RNA–Protein interactions for RNA: ENST00000489142.5

VTI1A-206, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-206ENST00000489142 METTL26Q96S19 204 aa10.34□□□□□ -0.75
VTI1A-206ENST00000489142 SHPKQ9UHJ6 478 aa10.34□□□□□ -0.75
VTI1A-206ENST00000489142 RYR2Q92736 4967 aa10.34□□□□□ -0.75
VTI1A-206ENST00000489142 ANXA3P12429 323 aa10.33□□□□□ -0.76
VTI1A-206ENST00000489142 VAMP1P23763 118 aa10.33□□□□□ -0.76
VTI1A-206ENST00000489142 CRYBB3P26998 211 aa10.33□□□□□ -0.76
VTI1A-206ENST00000489142 BMI1P35226 326 aa10.33□□□□□ -0.76
VTI1A-206ENST00000489142 P2RY1P47900 373 aa10.33□□□□□ -0.76
VTI1A-206ENST00000489142 AP3S2P59780 193 aa10.33□□□□□ -0.76
VTI1A-206ENST00000489142 DEFB131AP59861 70 aa10.33□□□□□ -0.76
VTI1A-206ENST00000489142 PAFAH1B2P68402 229 aa10.33□□□□□ -0.76
VTI1A-206ENST00000489142 PMS2P11Q13670 270 aa10.33□□□□□ -0.76
VTI1A-206ENST00000489142 Q6ZWC4 215 aa10.33□□□□□ -0.76
VTI1A-206ENST00000489142 LYG2Q86SG7 212 aa10.33□□□□□ -0.76
VTI1A-206ENST00000489142 STXBP6Q8NFX7 210 aa10.33□□□□□ -0.76
VTI1A-206ENST00000489142 OR1S2Q8NGQ3 325 aa10.33□□□□□ -0.76
VTI1A-206ENST00000489142 OR1S1Q8NH92 325 aa10.33□□□□□ -0.76
VTI1A-206ENST00000489142 RNASEH2CQ8TDP1 164 aaKnown RBP10.33□□□□□ -0.76
VTI1A-206ENST00000489142 DTD1Q8TEA8 209 aa10.33□□□□□ -0.76
VTI1A-206ENST00000489142 NPIPB3Q92617 1050 aa10.33□□□□□ -0.76
VTI1A-206ENST00000489142 HSPB7Q9UBY9 170 aa10.33□□□□□ -0.76
VTI1A-206ENST00000489142 AGRNO00468 2067 aa10.32□□□□□ -0.76
VTI1A-206ENST00000489142 TRAV30A0A087WSZ9 112 aa10.32□□□□□ -0.76
VTI1A-206ENST00000489142 SCGB2A1O75556 95 aa10.32□□□□□ -0.76
VTI1A-206ENST00000489142 IL17DQ8TAD2 202 aa10.32□□□□□ -0.76
VTI1A-206ENST00000489142 RNF183Q96D59 192 aa10.32□□□□□ -0.76
VTI1A-206ENST00000489142 SACSQ9NZJ4 4579 aa10.31□□□□□ -0.76
VTI1A-206ENST00000489142 KIR2DL5BA0A0G2JN68 375 aa10.31□□□□□ -0.76
VTI1A-206ENST00000489142 KIR2DL5BA0A0G2JPC4 375 aa10.31□□□□□ -0.76
VTI1A-206ENST00000489142 LINC00854A0A1B0GVQ3 168 aa10.31□□□□□ -0.76
VTI1A-206ENST00000489142 UBE2CO00762 179 aa10.31□□□□□ -0.76
VTI1A-206ENST00000489142 IAPPP10997 89 aa10.31□□□□□ -0.76
VTI1A-206ENST00000489142 SLC25A4P12235 298 aa10.31□□□□□ -0.76
VTI1A-206ENST00000489142 SRPXP78539 464 aa10.31□□□□□ -0.76
VTI1A-206ENST00000489142 PPP1R1AQ13522 171 aa10.31□□□□□ -0.76
VTI1A-206ENST00000489142 USF2Q15853 346 aaPredicted RBP10.31□□□□□ -0.76
VTI1A-206ENST00000489142 TMEM128Q5BJH2 165 aa10.31□□□□□ -0.76
VTI1A-206ENST00000489142 KIR2DL5AQ8N109 375 aa10.31□□□□□ -0.76
VTI1A-206ENST00000489142 KIR2DL5BQ8NHK3 375 aa10.31□□□□□ -0.76
VTI1A-206ENST00000489142 SRRQ9GZT4 340 aa10.31□□□□□ -0.76
VTI1A-206ENST00000489142 TMEM231Q9H6L2 316 aa10.31□□□□□ -0.76
VTI1A-206ENST00000489142 TP53TG1Q9Y2A0 90 aa10.31□□□□□ -0.76
VTI1A-206ENST00000489142 A0A1W2PS18 150 aa10.3□□□□□ -0.76
VTI1A-206ENST00000489142 CXorf65A6NEN9 183 aa10.3□□□□□ -0.76
VTI1A-206ENST00000489142 IL4P05112 153 aa10.3□□□□□ -0.76
VTI1A-206ENST00000489142 CD5P06127 495 aa10.3□□□□□ -0.76
VTI1A-206ENST00000489142 BAK1Q16611 211 aa10.3□□□□□ -0.76
VTI1A-206ENST00000489142 SPANXN2Q5MJ10 180 aa10.3□□□□□ -0.76
VTI1A-206ENST00000489142 Q8WTZ3 238 aa10.3□□□□□ -0.76
VTI1A-206ENST00000489142 CSTL1Q9H114 145 aa10.3□□□□□ -0.76
VTI1A-206ENST00000489142 PAIP2BQ9ULR5 123 aaKnown RBP10.3□□□□□ -0.76
VTI1A-206ENST00000489142 U3KQ87 197 aa10.3□□□□□ -0.76
VTI1A-206ENST00000489142 KNCNA6PVL3 124 aa10.29□□□□□ -0.76
VTI1A-206ENST00000489142 MPTX1A8MV57 137 aa10.29□□□□□ -0.76
VTI1A-206ENST00000489142 K7EQG2 157 aa10.29□□□□□ -0.76
VTI1A-206ENST00000489142 SFT2D2O95562 160 aa10.29□□□□□ -0.76
VTI1A-206ENST00000489142 CA1P00915 261 aaPredicted RBP10.29□□□□□ -0.76
VTI1A-206ENST00000489142 IFNA4P05014 189 aa10.29□□□□□ -0.76
VTI1A-206ENST00000489142 HNRNPCP07910 306 aaKnown RBP eCLIP10.29□□□□□ -0.76
VTI1A-206ENST00000489142 HOXB5P09067 269 aa10.29□□□□□ -0.76
VTI1A-206ENST00000489142 ZNF688P0C7X2 276 aa10.29□□□□□ -0.76
VTI1A-206ENST00000489142 CMC4P56277 68 aaPredicted RBP10.29□□□□□ -0.76
VTI1A-206ENST00000489142 YPEL3P61236 119 aaPredicted RBP10.29□□□□□ -0.76
VTI1A-206ENST00000489142 ETFRF1Q6IPR1 90 aa10.29□□□□□ -0.76
VTI1A-206ENST00000489142 NARS2Q96I59 477 aaKnown RBP10.29□□□□□ -0.76
VTI1A-206ENST00000489142 MAGT1Q9H0U3 335 aa10.29□□□□□ -0.76
VTI1A-206ENST00000489142 U3KQE9 123 aa10.29□□□□□ -0.76
VTI1A-206ENST00000489142 ZNF701M0R085 212 aaPredicted RBP10.28□□□□□ -0.76
VTI1A-206ENST00000489142 PITX3O75364 302 aa10.28□□□□□ -0.76
VTI1A-206ENST00000489142 TOMM40O96008 361 aa10.28□□□□□ -0.76
VTI1A-206ENST00000489142 RD3LP0DJH9 198 aa10.28□□□□□ -0.76
VTI1A-206ENST00000489142 PSG1P11464 419 aa10.28□□□□□ -0.76
VTI1A-206ENST00000489142 NOXA1Q86UR1 476 aa10.28□□□□□ -0.76
VTI1A-206ENST00000489142 CENPSQ8N2Z9 138 aa10.28□□□□□ -0.76
VTI1A-206ENST00000489142 OR51G1Q8NGK1 321 aa10.28□□□□□ -0.76
VTI1A-206ENST00000489142 GLMPQ8WWB7 406 aa10.28□□□□□ -0.76
VTI1A-206ENST00000489142 GRAMD2BQ96HH9 432 aa10.28□□□□□ -0.76
VTI1A-206ENST00000489142 SDHCQ99643 169 aaPredicted RBP10.28□□□□□ -0.76
VTI1A-206ENST00000489142 SLC25A21Q9BQT8 299 aaPredicted RBP10.28□□□□□ -0.76
VTI1A-206ENST00000489142 CACFD1Q9UGQ2 172 aa10.28□□□□□ -0.76
VTI1A-206ENST00000489142 FLVCR2Q9UPI3 526 aa10.28□□□□□ -0.76
VTI1A-206ENST00000489142 TRAV2A0A0B4J234 112 aa10.27□□□□□ -0.77
VTI1A-206ENST00000489142 DUXBA0A1W2PPF3 345 aa10.27□□□□□ -0.77
VTI1A-206ENST00000489142 INPP1P49441 399 aa10.27□□□□□ -0.77
VTI1A-206ENST00000489142 ZNF90Q03938 601 aa10.27□□□□□ -0.77
VTI1A-206ENST00000489142 DHRS2Q13268 280 aa10.27□□□□□ -0.77
VTI1A-206ENST00000489142 GAMTQ14353 236 aa10.27□□□□□ -0.77
VTI1A-206ENST00000489142 TRIQKQ629K1 86 aa10.27□□□□□ -0.77
VTI1A-206ENST00000489142 C16orf54Q6UWD8 224 aa10.27□□□□□ -0.77
VTI1A-206ENST00000489142 GSG1LQ6UXU4 331 aa10.27□□□□□ -0.77
VTI1A-206ENST00000489142 STHQ8IWL8 128 aa10.27□□□□□ -0.77
VTI1A-206ENST00000489142 LRTM2Q8N967 370 aa10.27□□□□□ -0.77
VTI1A-206ENST00000489142 DCANP1Q8TF63 244 aa10.27□□□□□ -0.77
VTI1A-206ENST00000489142 SLC35E1Q96K37 410 aa10.27□□□□□ -0.77
VTI1A-206ENST00000489142 PBDC1Q9BVG4 233 aa10.27□□□□□ -0.77
VTI1A-206ENST00000489142 IGKV1D-37A0A075B6S9 117 aa10.26□□□□□ -0.77
VTI1A-206ENST00000489142 ZFP92A6NM28 416 aa10.26□□□□□ -0.77
VTI1A-206ENST00000489142 DEFB4AO15263 64 aa10.26□□□□□ -0.77
VTI1A-206ENST00000489142 JTBO76095 146 aa10.26□□□□□ -0.77
VTI1A-206ENST00000489142 OR2F1Q13607 317 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms