RNA–Protein interactions for RNA: ENST00000489352.5

HDAC6-233, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 585 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-233ENST00000489352 PLAC8L1A1L4L8 177 aa7.73□□□□□ -1.17
HDAC6-233ENST00000489352 F6UB75 175 aa7.73□□□□□ -1.17
HDAC6-233ENST00000489352 SLC17A2O00624 439 aa7.73□□□□□ -1.17
HDAC6-233ENST00000489352 CLN5O75503 358 aa7.73□□□□□ -1.17
HDAC6-233ENST00000489352 HIST1H1DP16402 221 aaKnown RBP7.73□□□□□ -1.17
HDAC6-233ENST00000489352 HOXA5P20719 270 aa7.73□□□□□ -1.17
HDAC6-233ENST00000489352 PRCDQ00LT1 54 aa7.73□□□□□ -1.17
HDAC6-233ENST00000489352 INSL4Q14641 139 aa7.73□□□□□ -1.17
HDAC6-233ENST00000489352 TBCEQ15813 527 aaPredicted RBP7.73□□□□□ -1.17
HDAC6-233ENST00000489352 C2orf76Q3KRA6 126 aa7.73□□□□□ -1.17
HDAC6-233ENST00000489352 CNIH2Q6PI25 160 aa7.73□□□□□ -1.17
HDAC6-233ENST00000489352 CCDC197Q8NCU1 140 aa7.73□□□□□ -1.17
HDAC6-233ENST00000489352 FAM3DQ96BQ1 224 aa7.73□□□□□ -1.17
HDAC6-233ENST00000489352 TSC22D3Q99576 134 aa7.73□□□□□ -1.17
HDAC6-233ENST00000489352 RPRMQ9NS64 109 aa7.73□□□□□ -1.17
HDAC6-233ENST00000489352 DOK5Q9P104 306 aa7.73□□□□□ -1.17
HDAC6-233ENST00000489352 RAB22AQ9UL26 194 aa7.73□□□□□ -1.17
HDAC6-233ENST00000489352 POMPQ9Y244 141 aa7.73□□□□□ -1.17
HDAC6-233ENST00000489352 A0A0J9YX75 114 aa7.72□□□□□ -1.17
HDAC6-233ENST00000489352 LRCOL1A6NCL2 159 aa7.72□□□□□ -1.17
HDAC6-233ENST00000489352 ZNF98A6NK75 572 aa7.72□□□□□ -1.17
HDAC6-233ENST00000489352 M0R2Z0 102 aa7.72□□□□□ -1.17
HDAC6-233ENST00000489352 CORTO00230 105 aa7.72□□□□□ -1.17
HDAC6-233ENST00000489352 IGLV2-8P01709 118 aa7.72□□□□□ -1.17
HDAC6-233ENST00000489352 CD1AP06126 327 aa7.72□□□□□ -1.17
HDAC6-233ENST00000489352 DTYMKP23919 212 aa7.72□□□□□ -1.17
HDAC6-233ENST00000489352 G6PCP35575 357 aa7.72□□□□□ -1.17
HDAC6-233ENST00000489352 CLDN12P56749 244 aa7.72□□□□□ -1.17
HDAC6-233ENST00000489352 MSMO1Q15800 293 aa7.72□□□□□ -1.17
HDAC6-233ENST00000489352 SPINK13Q1W4C9 94 aa7.72□□□□□ -1.17
HDAC6-233ENST00000489352 TIGITQ495A1 244 aa7.72□□□□□ -1.17
HDAC6-233ENST00000489352 LELP1Q5T871 98 aa7.72□□□□□ -1.17
HDAC6-233ENST00000489352 GPR141Q7Z602 305 aa7.72□□□□□ -1.17
HDAC6-233ENST00000489352 OR4A16Q8NH70 328 aa7.72□□□□□ -1.17
HDAC6-233ENST00000489352 CENPNQ96H22 339 aaPredicted RBP7.72□□□□□ -1.17
HDAC6-233ENST00000489352 SLC5A7Q9GZV3 580 aa7.72□□□□□ -1.17
HDAC6-233ENST00000489352 KLK11Q9UBX7 282 aa7.72□□□□□ -1.17
HDAC6-233ENST00000489352 PFDN2Q9UHV9 154 aa7.72□□□□□ -1.17
HDAC6-233ENST00000489352 DIMT1Q9UNQ2 313 aaKnown RBP7.72□□□□□ -1.17
HDAC6-233ENST00000489352 TRAV5A0A0B4J249 113 aa7.71□□□□□ -1.18
HDAC6-233ENST00000489352 GAGE12BA1L429 117 aa7.71□□□□□ -1.18
HDAC6-233ENST00000489352 GAGE7O76087 117 aa7.71□□□□□ -1.18
HDAC6-233ENST00000489352 RLN2P04090 185 aa7.71□□□□□ -1.18
HDAC6-233ENST00000489352 ALPLP05186 524 aa7.71□□□□□ -1.18
HDAC6-233ENST00000489352 GAGE12FP0CL80 117 aa7.71□□□□□ -1.18
HDAC6-233ENST00000489352 GAGE12GP0CL81 117 aa7.71□□□□□ -1.18
HDAC6-233ENST00000489352 GAGE12IP0CL82 117 aa7.71□□□□□ -1.18
HDAC6-233ENST00000489352 OPRK1P41145 380 aa7.71□□□□□ -1.18
HDAC6-233ENST00000489352 SUB1P53999 127 aaKnown RBP eCLIP7.71□□□□□ -1.18
HDAC6-233ENST00000489352 TMEM256Q8N2U0 113 aa7.71□□□□□ -1.18
HDAC6-233ENST00000489352 MS4A15Q8N5U1 240 aa7.71□□□□□ -1.18
HDAC6-233ENST00000489352 TMEM80Q96HE8 168 aa7.71□□□□□ -1.18
HDAC6-233ENST00000489352 CHAC1Q9BUX1 264 aa7.71□□□□□ -1.18
HDAC6-233ENST00000489352 DAPK2Q9UIK4 370 aa7.71□□□□□ -1.18
HDAC6-233ENST00000489352 BUB3O43684 328 aa7.7□□□□□ -1.18
HDAC6-233ENST00000489352 IL4P05112 153 aa7.7□□□□□ -1.18
HDAC6-233ENST00000489352 TAS2R60P59551 318 aa7.7□□□□□ -1.18
HDAC6-233ENST00000489352 ARL6IP1Q15041 203 aa7.7□□□□□ -1.18
HDAC6-233ENST00000489352 SMN1Q16637 294 aaKnown RBP7.7□□□□□ -1.18
HDAC6-233ENST00000489352 ZNF493Q6ZR52 646 aa7.7□□□□□ -1.18
HDAC6-233ENST00000489352 BAP18Q8IXM2 172 aa7.7□□□□□ -1.18
HDAC6-233ENST00000489352 C10orf126Q8N4M7 172 aa7.7□□□□□ -1.18
HDAC6-233ENST00000489352 LRTM2Q8N967 370 aa7.7□□□□□ -1.18
HDAC6-233ENST00000489352 OR6F1Q8NGZ6 308 aa7.7□□□□□ -1.18
HDAC6-233ENST00000489352 OR4X1Q8NH49 305 aa7.7□□□□□ -1.18
HDAC6-233ENST00000489352 LINC00467Q9BRT7 94 aa7.7□□□□□ -1.18
HDAC6-233ENST00000489352 WDR12Q9GZL7 423 aaKnown RBP7.7□□□□□ -1.18
HDAC6-233ENST00000489352 ICOSQ9Y6W8 199 aa7.7□□□□□ -1.18
HDAC6-233ENST00000489352 TMEM272A0A1B0GTI8 110 aa7.69□□□□□ -1.18
HDAC6-233ENST00000489352 METTL21EPA6NDL7 271 aa7.69□□□□□ -1.18
HDAC6-233ENST00000489352 CRYGDP07320 174 aa7.69□□□□□ -1.18
HDAC6-233ENST00000489352 ZNF182P17025 639 aaPredicted RBP7.69□□□□□ -1.18
HDAC6-233ENST00000489352 UCP1P25874 307 aa7.69□□□□□ -1.18
HDAC6-233ENST00000489352 CALRP27797 417 aaKnown RBP7.69□□□□□ -1.18
HDAC6-233ENST00000489352 FCGR2CP31995 323 aa7.69□□□□□ -1.18
HDAC6-233ENST00000489352 NUP62P37198 522 aaPredicted RBP7.69□□□□□ -1.18
HDAC6-233ENST00000489352 LPAR6P43657 344 aa7.69□□□□□ -1.18
HDAC6-233ENST00000489352 FXYD4P59646 89 aa7.69□□□□□ -1.18
HDAC6-233ENST00000489352 HACD4Q5VWC8 232 aa7.69□□□□□ -1.18
HDAC6-233ENST00000489352 PPP1R14DQ9NXH3 145 aa7.69□□□□□ -1.18
HDAC6-233ENST00000489352 AK6Q9Y3D8 172 aaKnown RBP7.69□□□□□ -1.18
HDAC6-233ENST00000489352 TRAV12-2A0A075B6T6 113 aa7.68□□□□□ -1.18
HDAC6-233ENST00000489352 ISLRO14498 428 aa7.68□□□□□ -1.18
HDAC6-233ENST00000489352 EI24O14681 340 aa7.68□□□□□ -1.18
HDAC6-233ENST00000489352 MYL12BO14950 172 aa7.68□□□□□ -1.18
HDAC6-233ENST00000489352 GYG2O15488 501 aa7.68□□□□□ -1.18
HDAC6-233ENST00000489352 DUSP14O95147 198 aaKnown RBP7.68□□□□□ -1.18
HDAC6-233ENST00000489352 IGKV1-17P01599 117 aa7.68□□□□□ -1.18
HDAC6-233ENST00000489352 F2RP25116 425 aa7.68□□□□□ -1.18
HDAC6-233ENST00000489352 ETV6P41212 452 aa7.68□□□□□ -1.18
HDAC6-233ENST00000489352 DHODHQ02127 395 aa7.68□□□□□ -1.18
HDAC6-233ENST00000489352 ASAH1Q13510 395 aa7.68□□□□□ -1.18
HDAC6-233ENST00000489352 Q6ZRU5 148 aa7.68□□□□□ -1.18
HDAC6-233ENST00000489352 TMEM263Q8WUH6 116 aaKnown RBP7.68□□□□□ -1.18
HDAC6-233ENST00000489352 BORCS5Q969J3 196 aa7.68□□□□□ -1.18
HDAC6-233ENST00000489352 VSIG2Q96IQ7 327 aa7.68□□□□□ -1.18
HDAC6-233ENST00000489352 CCDC90BQ9GZT6 254 aa7.68□□□□□ -1.18
HDAC6-233ENST00000489352 ANXA10Q9UJ72 324 aa7.68□□□□□ -1.18
HDAC6-233ENST00000489352 EFCAB10A6NFE3 127 aa7.67□□□□□ -1.18
HDAC6-233ENST00000489352 SNURFLB1AK76 121 aa7.67□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms