RNA–Protein interactions for RNA: ENST00000489554.1

SCAMP4-208, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 3

Gene SCAMP4, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-208ENST00000489554 SLC25A24Q6NUK1 477 aa8.16□□□□□ -1.1
SCAMP4-208ENST00000489554 UNQ5815/PRO19632Q6UWF5 114 aa8.16□□□□□ -1.1
SCAMP4-208ENST00000489554 DPPA3Q6W0C5 159 aa8.16□□□□□ -1.1
SCAMP4-208ENST00000489554 ZNF114Q8NC26 417 aa8.16□□□□□ -1.1
SCAMP4-208ENST00000489554 LFNGQ8NES3 379 aa8.16□□□□□ -1.1
SCAMP4-208ENST00000489554 OR1N2Q8NGR9 330 aa8.16□□□□□ -1.1
SCAMP4-208ENST00000489554 TMED6Q8WW62 240 aa8.16□□□□□ -1.1
SCAMP4-208ENST00000489554 PINX1Q96BK5 328 aaKnown RBP8.16□□□□□ -1.1
SCAMP4-208ENST00000489554 ATP5SQ99766 215 aa8.16□□□□□ -1.1
SCAMP4-208ENST00000489554 HINT2Q9BX68 163 aa8.16□□□□□ -1.1
SCAMP4-208ENST00000489554 PARD6GQ9BYG4 376 aaPredicted RBP8.16□□□□□ -1.1
SCAMP4-208ENST00000489554 PLEKHA3Q9HB20 300 aa8.16□□□□□ -1.1
SCAMP4-208ENST00000489554 WI2-2373I1.2A0A1W2PRP0 233 aa8.15□□□□□ -1.1
SCAMP4-208ENST00000489554 IGSF23A1L1A6 192 aa8.15□□□□□ -1.1
SCAMP4-208ENST00000489554 NPIPB5A8MRT5 1133 aa8.15□□□□□ -1.1
SCAMP4-208ENST00000489554 SEC14L6B5MCN3 397 aa8.15□□□□□ -1.1
SCAMP4-208ENST00000489554 PRSS46E5RG02 174 aa8.15□□□□□ -1.1
SCAMP4-208ENST00000489554 ACTL6BO94805 426 aa8.15□□□□□ -1.1
SCAMP4-208ENST00000489554 OR13C7P0DN81 318 aa8.15□□□□□ -1.1
SCAMP4-208ENST00000489554 SPP1P10451 314 aa8.15□□□□□ -1.1
SCAMP4-208ENST00000489554 ZP3P21754 424 aa8.15□□□□□ -1.1
SCAMP4-208ENST00000489554 HOXA1P49639 335 aaPredicted RBP8.15□□□□□ -1.1
SCAMP4-208ENST00000489554 NHLH2Q02577 135 aa8.15□□□□□ -1.1
SCAMP4-208ENST00000489554 TMEM14EPQ6UXP3 125 aa8.15□□□□□ -1.1
SCAMP4-208ENST00000489554 HAPLN4Q86UW8 402 aa8.15□□□□□ -1.1
SCAMP4-208ENST00000489554 CCDC28AQ8IWP9 274 aa8.15□□□□□ -1.1
SCAMP4-208ENST00000489554 TTC9CQ8N5M4 171 aa8.15□□□□□ -1.1
SCAMP4-208ENST00000489554 OR5C1Q8NGR4 320 aa8.15□□□□□ -1.1
SCAMP4-208ENST00000489554 TMEM68Q96MH6 324 aa8.15□□□□□ -1.1
SCAMP4-208ENST00000489554 OR5B12Q96R08 314 aa8.15□□□□□ -1.1
SCAMP4-208ENST00000489554 SMIM3Q9BZL3 60 aa8.15□□□□□ -1.1
SCAMP4-208ENST00000489554 HIPK2Q9H2X6 1198 aa8.15□□□□□ -1.1
SCAMP4-208ENST00000489554 H3BP45 60 aa8.14□□□□□ -1.11
SCAMP4-208ENST00000489554 H3BUA1 57 aa8.14□□□□□ -1.11
SCAMP4-208ENST00000489554 PRH1P02810 166 aa8.14□□□□□ -1.11
SCAMP4-208ENST00000489554 LGALS1P09382 135 aaKnown RBP8.14□□□□□ -1.11
SCAMP4-208ENST00000489554 INSL3P51460 131 aa8.14□□□□□ -1.11
SCAMP4-208ENST00000489554 ARL16Q0P5N6 197 aa8.14□□□□□ -1.11
SCAMP4-208ENST00000489554 C2orf83Q53S99 150 aa8.14□□□□□ -1.11
SCAMP4-208ENST00000489554 DEFB121Q5J5C9 76 aa8.14□□□□□ -1.11
SCAMP4-208ENST00000489554 BSCL2Q96G97 398 aaPredicted RBP8.14□□□□□ -1.11
SCAMP4-208ENST00000489554 FANCD2OSQ96PS1 177 aa8.14□□□□□ -1.11
SCAMP4-208ENST00000489554 HEYLQ9NQ87 328 aaPredicted RBP8.14□□□□□ -1.11
SCAMP4-208ENST00000489554 F11RQ9Y624 299 aaKnown RBP8.14□□□□□ -1.11
SCAMP4-208ENST00000489554 IGLV11-55A0A075B6I3 123 aa8.13□□□□□ -1.11
SCAMP4-208ENST00000489554 LINC01619G3V211 115 aa8.13□□□□□ -1.11
SCAMP4-208ENST00000489554 HBE1P02100 147 aa8.13□□□□□ -1.11
SCAMP4-208ENST00000489554 CAMLGP49069 296 aa8.13□□□□□ -1.11
SCAMP4-208ENST00000489554 TPPP2P59282 170 aa8.13□□□□□ -1.11
SCAMP4-208ENST00000489554 RAB11AP62491 216 aa8.13□□□□□ -1.11
SCAMP4-208ENST00000489554 SERF2P84101 59 aa8.13□□□□□ -1.11
SCAMP4-208ENST00000489554 TOR2AQ5JU69 321 aa8.13□□□□□ -1.11
SCAMP4-208ENST00000489554 FAM74A1Q5RGS3 127 aa8.13□□□□□ -1.11
SCAMP4-208ENST00000489554 LILRB2Q8N423 598 aa8.13□□□□□ -1.11
SCAMP4-208ENST00000489554 SLC24A4Q8NFF2 622 aa8.13□□□□□ -1.11
SCAMP4-208ENST00000489554 OR10P1Q8NGE3 313 aa8.13□□□□□ -1.11
SCAMP4-208ENST00000489554 CXorf58Q96LI9 332 aa8.13□□□□□ -1.11
SCAMP4-208ENST00000489554 PBDC1Q9BVG4 233 aa8.13□□□□□ -1.11
SCAMP4-208ENST00000489554 GGACTQ9BVM4 153 aa8.13□□□□□ -1.11
SCAMP4-208ENST00000489554 SMDT1Q9H4I9 107 aa8.13□□□□□ -1.11
SCAMP4-208ENST00000489554 ENY2Q9NPA8 101 aa8.13□□□□□ -1.11
SCAMP4-208ENST00000489554 TRBV9A0A0B4J1U6 114 aa8.12□□□□□ -1.11
SCAMP4-208ENST00000489554 OVOL1O14753 267 aa8.12□□□□□ -1.11
SCAMP4-208ENST00000489554 BRI3O95415 125 aa8.12□□□□□ -1.11
SCAMP4-208ENST00000489554 MBP02144 154 aa8.12□□□□□ -1.11
SCAMP4-208ENST00000489554 TRGV3P03979 118 aa8.12□□□□□ -1.11
SCAMP4-208ENST00000489554 HSPB1P04792 205 aaKnown RBP8.12□□□□□ -1.11
SCAMP4-208ENST00000489554 NPY1RP25929 384 aa8.12□□□□□ -1.11
SCAMP4-208ENST00000489554 DEFA5Q01523 94 aa8.12□□□□□ -1.11
SCAMP4-208ENST00000489554 SPANXN5Q5MJ07 72 aa8.12□□□□□ -1.11
SCAMP4-208ENST00000489554 AKR1C8PQ5T2L2 129 aa8.12□□□□□ -1.11
SCAMP4-208ENST00000489554 PXDC1Q5TGL8 231 aa8.12□□□□□ -1.11
SCAMP4-208ENST00000489554 OR5T1Q8NG75 326 aa8.12□□□□□ -1.11
SCAMP4-208ENST00000489554 OR2G3Q8NGZ4 309 aa8.12□□□□□ -1.11
SCAMP4-208ENST00000489554 OR1P1Q8NH06 330 aa8.12□□□□□ -1.11
SCAMP4-208ENST00000489554 MS4A10Q96PG2 267 aa8.12□□□□□ -1.11
SCAMP4-208ENST00000489554 PSMG3Q9BT73 122 aaPredicted RBP8.12□□□□□ -1.11
SCAMP4-208ENST00000489554 FNDC4Q9H6D8 234 aaPredicted RBP8.12□□□□□ -1.11
SCAMP4-208ENST00000489554 ZNF355PQ9NSJ1 428 aa8.12□□□□□ -1.11
SCAMP4-208ENST00000489554 TIMM9Q9Y5J7 89 aa8.12□□□□□ -1.11
SCAMP4-208ENST00000489554 IGHV4OR15-8A0A075B7B6 117 aa8.11□□□□□ -1.11
SCAMP4-208ENST00000489554 A0A087WW49 117 aa8.11□□□□□ -1.11
SCAMP4-208ENST00000489554 A0A0G2JLM5 398 aa8.11□□□□□ -1.11
SCAMP4-208ENST00000489554 C17orf112F2Z3M2 114 aa8.11□□□□□ -1.11
SCAMP4-208ENST00000489554 I3L2K1 104 aa8.11□□□□□ -1.11
SCAMP4-208ENST00000489554 K7EIM0 57 aa8.11□□□□□ -1.11
SCAMP4-208ENST00000489554 CST7O76096 145 aa8.11□□□□□ -1.11
SCAMP4-208ENST00000489554 IGHV3-11P01762 117 aa8.11□□□□□ -1.11
SCAMP4-208ENST00000489554 METTL15P1P0C7V9 234 aa8.11□□□□□ -1.11
SCAMP4-208ENST00000489554 ERHP84090 104 aaKnown RBP8.11□□□□□ -1.11
SCAMP4-208ENST00000489554 CLINT1Q14677 625 aa8.11□□□□□ -1.11
SCAMP4-208ENST00000489554 PEA15Q15121 130 aa8.11□□□□□ -1.11
SCAMP4-208ENST00000489554 MLANAQ16655 118 aa8.11□□□□□ -1.11
SCAMP4-208ENST00000489554 TMEM217Q8N7C4 229 aa8.11□□□□□ -1.11
SCAMP4-208ENST00000489554 HSD17B11Q8NBQ5 300 aa8.11□□□□□ -1.11
SCAMP4-208ENST00000489554 LYPD6BQ8NI32 183 aa8.11□□□□□ -1.11
SCAMP4-208ENST00000489554 PCNPQ8WW12 178 aaKnown RBP8.11□□□□□ -1.11
SCAMP4-208ENST00000489554 DLX4Q92988 240 aaPredicted RBP8.11□□□□□ -1.11
SCAMP4-208ENST00000489554 TMEM147Q9BVK8 224 aa8.11□□□□□ -1.11
SCAMP4-208ENST00000489554 WFDC1Q9HC57 220 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms