PRPF40A-210ENST00000489741 DEFB131AP59861 70 aa4.59□□□□□ -1.67
PRPF40A-210ENST00000489741 RND3P61587 244 aa4.59□□□□□ -1.67
PRPF40A-210ENST00000489741 PAFAH1B2P68402 229 aa4.59□□□□□ -1.67
PRPF40A-210ENST00000489741 ERHP84090 104 aaKnown RBP4.59□□□□□ -1.67
PRPF40A-210ENST00000489741 TMEM187Q14656 261 aa4.59□□□□□ -1.67
PRPF40A-210ENST00000489741 RBMY1FQ15415 496 aaKnown RBP4.59□□□□□ -1.67
PRPF40A-210ENST00000489741 KCTD21Q4G0X4 260 aa4.59□□□□□ -1.67
PRPF40A-210ENST00000489741 PHLDA2Q53GA4 152 aa4.59□□□□□ -1.67
PRPF40A-210ENST00000489741 TMEM69Q5SWH9 247 aa4.59□□□□□ -1.67
PRPF40A-210ENST00000489741 ZNF600Q6ZNG1 722 aa4.59□□□□□ -1.67
PRPF40A-210ENST00000489741 Q6ZTC4 211 aa4.59□□□□□ -1.67
PRPF40A-210ENST00000489741 H2BFWTQ7Z2G1 175 aa4.59□□□□□ -1.67
PRPF40A-210ENST00000489741 TBC1D26Q86UD7 250 aa4.59□□□□□ -1.67
PRPF40A-210ENST00000489741 FAM24BQ8N5W8 94 aa4.59□□□□□ -1.67
PRPF40A-210ENST00000489741 SAMD12Q8N8I0 201 aa4.59□□□□□ -1.67
PRPF40A-210ENST00000489741 CSNK1G2-AS1Q8NCQ2 148 aa4.59□□□□□ -1.67
PRPF40A-210ENST00000489741 TSPAN14Q8NG11 270 aa4.59□□□□□ -1.67
PRPF40A-210ENST00000489741 OR4A16Q8NH70 328 aa4.59□□□□□ -1.67
PRPF40A-210ENST00000489741 YIPF6Q96EC8 236 aa4.59□□□□□ -1.67
PRPF40A-210ENST00000489741 CMTM3Q96MX0 182 aa4.59□□□□□ -1.67
PRPF40A-210ENST00000489741 CTDSP1Q9GZU7 261 aa4.59□□□□□ -1.67
PRPF40A-210ENST00000489741 Q9H521 79 aa4.59□□□□□ -1.67
PRPF40A-210ENST00000489741 PUS1Q9Y606 427 aaKnown RBP eCLIP4.59□□□□□ -1.67
PRPF40A-210ENST00000489741 IGKV3-7A0A075B6H7 116 aa4.58□□□□□ -1.68
PRPF40A-210ENST00000489741 ZNF705EA8MWA4 302 aaPredicted RBP4.58□□□□□ -1.68
PRPF40A-210ENST00000489741 C11orf94C9JXX5 98 aa4.58□□□□□ -1.68
PRPF40A-210ENST00000489741 K7EQG2 157 aa4.58□□□□□ -1.68
PRPF40A-210ENST00000489741 DEFB4AO15263 64 aa4.58□□□□□ -1.68
PRPF40A-210ENST00000489741 ST8SIA3O43173 380 aa4.58□□□□□ -1.68
PRPF40A-210ENST00000489741 GNG7O60262 68 aa4.58□□□□□ -1.68
PRPF40A-210ENST00000489741 CA1P00915 261 aaPredicted RBP4.58□□□□□ -1.68
PRPF40A-210ENST00000489741 IGKV1-17P01599 117 aa4.58□□□□□ -1.68
PRPF40A-210ENST00000489741 EIF4EP06730 217 aaKnown RBP4.58□□□□□ -1.68
PRPF40A-210ENST00000489741 RNASE2P10153 161 aaKnown RBP4.58□□□□□ -1.68
PRPF40A-210ENST00000489741 RPL5P46777 297 aaKnown RBP4.58□□□□□ -1.68
PRPF40A-210ENST00000489741 NPBWR1P48145 328 aa4.58□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 448.5 ms