RNA–Protein interactions for RNA: ENST00000489728.1

CPSF7-212, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 488 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-212ENST00000489728 FAM25EA8MYX2 175 aa8.38□□□□□ -1.07
CPSF7-212ENST00000489728 PRSS46E5RG02 174 aa8.38□□□□□ -1.07
CPSF7-212ENST00000489728 CCSO14618 274 aa8.38□□□□□ -1.07
CPSF7-212ENST00000489728 SCGB1D2O95969 90 aa8.38□□□□□ -1.07
CPSF7-212ENST00000489728 MBPP02686 304 aaPredicted RBP8.38□□□□□ -1.07
CPSF7-212ENST00000489728 CYCSP99999 105 aaKnown RBP8.38□□□□□ -1.07
CPSF7-212ENST00000489728 IL15RAQ13261 267 aa8.38□□□□□ -1.07
CPSF7-212ENST00000489728 GAMTQ14353 236 aa8.38□□□□□ -1.07
CPSF7-212ENST00000489728 MLANAQ16655 118 aa8.38□□□□□ -1.07
CPSF7-212ENST00000489728 CD300EQ496F6 205 aaPredicted RBP8.38□□□□□ -1.07
CPSF7-212ENST00000489728 TM4SF20Q53R12 229 aa8.38□□□□□ -1.07
CPSF7-212ENST00000489728 SPANXN5Q5MJ07 72 aa8.38□□□□□ -1.07
CPSF7-212ENST00000489728 TOMM20LQ6UXN7 152 aa8.38□□□□□ -1.07
CPSF7-212ENST00000489728 C20orf24Q9BUV8 137 aa8.38□□□□□ -1.07
CPSF7-212ENST00000489728 ZFAND3Q9H8U3 227 aa8.38□□□□□ -1.07
CPSF7-212ENST00000489728 PSENENQ9NZ42 101 aa8.38□□□□□ -1.07
CPSF7-212ENST00000489728 PUS1Q9Y606 427 aaKnown RBP eCLIP8.38□□□□□ -1.07
CPSF7-212ENST00000489728 SORL1Q92673 2214 aa8.37□□□□□ -1.07
CPSF7-212ENST00000489728 TRAV14DV4A0A0A6YYC5 116 aa8.37□□□□□ -1.07
CPSF7-212ENST00000489728 IGHV7-4-1A0A0J9YVY3 117 aa8.37□□□□□ -1.07
CPSF7-212ENST00000489728 YIF1AO95070 293 aa8.37□□□□□ -1.07
CPSF7-212ENST00000489728 TOMM40O96008 361 aa8.37□□□□□ -1.07
CPSF7-212ENST00000489728 PRB2P02812 416 aaPredicted RBP8.37□□□□□ -1.07
CPSF7-212ENST00000489728 PVALBP20472 110 aaPredicted RBP8.37□□□□□ -1.07
CPSF7-212ENST00000489728 PAX9P55771 341 aa8.37□□□□□ -1.07
CPSF7-212ENST00000489728 TMEM14EPQ6UXP3 125 aa8.37□□□□□ -1.07
CPSF7-212ENST00000489728 GTSCR1Q86UQ5 136 aa8.37□□□□□ -1.07
CPSF7-212ENST00000489728 Q8WTZ3 238 aa8.37□□□□□ -1.07
CPSF7-212ENST00000489728 NPIPB3Q92617 1050 aa8.37□□□□□ -1.07
CPSF7-212ENST00000489728 ACY3Q96HD9 319 aa8.37□□□□□ -1.07
CPSF7-212ENST00000489728 PRR25Q96S07 402 aa8.37□□□□□ -1.07
CPSF7-212ENST00000489728 NMES1Q9C002 83 aa8.37□□□□□ -1.07
CPSF7-212ENST00000489728 TMEM231Q9H6L2 316 aa8.37□□□□□ -1.07
CPSF7-212ENST00000489728 MLXQ9UH92 298 aa8.37□□□□□ -1.07
CPSF7-212ENST00000489728 SMPXQ9UHP9 88 aa8.37□□□□□ -1.07
CPSF7-212ENST00000489728 LSM4Q9Y4Z0 139 aaKnown RBP8.37□□□□□ -1.07
CPSF7-212ENST00000489728 H3BP45 60 aa8.36□□□□□ -1.07
CPSF7-212ENST00000489728 K7EPK0 472 aa8.36□□□□□ -1.07
CPSF7-212ENST00000489728 L7N2F9 121 aa8.36□□□□□ -1.07
CPSF7-212ENST00000489728 CFDP00746 253 aaPredicted RBP8.36□□□□□ -1.07
CPSF7-212ENST00000489728 NUP62P37198 522 aaPredicted RBP8.36□□□□□ -1.07
CPSF7-212ENST00000489728 VAMP2P63027 116 aa8.36□□□□□ -1.07
CPSF7-212ENST00000489728 DLK1P80370 383 aa8.36□□□□□ -1.07
CPSF7-212ENST00000489728 RGS21Q2M5E4 152 aa8.36□□□□□ -1.07
CPSF7-212ENST00000489728 TIGITQ495A1 244 aa8.36□□□□□ -1.07
CPSF7-212ENST00000489728 LAMTOR1Q6IAA8 161 aa8.36□□□□□ -1.07
CPSF7-212ENST00000489728 BTNL8Q6UX41 500 aa8.36□□□□□ -1.07
CPSF7-212ENST00000489728 HAPLN4Q86UW8 402 aa8.36□□□□□ -1.07
CPSF7-212ENST00000489728 TMEM61Q8N0U2 210 aa8.36□□□□□ -1.07
CPSF7-212ENST00000489728 THAP8Q8NA92 274 aa8.36□□□□□ -1.07
CPSF7-212ENST00000489728 NARS2Q96I59 477 aaKnown RBP8.36□□□□□ -1.07
CPSF7-212ENST00000489728 METTL26Q96S19 204 aa8.36□□□□□ -1.07
CPSF7-212ENST00000489728 TRGV9Q99603 122 aa8.36□□□□□ -1.07
CPSF7-212ENST00000489728 SPAG8Q99932 426 aaPredicted RBP8.36□□□□□ -1.07
CPSF7-212ENST00000489728 GGACTQ9BVM4 153 aa8.36□□□□□ -1.07
CPSF7-212ENST00000489728 PAIP2BQ9ULR5 123 aaKnown RBP8.36□□□□□ -1.07
CPSF7-212ENST00000489728 A0A1W2PS18 150 aa8.35□□□□□ -1.07
CPSF7-212ENST00000489728 ZFP92A6NM28 416 aa8.35□□□□□ -1.07
CPSF7-212ENST00000489728 PMS2P5A8MQ11 134 aa8.35□□□□□ -1.07
CPSF7-212ENST00000489728 A8MZ25 164 aa8.35□□□□□ -1.07
CPSF7-212ENST00000489728 GOSR2O14653 212 aa8.35□□□□□ -1.07
CPSF7-212ENST00000489728 CHEK1O14757 476 aa8.35□□□□□ -1.07
CPSF7-212ENST00000489728 TSPAN4O14817 238 aa8.35□□□□□ -1.07
CPSF7-212ENST00000489728 SSNA1O43805 119 aa8.35□□□□□ -1.07
CPSF7-212ENST00000489728 RD3LP0DJH9 198 aa8.35□□□□□ -1.07
CPSF7-212ENST00000489728 NPPCP23582 126 aa8.35□□□□□ -1.07
CPSF7-212ENST00000489728 CRYBB3P26998 211 aa8.35□□□□□ -1.07
CPSF7-212ENST00000489728 RBPMS2Q6ZRY4 209 aaKnown RBP8.35□□□□□ -1.07
CPSF7-212ENST00000489728 ACOT7LQ6ZUV0 252 aa8.35□□□□□ -1.07
CPSF7-212ENST00000489728 OR10P1Q8NGE3 313 aa8.35□□□□□ -1.07
CPSF7-212ENST00000489728 OR51G1Q8NGK1 321 aa8.35□□□□□ -1.07
CPSF7-212ENST00000489728 RHPN1-AS1Q9BWJ2 59 aa8.35□□□□□ -1.07
CPSF7-212ENST00000489728 C11orf1Q9H5F2 150 aa8.35□□□□□ -1.07
CPSF7-212ENST00000489728 VSIRQ9H7M9 311 aa8.35□□□□□ -1.07
CPSF7-212ENST00000489728 PFDN2Q9UHV9 154 aa8.35□□□□□ -1.07
CPSF7-212ENST00000489728 SMAD5-AS1Q9Y6J3 95 aa8.35□□□□□ -1.07
CPSF7-212ENST00000489728 IZUMO1RA6ND01 250 aa8.34□□□□□ -1.07
CPSF7-212ENST00000489728 ZNF785A8K8V0 405 aa8.34□□□□□ -1.07
CPSF7-212ENST00000489728 RLN2P04090 185 aa8.34□□□□□ -1.07
CPSF7-212ENST00000489728 PET100P0DJ07 73 aa8.34□□□□□ -1.07
CPSF7-212ENST00000489728 EDN2P20800 178 aa8.34□□□□□ -1.07
CPSF7-212ENST00000489728 S100A10P60903 97 aa8.34□□□□□ -1.07
CPSF7-212ENST00000489728 RAB32Q13637 225 aa8.34□□□□□ -1.07
CPSF7-212ENST00000489728 OR8G2PQ6IF36 304 aa8.34□□□□□ -1.07
CPSF7-212ENST00000489728 TMEM144Q7Z5S9 345 aa8.34□□□□□ -1.07
CPSF7-212ENST00000489728 GRAMD2BQ96HH9 432 aa8.34□□□□□ -1.07
CPSF7-212ENST00000489728 B9D2Q9BPU9 175 aa8.34□□□□□ -1.07
CPSF7-212ENST00000489728 FAM110AQ9BQ89 295 aa8.34□□□□□ -1.07
CPSF7-212ENST00000489728 LYRM2Q9NU23 88 aaPredicted RBP8.34□□□□□ -1.07
CPSF7-212ENST00000489728 MGAT4CQ9UBM8 478 aa8.34□□□□□ -1.07
CPSF7-212ENST00000489728 LSM5Q9Y4Y9 91 aaKnown RBP8.34□□□□□ -1.07
CPSF7-212ENST00000489728 PRKDCP78527 4128 aaKnown RBP8.34□□□□□ -1.07
CPSF7-212ENST00000489728 IGKV1D-37A0A075B6S9 117 aa8.33□□□□□ -1.08
CPSF7-212ENST00000489728 IGHV3OR16-8A0A075B7F1 116 aa8.33□□□□□ -1.08
CPSF7-212ENST00000489728 TRAV2A0A0B4J234 112 aa8.33□□□□□ -1.08
CPSF7-212ENST00000489728 OR4C46A6NHA9 309 aa8.33□□□□□ -1.08
CPSF7-212ENST00000489728 DEDDO75618 318 aa8.33□□□□□ -1.08
CPSF7-212ENST00000489728 IL4P05112 153 aa8.33□□□□□ -1.08
CPSF7-212ENST00000489728 METTL15P1P0C7V9 234 aa8.33□□□□□ -1.08
CPSF7-212ENST00000489728 PSG1P11464 419 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms