RNA–Protein interactions for RNA: ENST00000489111.1

USP11-211, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 3

Gene USP11, Length 516 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-211ENST00000489111 SLC25A22Q9H936 323 aa7.84□□□□□ -1.15
USP11-211ENST00000489111 ZNF702PQ9H963 129 aa7.84□□□□□ -1.15
USP11-211ENST00000489111 GAR1Q9NY12 217 aaKnown RBP7.84□□□□□ -1.15
USP11-211ENST00000489111 S4R3C0 116 aa7.84□□□□□ -1.15
USP11-211ENST00000489111 CSPG4Q6UVK1 2322 aa7.84□□□□□ -1.15
USP11-211ENST00000489111 MYO9AB2RTY4 2548 aa7.83□□□□□ -1.16
USP11-211ENST00000489111 IGKV1D-37A0A075B6S9 117 aa7.83□□□□□ -1.16
USP11-211ENST00000489111 CTXND1A0A1B0GTU2 59 aa7.83□□□□□ -1.16
USP11-211ENST00000489111 A0A1B0GV50 99 aa7.83□□□□□ -1.16
USP11-211ENST00000489111 A0A1W2PPV4 95 aa7.83□□□□□ -1.16
USP11-211ENST00000489111 MAP1LC3B2A6NCE7 125 aa7.83□□□□□ -1.16
USP11-211ENST00000489111 NUDT19A8MXV4 375 aa7.83□□□□□ -1.16
USP11-211ENST00000489111 CLDN34H7C241 214 aa7.83□□□□□ -1.16
USP11-211ENST00000489111 YIF1AO95070 293 aa7.83□□□□□ -1.16
USP11-211ENST00000489111 IGLC1P0CG04 106 aa7.83□□□□□ -1.16
USP11-211ENST00000489111 RHOBP62745 196 aa7.83□□□□□ -1.16
USP11-211ENST00000489111 SLC35B1P78383 322 aa7.83□□□□□ -1.16
USP11-211ENST00000489111 ZNF90Q03938 601 aa7.83□□□□□ -1.16
USP11-211ENST00000489111 KLK9Q2XQG4 91 aa7.83□□□□□ -1.16
USP11-211ENST00000489111 TIGITQ495A1 244 aa7.83□□□□□ -1.16
USP11-211ENST00000489111 GCSAMLQ5JQS6 135 aa7.83□□□□□ -1.16
USP11-211ENST00000489111 LCN15Q6UWW0 184 aa7.83□□□□□ -1.16
USP11-211ENST00000489111 IL34Q6ZMJ4 242 aa7.83□□□□□ -1.16
USP11-211ENST00000489111 Q71RC1 249 aaPredicted RBP7.83□□□□□ -1.16
USP11-211ENST00000489111 JMJD8Q96S16 334 aa7.83□□□□□ -1.16
USP11-211ENST00000489111 PFDN5Q99471 154 aa7.83□□□□□ -1.16
USP11-211ENST00000489111 TXN2Q99757 166 aa7.83□□□□□ -1.16
USP11-211ENST00000489111 MAP1LC3BQ9GZQ8 125 aa7.83□□□□□ -1.16
USP11-211ENST00000489111 MED9Q9NWA0 146 aa7.83□□□□□ -1.16
USP11-211ENST00000489111 KLK9Q9UKQ9 250 aa7.83□□□□□ -1.16
USP11-211ENST00000489111 FLNBO75369 2602 aaKnown RBP7.83□□□□□ -1.16
USP11-211ENST00000489111 TRBV7-1A0A0A6YYK4 115 aa7.82□□□□□ -1.16
USP11-211ENST00000489111 OR2T8A6NH00 312 aa7.82□□□□□ -1.16
USP11-211ENST00000489111 SEC14L6B5MCN3 397 aa7.82□□□□□ -1.16
USP11-211ENST00000489111 INAFM1C9JVW0 142 aa7.82□□□□□ -1.16
USP11-211ENST00000489111 NUPL2O15504 423 aaKnown RBP7.82□□□□□ -1.16
USP11-211ENST00000489111 BRI3O95415 125 aa7.82□□□□□ -1.16
USP11-211ENST00000489111 IGHV3-23P01764 117 aa7.82□□□□□ -1.16
USP11-211ENST00000489111 CRYBA1P05813 215 aa7.82□□□□□ -1.16
USP11-211ENST00000489111 RD3LP0DJH9 198 aa7.82□□□□□ -1.16
USP11-211ENST00000489111 GATA2P23769 480 aaPredicted RBP7.82□□□□□ -1.16
USP11-211ENST00000489111 PPIFP30405 207 aaKnown RBP7.82□□□□□ -1.16
USP11-211ENST00000489111 GPR183P32249 361 aa7.82□□□□□ -1.16
USP11-211ENST00000489111 IQCF2Q8IXL9 164 aa7.82□□□□□ -1.16
USP11-211ENST00000489111 Q8N2B8 174 aa7.82□□□□□ -1.16
USP11-211ENST00000489111 RPP25LQ8N5L8 163 aaKnown RBP7.82□□□□□ -1.16
USP11-211ENST00000489111 COMMD1Q8N668 190 aa7.82□□□□□ -1.16
USP11-211ENST00000489111 OR1L4Q8NGR5 311 aa7.82□□□□□ -1.16
USP11-211ENST00000489111 ZNF502Q8TBZ5 544 aa7.82□□□□□ -1.16
USP11-211ENST00000489111 RAB24Q969Q5 203 aa7.82□□□□□ -1.16
USP11-211ENST00000489111 USMG5Q96IX5 58 aa7.82□□□□□ -1.16
USP11-211ENST00000489111 RNF2Q99496 336 aa7.82□□□□□ -1.16
USP11-211ENST00000489111 C19orf24Q9BVV8 132 aa7.82□□□□□ -1.16
USP11-211ENST00000489111 GSX1Q9H4S2 264 aaPredicted RBP7.82□□□□□ -1.16
USP11-211ENST00000489111 DOK5Q9P104 306 aa7.82□□□□□ -1.16
USP11-211ENST00000489111 TNCP24821 2201 aa7.82□□□□□ -1.16
USP11-211ENST00000489111 TET2Q6N021 2002 aaPredicted RBP7.81□□□□□ -1.16
USP11-211ENST00000489111 AKAP9Q99996 3911 aa7.81□□□□□ -1.16
USP11-211ENST00000489111 NAV3Q8IVL0 2385 aa7.81□□□□□ -1.16
USP11-211ENST00000489111 TEX15Q9BXT5 2789 aa7.81□□□□□ -1.16
USP11-211ENST00000489111 TRAV1-1A0A0B4J248 108 aa7.81□□□□□ -1.16
USP11-211ENST00000489111 A0A0G2JLM5 398 aa7.81□□□□□ -1.16
USP11-211ENST00000489111 TMEM89A2RUT3 159 aa7.81□□□□□ -1.16
USP11-211ENST00000489111 PSMB11A5LHX3 300 aa7.81□□□□□ -1.16
USP11-211ENST00000489111 FAM181BA6NEQ2 426 aa7.81□□□□□ -1.16
USP11-211ENST00000489111 ATP6V1G1O75348 118 aa7.81□□□□□ -1.16
USP11-211ENST00000489111 TOMM40O96008 361 aa7.81□□□□□ -1.16
USP11-211ENST00000489111 IGKV1-17P01599 117 aa7.81□□□□□ -1.16
USP11-211ENST00000489111 IGLV1-40P01703 118 aa7.81□□□□□ -1.16
USP11-211ENST00000489111 IGHG4P01861 327 aa7.81□□□□□ -1.16
USP11-211ENST00000489111 RNASE1P07998 156 aaKnown RBP7.81□□□□□ -1.16
USP11-211ENST00000489111 OR5G3P0C626 314 aa7.81□□□□□ -1.16
USP11-211ENST00000489111 FCGR2BP31994 310 aaPredicted RBP7.81□□□□□ -1.16
USP11-211ENST00000489111 HILS1P60008 231 aa7.81□□□□□ -1.16
USP11-211ENST00000489111 RPL15P61313 204 aaKnown RBP7.81□□□□□ -1.16
USP11-211ENST00000489111 LYZP61626 148 aa7.81□□□□□ -1.16
USP11-211ENST00000489111 CFHR3Q02985 330 aa7.81□□□□□ -1.16
USP11-211ENST00000489111 ZNF726P1Q15940 193 aa7.81□□□□□ -1.16
USP11-211ENST00000489111 C10orf113Q5VZT2 155 aa7.81□□□□□ -1.16
USP11-211ENST00000489111 OR1B1Q8NGR6 318 aa7.81□□□□□ -1.16
USP11-211ENST00000489111 GATAD1Q8WUU5 269 aa7.81□□□□□ -1.16
USP11-211ENST00000489111 MBD3L1Q8WWY6 194 aa7.81□□□□□ -1.16
USP11-211ENST00000489111 MARC2Q969Z3 335 aa7.81□□□□□ -1.16
USP11-211ENST00000489111 CITED4Q96RK1 184 aa7.81□□□□□ -1.16
USP11-211ENST00000489111 PBDC1Q9BVG4 233 aa7.81□□□□□ -1.16
USP11-211ENST00000489111 MRPL32Q9BYC8 188 aaKnown RBP7.81□□□□□ -1.16
USP11-211ENST00000489111 GNB4Q9HAV0 340 aa7.81□□□□□ -1.16
USP11-211ENST00000489111 ESM1Q9NQ30 184 aa7.81□□□□□ -1.16
USP11-211ENST00000489111 TLN2Q9Y4G6 2542 aa7.8□□□□□ -1.16
USP11-211ENST00000489111 ELOA3CA0A087WX78 387 aaPredicted RBP7.8□□□□□ -1.16
USP11-211ENST00000489111 RAB19A4D1S5 217 aa7.8□□□□□ -1.16
USP11-211ENST00000489111 HMGB3O15347 200 aaKnown RBP7.8□□□□□ -1.16
USP11-211ENST00000489111 HYPMO75409 117 aa7.8□□□□□ -1.16
USP11-211ENST00000489111 IFNA1P01562 189 aa7.8□□□□□ -1.16
USP11-211ENST00000489111 PSG1P11464 419 aa7.8□□□□□ -1.16
USP11-211ENST00000489111 ORM2P19652 201 aa7.8□□□□□ -1.16
USP11-211ENST00000489111 FGF8P55075 233 aaPredicted RBP7.8□□□□□ -1.16
USP11-211ENST00000489111 TAS2R45P59539 299 aa7.8□□□□□ -1.16
USP11-211ENST00000489111 YPEL3P61236 119 aaPredicted RBP7.8□□□□□ -1.16
USP11-211ENST00000489111 FAM78BQ5VT40 261 aa7.8□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms