RNA–Protein interactions for RNA: ENST00000489357.5

VTI1A-207, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 3

Gene VTI1A, Length 444 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-207ENST00000489357 C8orf88P0DMB2 117 aa6.78□□□□□ -1.32
VTI1A-207ENST00000489357 PRTN3P24158 256 aa6.78□□□□□ -1.32
VTI1A-207ENST00000489357 HTR1DP28221 377 aa6.78□□□□□ -1.32
VTI1A-207ENST00000489357 RPL27AP46776 148 aaKnown RBP6.78□□□□□ -1.32
VTI1A-207ENST00000489357 RPS10P46783 165 aaKnown RBP6.78□□□□□ -1.32
VTI1A-207ENST00000489357 FAM3BP58499 235 aaPredicted RBP6.78□□□□□ -1.32
VTI1A-207ENST00000489357 WT1-ASQ06250 92 aa6.78□□□□□ -1.32
VTI1A-207ENST00000489357 PSG5Q15238 335 aa6.78□□□□□ -1.32
VTI1A-207ENST00000489357 ADIRFQ15847 76 aa6.78□□□□□ -1.32
VTI1A-207ENST00000489357 DEFB113Q30KQ7 82 aa6.78□□□□□ -1.32
VTI1A-207ENST00000489357 XP32Q5T750 250 aa6.78□□□□□ -1.32
VTI1A-207ENST00000489357 MINOS1Q5TGZ0 78 aa6.78□□□□□ -1.32
VTI1A-207ENST00000489357 FAM78BQ5VT40 261 aa6.78□□□□□ -1.32
VTI1A-207ENST00000489357 CST9LP1Q5W188 147 aa6.78□□□□□ -1.32
VTI1A-207ENST00000489357 LINC01551Q86U37 167 aa6.78□□□□□ -1.32
VTI1A-207ENST00000489357 PPP1R27Q86WC6 154 aa6.78□□□□□ -1.32
VTI1A-207ENST00000489357 TMEM116Q8NCL8 245 aa6.78□□□□□ -1.32
VTI1A-207ENST00000489357 OR51G1Q8NGK1 321 aa6.78□□□□□ -1.32
VTI1A-207ENST00000489357 SSMEM1Q8WWF3 244 aa6.78□□□□□ -1.32
VTI1A-207ENST00000489357 SSBP3Q9BWW4 388 aaPredicted RBP6.78□□□□□ -1.32
VTI1A-207ENST00000489357 SRD5A3Q9H8P0 318 aa6.78□□□□□ -1.32
VTI1A-207ENST00000489357 SEPSECSQ9HD40 501 aaKnown RBP6.78□□□□□ -1.32
VTI1A-207ENST00000489357 AP5S1Q9NUS5 200 aa6.78□□□□□ -1.32
VTI1A-207ENST00000489357 MINOS1-NBL1R4GNA1 71 aa6.78□□□□□ -1.32
VTI1A-207ENST00000489357 FLNAP21333 2647 aaKnown RBP6.78□□□□□ -1.32
VTI1A-207ENST00000489357 DOCK11Q5JSL3 2073 aa6.77□□□□□ -1.33
VTI1A-207ENST00000489357 ABCA1O95477 2261 aa6.77□□□□□ -1.33
VTI1A-207ENST00000489357 IGLC7A0M8Q6 106 aa6.77□□□□□ -1.33
VTI1A-207ENST00000489357 PSMB11A5LHX3 300 aa6.77□□□□□ -1.33
VTI1A-207ENST00000489357 CGB1A6NKQ9 187 aa6.77□□□□□ -1.33
VTI1A-207ENST00000489357 GGCTO75223 188 aaKnown RBP6.77□□□□□ -1.33
VTI1A-207ENST00000489357 FABP1P07148 127 aa6.77□□□□□ -1.33
VTI1A-207ENST00000489357 OR10J1P30954 320 aa6.77□□□□□ -1.33
VTI1A-207ENST00000489357 REG1BP48304 166 aa6.77□□□□□ -1.33
VTI1A-207ENST00000489357 PLP1P60201 277 aa6.77□□□□□ -1.33
VTI1A-207ENST00000489357 RPL19P84098 196 aaKnown RBP6.77□□□□□ -1.33
VTI1A-207ENST00000489357 FOXL1Q12952 345 aa6.77□□□□□ -1.33
VTI1A-207ENST00000489357 ZNF674Q2M3X9 581 aa6.77□□□□□ -1.33
VTI1A-207ENST00000489357 GCSAMLQ5JQS6 135 aa6.77□□□□□ -1.33
VTI1A-207ENST00000489357 TPTE2P1Q5T6R2 138 aa6.77□□□□□ -1.33
VTI1A-207ENST00000489357 TRGV9Q99603 122 aa6.77□□□□□ -1.33
VTI1A-207ENST00000489357 SLC25A33Q9BSK2 321 aa6.77□□□□□ -1.33
VTI1A-207ENST00000489357 UBTD1Q9HAC8 227 aa6.77□□□□□ -1.33
VTI1A-207ENST00000489357 DNAJC4Q9NNZ3 241 aa6.77□□□□□ -1.33
VTI1A-207ENST00000489357 ZNRD1Q9P1U0 126 aa6.77□□□□□ -1.33
VTI1A-207ENST00000489357 DPM3Q9P2X0 92 aa6.77□□□□□ -1.33
VTI1A-207ENST00000489357 CR1P17927 2039 aa6.77□□□□□ -1.33
VTI1A-207ENST00000489357 CELSR1Q9NYQ6 3014 aa6.76□□□□□ -1.33
VTI1A-207ENST00000489357 TLN2Q9Y4G6 2542 aa6.76□□□□□ -1.33
VTI1A-207ENST00000489357 LOC105371242A0A075B767 164 aa6.76□□□□□ -1.33
VTI1A-207ENST00000489357 IGKV1OR2-108A0A075B7D4 117 aa6.76□□□□□ -1.33
VTI1A-207ENST00000489357 A0A1W2PPI3 338 aa6.76□□□□□ -1.33
VTI1A-207ENST00000489357 ODF3BA8MYP8 253 aa6.76□□□□□ -1.33
VTI1A-207ENST00000489357 PPP5D1E7EU14 171 aa6.76□□□□□ -1.33
VTI1A-207ENST00000489357 ENSAO43768 121 aaKnown RBP6.76□□□□□ -1.33
VTI1A-207ENST00000489357 NDUFA3O95167 84 aa6.76□□□□□ -1.33
VTI1A-207ENST00000489357 NDUFB4O95168 129 aa6.76□□□□□ -1.33
VTI1A-207ENST00000489357 S100A9P06702 114 aaKnown RBP6.76□□□□□ -1.33
VTI1A-207ENST00000489357 CXCL1P09341 107 aa6.76□□□□□ -1.33
VTI1A-207ENST00000489357 GALR1P47211 349 aa6.76□□□□□ -1.33
VTI1A-207ENST00000489357 ATP5G3P48201 142 aa6.76□□□□□ -1.33
VTI1A-207ENST00000489357 SNRPEP62304 92 aaKnown RBP6.76□□□□□ -1.33
VTI1A-207ENST00000489357 GNB1P62873 340 aa6.76□□□□□ -1.33
VTI1A-207ENST00000489357 S100A12P80511 92 aa6.76□□□□□ -1.33
VTI1A-207ENST00000489357 KIAA0141Q14154 515 aaPredicted RBP6.76□□□□□ -1.33
VTI1A-207ENST00000489357 MRGPRG-AS1Q2M3A8 158 aa6.76□□□□□ -1.33
VTI1A-207ENST00000489357 C16orf82Q7Z2V1 217 aa6.76□□□□□ -1.33
VTI1A-207ENST00000489357 S100A7AQ86SG5 101 aa6.76□□□□□ -1.33
VTI1A-207ENST00000489357 MOB3BQ86TA1 216 aa6.76□□□□□ -1.33
VTI1A-207ENST00000489357 NPBQ8NG41 125 aa6.76□□□□□ -1.33
VTI1A-207ENST00000489357 OR10W1Q8NGF6 305 aa6.76□□□□□ -1.33
VTI1A-207ENST00000489357 C2CD4CQ8TF44 421 aa6.76□□□□□ -1.33
VTI1A-207ENST00000489357 SMIM12Q96EX1 92 aa6.76□□□□□ -1.33
VTI1A-207ENST00000489357 CCL19Q99731 98 aa6.76□□□□□ -1.33
VTI1A-207ENST00000489357 RNF24Q9Y225 148 aa6.76□□□□□ -1.33
VTI1A-207ENST00000489357 F11RQ9Y624 299 aaKnown RBP6.76□□□□□ -1.33
VTI1A-207ENST00000489357 ZANQ9Y493 2812 aa6.76□□□□□ -1.33
VTI1A-207ENST00000489357 MDFIC2A0A1B0GVS7 189 aa6.75□□□□□ -1.33
VTI1A-207ENST00000489357 COX7A2P2O60397 106 aa6.75□□□□□ -1.33
VTI1A-207ENST00000489357 OR10J4P0C629 311 aa6.75□□□□□ -1.33
VTI1A-207ENST00000489357 MYOD1P15172 320 aa6.75□□□□□ -1.33
VTI1A-207ENST00000489357 HOXA5P20719 270 aa6.75□□□□□ -1.33
VTI1A-207ENST00000489357 NPPCP23582 126 aa6.75□□□□□ -1.33
VTI1A-207ENST00000489357 EFNA4P52798 201 aa6.75□□□□□ -1.33
VTI1A-207ENST00000489357 FABP9Q0Z7S8 132 aa6.75□□□□□ -1.33
VTI1A-207ENST00000489357 DIAPH2-AS1Q14236 149 aa6.75□□□□□ -1.33
VTI1A-207ENST00000489357 TNXAQ16473 311 aa6.75□□□□□ -1.33
VTI1A-207ENST00000489357 COX19Q49B96 90 aa6.75□□□□□ -1.33
VTI1A-207ENST00000489357 C10orf113Q5VZT2 155 aa6.75□□□□□ -1.33
VTI1A-207ENST00000489357 ZFP82Q8N141 532 aa6.75□□□□□ -1.33
VTI1A-207ENST00000489357 OR2T10Q8NGZ9 312 aa6.75□□□□□ -1.33
VTI1A-207ENST00000489357 PERPQ96FX8 193 aa6.75□□□□□ -1.33
VTI1A-207ENST00000489357 ACY3Q96HD9 319 aa6.75□□□□□ -1.33
VTI1A-207ENST00000489357 SFRP2Q96HF1 295 aa6.75□□□□□ -1.33
VTI1A-207ENST00000489357 ZNF48Q96MX3 618 aaPredicted RBP6.75□□□□□ -1.33
VTI1A-207ENST00000489357 ONECUT1Q9UBC0 465 aa6.75□□□□□ -1.33
VTI1A-207ENST00000489357 TBL2Q9Y4P3 447 aaKnown RBP6.75□□□□□ -1.33
VTI1A-207ENST00000489357 URGCP-MRPS24S4R325 110 aa6.75□□□□□ -1.33
VTI1A-207ENST00000489357 TGIF2-C20orf24A0A0A6YYL0 155 aa6.74□□□□□ -1.33
VTI1A-207ENST00000489357 ZNF98A6NK75 572 aa6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms