RNA–Protein interactions for RNA: ENST00000489581.1

TOP3B-217, Transcript of DNA topoisomerase III beta, humanhuman

TSL 2

Gene TOP3B, Length 789 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-217ENST00000489581 AP2S1P53680 142 aaPredicted RBP12.13□□□□□ -0.47
TOP3B-217ENST00000489581 SNRPD3P62318 126 aaKnown RBP12.13□□□□□ -0.47
TOP3B-217ENST00000489581 TRIM16LQ309B1 348 aa12.13□□□□□ -0.47
TOP3B-217ENST00000489581 SP6Q3SY56 376 aa12.13□□□□□ -0.47
TOP3B-217ENST00000489581 Q8WTZ3 238 aa12.13□□□□□ -0.47
TOP3B-217ENST00000489581 SCPEP1Q9HB40 452 aa12.13□□□□□ -0.47
TOP3B-217ENST00000489581 COMMD3Q9UBI1 195 aa12.13□□□□□ -0.47
TOP3B-217ENST00000489581 C3orf85A0A1B0GTC6 90 aa12.12□□□□□ -0.47
TOP3B-217ENST00000489581 ATG12O94817 140 aa12.12□□□□□ -0.47
TOP3B-217ENST00000489581 IGLC1P0CG04 106 aa12.12□□□□□ -0.47
TOP3B-217ENST00000489581 SPART-AS1P0CW21 52 aa12.12□□□□□ -0.47
TOP3B-217ENST00000489581 RND2P52198 227 aa12.12□□□□□ -0.47
TOP3B-217ENST00000489581 DHODHQ02127 395 aa12.12□□□□□ -0.47
TOP3B-217ENST00000489581 BSXQ3C1V8 233 aa12.12□□□□□ -0.47
TOP3B-217ENST00000489581 Q6ZR54 194 aa12.12□□□□□ -0.47
TOP3B-217ENST00000489581 OR1S2Q8NGQ3 325 aa12.12□□□□□ -0.47
TOP3B-217ENST00000489581 ZNF486Q96H40 463 aaPredicted RBP12.12□□□□□ -0.47
TOP3B-217ENST00000489581 ABCA13Q86UQ4 5058 aa12.12□□□□□ -0.47
TOP3B-217ENST00000489581 IGHV3OR16-12A0A075B7B8 117 aa12.11□□□□□ -0.47
TOP3B-217ENST00000489581 RPS10-NUDT3A0A1W2PQS6 291 aa12.11□□□□□ -0.47
TOP3B-217ENST00000489581 OR10J1P30954 320 aa12.11□□□□□ -0.47
TOP3B-217ENST00000489581 FXYD7P58549 80 aa12.11□□□□□ -0.47
TOP3B-217ENST00000489581 USF2Q15853 346 aaPredicted RBP12.11□□□□□ -0.47
TOP3B-217ENST00000489581 RNASE12Q5GAN4 147 aaKnown RBP12.11□□□□□ -0.47
TOP3B-217ENST00000489581 PRSS54Q6PEW0 395 aa12.11□□□□□ -0.47
TOP3B-217ENST00000489581 Q6ZRM9 215 aa12.11□□□□□ -0.47
TOP3B-217ENST00000489581 RNASE11Q8TAA1 199 aaKnown RBP12.11□□□□□ -0.47
TOP3B-217ENST00000489581 RRNAD1Q96FB5 475 aaKnown RBP12.11□□□□□ -0.47
TOP3B-217ENST00000489581 NRN1Q9NPD7 142 aa12.11□□□□□ -0.47
TOP3B-217ENST00000489581 IGKV3-20P01619 116 aa12.1□□□□□ -0.47
TOP3B-217ENST00000489581 CD74P04233 296 aa12.1□□□□□ -0.47
TOP3B-217ENST00000489581 IL4P05112 153 aa12.1□□□□□ -0.47
TOP3B-217ENST00000489581 HLA-DRB4P13762 266 aa12.1□□□□□ -0.47
TOP3B-217ENST00000489581 DEFB1P60022 68 aa12.1□□□□□ -0.47
TOP3B-217ENST00000489581 YPEL3P61236 119 aaPredicted RBP12.1□□□□□ -0.47
TOP3B-217ENST00000489581 ZNF705AQ6ZN79 300 aaPredicted RBP12.1□□□□□ -0.47
TOP3B-217ENST00000489581 NEU1Q99519 415 aa12.1□□□□□ -0.47
TOP3B-217ENST00000489581 PLA2G2EQ9NZK7 142 aa12.1□□□□□ -0.47
TOP3B-217ENST00000489581 HLA-DRB4X5D2U9 266 aa12.1□□□□□ -0.47
TOP3B-217ENST00000489581 ZNF705FA8MVS1 300 aaPredicted RBP12.09□□□□□ -0.47
TOP3B-217ENST00000489581 APOA1P02647 267 aa12.09□□□□□ -0.47
TOP3B-217ENST00000489581 ZNF705DP0CH99 300 aaPredicted RBP12.09□□□□□ -0.47
TOP3B-217ENST00000489581 ZNF705BP0CI00 300 aaPredicted RBP12.09□□□□□ -0.47
TOP3B-217ENST00000489581 HTR2BP41595 481 aa12.09□□□□□ -0.47
TOP3B-217ENST00000489581 SPCS3P61009 180 aa12.09□□□□□ -0.47
TOP3B-217ENST00000489581 GDF5OSQ5U4N7 250 aa12.09□□□□□ -0.47
TOP3B-217ENST00000489581 SIGLEC15Q6ZMC9 328 aa12.09□□□□□ -0.47
TOP3B-217ENST00000489581 LHFPL1Q86WI0 220 aa12.09□□□□□ -0.47
TOP3B-217ENST00000489581 SEPSECSQ9HD40 501 aaKnown RBP12.09□□□□□ -0.47
TOP3B-217ENST00000489581 HEYLQ9NQ87 328 aaPredicted RBP12.09□□□□□ -0.47
TOP3B-217ENST00000489581 COPZ2Q9P299 210 aa12.09□□□□□ -0.47
TOP3B-217ENST00000489581 KLK11Q9UBX7 282 aa12.09□□□□□ -0.47
TOP3B-217ENST00000489581 TMEM189A5PLL7 270 aa12.08□□□□□ -0.48
TOP3B-217ENST00000489581 SMIM9A6NGZ8 99 aa12.08□□□□□ -0.48
TOP3B-217ENST00000489581 BUB3O43684 328 aa12.08□□□□□ -0.48
TOP3B-217ENST00000489581 ATP6V1G2O95670 118 aa12.08□□□□□ -0.48
TOP3B-217ENST00000489581 SLC25A4P12235 298 aa12.08□□□□□ -0.48
TOP3B-217ENST00000489581 HTN3P15516 51 aa12.08□□□□□ -0.48
TOP3B-217ENST00000489581 ELK1P19419 428 aa12.08□□□□□ -0.48
TOP3B-217ENST00000489581 UCP1P25874 307 aa12.08□□□□□ -0.48
TOP3B-217ENST00000489581 C2orf83Q53S99 150 aa12.08□□□□□ -0.48
TOP3B-217ENST00000489581 RNASE10Q5GAN6 216 aaKnown RBP12.08□□□□□ -0.48
TOP3B-217ENST00000489581 SOHLH1Q5JUK2 328 aa12.08□□□□□ -0.48
TOP3B-217ENST00000489581 FAM222AQ5U5X8 452 aa12.08□□□□□ -0.48
TOP3B-217ENST00000489581 NPIPB3Q92617 1050 aa12.08□□□□□ -0.48
TOP3B-217ENST00000489581 YIPF6Q96EC8 236 aa12.08□□□□□ -0.48
TOP3B-217ENST00000489581 FAM210BQ96KR6 192 aa12.08□□□□□ -0.48
TOP3B-217ENST00000489581 DKK2Q9UBU2 259 aa12.08□□□□□ -0.48
TOP3B-217ENST00000489581 HPGDSO60760 199 aa12.07□□□□□ -0.48
TOP3B-217ENST00000489581 NXPH3O95157 252 aa12.07□□□□□ -0.48
TOP3B-217ENST00000489581 CD3DP04234 171 aa12.07□□□□□ -0.48
TOP3B-217ENST00000489581 NKX2-1P43699 371 aaPredicted RBP12.07□□□□□ -0.48
TOP3B-217ENST00000489581 C1orf134Q5TEV5 83 aa12.07□□□□□ -0.48
TOP3B-217ENST00000489581 NIPSNAP3BQ9BS92 247 aa12.07□□□□□ -0.48
TOP3B-217ENST00000489581 CTNNBIP1Q9NSA3 81 aaPredicted RBP12.07□□□□□ -0.48
TOP3B-217ENST00000489581 RFNGQ9Y644 331 aa12.07□□□□□ -0.48
TOP3B-217ENST00000489581 HSPG2P98160 4391 aa12.07□□□□□ -0.48
TOP3B-217ENST00000489581 GSTZ1O43708 216 aaPredicted RBP12.06□□□□□ -0.48
TOP3B-217ENST00000489581 RD3LP0DJH9 198 aa12.06□□□□□ -0.48
TOP3B-217ENST00000489581 ARRDC1Q8N5I2 433 aa12.06□□□□□ -0.48
TOP3B-217ENST00000489581 CCDC71LQ8N9Z2 235 aa12.06□□□□□ -0.48
TOP3B-217ENST00000489581 OR52E5Q8NH55 327 aa12.06□□□□□ -0.48
TOP3B-217ENST00000489581 ZFAND1Q8TCF1 268 aa12.06□□□□□ -0.48
TOP3B-217ENST00000489581 RNASEH2CQ8TDP1 164 aaKnown RBP12.06□□□□□ -0.48
TOP3B-217ENST00000489581 ACY3Q96HD9 319 aa12.06□□□□□ -0.48
TOP3B-217ENST00000489581 CEBPZOSA8MTT3 80 aa12.05□□□□□ -0.48
TOP3B-217ENST00000489581 TOMM40O96008 361 aa12.05□□□□□ -0.48
TOP3B-217ENST00000489581 RNF212Q495C1 297 aa12.05□□□□□ -0.48
TOP3B-217ENST00000489581 AARDQ4LEZ3 155 aa12.05□□□□□ -0.48
TOP3B-217ENST00000489581 SLC24A4Q8NFF2 622 aa12.05□□□□□ -0.48
TOP3B-217ENST00000489581 OR4B1Q8NGF8 309 aa12.05□□□□□ -0.48
TOP3B-217ENST00000489581 OR4D10Q8NGI6 311 aa12.05□□□□□ -0.48
TOP3B-217ENST00000489581 OR51G1Q8NGK1 321 aa12.05□□□□□ -0.48
TOP3B-217ENST00000489581 OR13C8Q8NGS7 320 aa12.05□□□□□ -0.48
TOP3B-217ENST00000489581 TERB2Q8NHR7 220 aa12.05□□□□□ -0.48
TOP3B-217ENST00000489581 MARCH1Q8TCQ1 289 aa12.05□□□□□ -0.48
TOP3B-217ENST00000489581 TMEM170AQ8WVE7 144 aa12.05□□□□□ -0.48
TOP3B-217ENST00000489581 LINC00052Q96N35 136 aa12.05□□□□□ -0.48
TOP3B-217ENST00000489581 TEX48A0A1B0GUV7 120 aa12.04□□□□□ -0.48
TOP3B-217ENST00000489581 FAM25AB3EWG3 89 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms