RNA–Protein interactions for RNA: ENST00000488834.5

SSR1-209, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 4

Gene SSR1, Length 585 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-209ENST00000488834 SS18L2Q9UHA2 77 aa2.13□□□□□ -2.07
SSR1-209ENST00000488834 VPREB3Q9UKI3 123 aa2.13□□□□□ -2.07
SSR1-209ENST00000488834 LAMTOR2Q9Y2Q5 125 aa2.13□□□□□ -2.07
SSR1-209ENST00000488834 LSM2Q9Y333 95 aaKnown RBP2.13□□□□□ -2.07
SSR1-209ENST00000488834 WDR90Q96KV7 1748 aa2.13□□□□□ -2.07
SSR1-209ENST00000488834 NYNRINQ9P2P1 1898 aaKnown RBP2.13□□□□□ -2.07
SSR1-209ENST00000488834 PAPPAQ13219 1627 aa2.13□□□□□ -2.07
SSR1-209ENST00000488834 NHSL1Q5SYE7 1610 aa2.13□□□□□ -2.07
SSR1-209ENST00000488834 ANKRD36A6QL64 1941 aa2.13□□□□□ -2.07
SSR1-209ENST00000488834 LRP4O75096 1905 aa2.13□□□□□ -2.07
SSR1-209ENST00000488834 MED12LQ86YW9 2145 aa2.12□□□□□ -2.07
SSR1-209ENST00000488834 DOCK3Q8IZD9 2030 aa2.12□□□□□ -2.07
SSR1-209ENST00000488834 DOCK6Q96HP0 2047 aa2.12□□□□□ -2.07
SSR1-209ENST00000488834 PKD1L3Q7Z443 1732 aa2.12□□□□□ -2.07
SSR1-209ENST00000488834 ERCC6L2Q5T890 1561 aa2.12□□□□□ -2.07
SSR1-209ENST00000488834 TRBV24-1A0A075B6N3 115 aa2.12□□□□□ -2.07
SSR1-209ENST00000488834 FXYD6-FXYD2A0A087WZ82 144 aa2.12□□□□□ -2.07
SSR1-209ENST00000488834 IGKV1-8A0A0C4DH67 115 aa2.12□□□□□ -2.07
SSR1-209ENST00000488834 IGHV1-69-2A0A0G2JMI3 117 aa2.12□□□□□ -2.07
SSR1-209ENST00000488834 TRDV1A0A1B0GX56 115 aa2.12□□□□□ -2.07
SSR1-209ENST00000488834 TMEM235A6NFC5 223 aa2.12□□□□□ -2.07
SSR1-209ENST00000488834 ZNF878C9JN71 531 aa2.12□□□□□ -2.07
SSR1-209ENST00000488834 C9JQL5 133 aa2.12□□□□□ -2.07
SSR1-209ENST00000488834 F5H5P2 479 aa2.12□□□□□ -2.07
SSR1-209ENST00000488834 H7BYZ3 331 aa2.12□□□□□ -2.07
SSR1-209ENST00000488834 GNGT2O14610 69 aa2.12□□□□□ -2.07
SSR1-209ENST00000488834 CREBL2O60519 120 aaPredicted RBP2.12□□□□□ -2.07
SSR1-209ENST00000488834 YPEL1O60688 119 aa2.12□□□□□ -2.07
SSR1-209ENST00000488834 PDCD6O75340 191 aa2.12□□□□□ -2.07
SSR1-209ENST00000488834 ARL6IP5O75915 188 aa2.12□□□□□ -2.07
SSR1-209ENST00000488834 CDS2O95674 445 aa2.12□□□□□ -2.07
SSR1-209ENST00000488834 HAND1O96004 215 aa2.12□□□□□ -2.07
SSR1-209ENST00000488834 HBZP02008 142 aa2.12□□□□□ -2.07
SSR1-209ENST00000488834 TRGC2P03986 189 aa2.12□□□□□ -2.07
SSR1-209ENST00000488834 REG1AP05451 166 aa2.12□□□□□ -2.07
SSR1-209ENST00000488834 SERPINA7P05543 415 aa2.12□□□□□ -2.07
SSR1-209ENST00000488834 IL3P08700 152 aa2.12□□□□□ -2.07
SSR1-209ENST00000488834 ZNF688P0C7X2 276 aa2.12□□□□□ -2.07
SSR1-209ENST00000488834 LINC00869P0C866 280 aa2.12□□□□□ -2.07
SSR1-209ENST00000488834 IGLC1P0CG04 106 aa2.12□□□□□ -2.07
SSR1-209ENST00000488834 OR12D1P0DN82 309 aa2.12□□□□□ -2.07
SSR1-209ENST00000488834 PRSS3P35030 304 aa2.12□□□□□ -2.07
SSR1-209ENST00000488834 SYNJ2BPP57105 145 aa2.12□□□□□ -2.07
SSR1-209ENST00000488834 TAS2R30P59541 319 aa2.12□□□□□ -2.07
SSR1-209ENST00000488834 S100A10P60903 97 aa2.12□□□□□ -2.07
SSR1-209ENST00000488834 HSD52Q0P140 79 aa2.12□□□□□ -2.07
SSR1-209ENST00000488834 PLCXD2Q0VAA5 305 aa2.12□□□□□ -2.07
SSR1-209ENST00000488834 EDDM3AQ14507 147 aa2.12□□□□□ -2.07
SSR1-209ENST00000488834 PDGFRLQ15198 375 aa2.12□□□□□ -2.07
SSR1-209ENST00000488834 MMDQ15546 238 aa2.12□□□□□ -2.07
SSR1-209ENST00000488834 TRMT12Q53H54 448 aaKnown RBP2.12□□□□□ -2.07
SSR1-209ENST00000488834 TMEM97Q5BJF2 176 aa2.12□□□□□ -2.07
SSR1-209ENST00000488834 GLT8D1Q68CQ7 371 aa2.12□□□□□ -2.07
SSR1-209ENST00000488834 SFXN4Q6P4A7 337 aa2.12□□□□□ -2.07
SSR1-209ENST00000488834 NTM-AS1Q6ZSK4 140 aa2.12□□□□□ -2.07
SSR1-209ENST00000488834 OLIG3Q7RTU3 272 aa2.12□□□□□ -2.07
SSR1-209ENST00000488834 WDR86Q86TI4 376 aa2.12□□□□□ -2.07
SSR1-209ENST00000488834 ZNF567Q8N184 647 aa2.12□□□□□ -2.07
SSR1-209ENST00000488834 SMIM20Q8N5G0 67 aa2.12□□□□□ -2.07
SSR1-209ENST00000488834 C5orf17Q8NAS9 161 aa2.12□□□□□ -2.07
SSR1-209ENST00000488834 OR11G2Q8NGC1 345 aa2.12□□□□□ -2.07
SSR1-209ENST00000488834 OR4D11Q8NGI4 311 aa2.12□□□□□ -2.07
SSR1-209ENST00000488834 OR5D16Q8NGK9 328 aa2.12□□□□□ -2.07
SSR1-209ENST00000488834 ZNF418Q8TF45 676 aaPredicted RBP2.12□□□□□ -2.07
SSR1-209ENST00000488834 CCL17Q92583 94 aa2.12□□□□□ -2.07
SSR1-209ENST00000488834 PTX4Q96A99 478 aa2.12□□□□□ -2.07
SSR1-209ENST00000488834 YPEL2Q96QA6 119 aa2.12□□□□□ -2.07
SSR1-209ENST00000488834 OR4K3Q96R72 315 aa2.12□□□□□ -2.07
SSR1-209ENST00000488834 ZNF649Q9BS31 505 aa2.12□□□□□ -2.07
SSR1-209ENST00000488834 FXYD6Q9H0Q3 95 aa2.12□□□□□ -2.07
SSR1-209ENST00000488834 ATG5Q9H1Y0 275 aa2.12□□□□□ -2.07
SSR1-209ENST00000488834 POMKQ9H5K3 350 aa2.12□□□□□ -2.07
SSR1-209ENST00000488834 TAF9BQ9HBM6 251 aa2.12□□□□□ -2.07
SSR1-209ENST00000488834 PARP11Q9NR21 331 aa2.12□□□□□ -2.07
SSR1-209ENST00000488834 CA10Q9NS85 328 aa2.12□□□□□ -2.07
SSR1-209ENST00000488834 TMEM242Q9NWH2 141 aa2.12□□□□□ -2.07
SSR1-209ENST00000488834 MED29Q9NX70 200 aa2.12□□□□□ -2.07
SSR1-209ENST00000488834 UQCR10Q9UDW1 63 aa2.12□□□□□ -2.07
SSR1-209ENST00000488834 PRO0628Q9UI54 55 aa2.12□□□□□ -2.07
SSR1-209ENST00000488834 ERG28Q9UKR5 140 aa2.12□□□□□ -2.07
SSR1-209ENST00000488834 FUT9Q9Y231 359 aa2.12□□□□□ -2.07
SSR1-209ENST00000488834 POLR1DQ9Y2S0 133 aa2.12□□□□□ -2.07
SSR1-209ENST00000488834 COQ4Q9Y3A0 265 aa2.12□□□□□ -2.07
SSR1-209ENST00000488834 LRRC37A3O60309 1634 aa2.12□□□□□ -2.07
SSR1-209ENST00000488834 AHDC1Q5TGY3 1603 aaPredicted RBP2.12□□□□□ -2.07
SSR1-209ENST00000488834 SIP14410 1827 aa2.12□□□□□ -2.07
SSR1-209ENST00000488834 ALS2Q96Q42 1657 aa2.12□□□□□ -2.07
SSR1-209ENST00000488834 TET2Q6N021 2002 aaPredicted RBP2.12□□□□□ -2.07
SSR1-209ENST00000488834 KMT2EQ8IZD2 1858 aa2.11□□□□□ -2.07
SSR1-209ENST00000488834 KIF26AQ9ULI4 1882 aaPredicted RBP2.11□□□□□ -2.07
SSR1-209ENST00000488834 PLIN4Q96Q06 1357 aa2.11□□□□□ -2.07
SSR1-209ENST00000488834 TJP1Q07157 1748 aa2.11□□□□□ -2.07
SSR1-209ENST00000488834 COL24A1Q17RW2 1714 aa2.11□□□□□ -2.07
SSR1-209ENST00000488834 DOCK8Q8NF50 2099 aa2.11□□□□□ -2.07
SSR1-209ENST00000488834 DENND4CQ5VZ89 1909 aa2.11□□□□□ -2.07
SSR1-209ENST00000488834 IGLV3-12A0A075B6K2 115 aa2.11□□□□□ -2.07
SSR1-209ENST00000488834 A0A087WX48 190 aa2.11□□□□□ -2.07
SSR1-209ENST00000488834 TRAV14DV4A0A0A6YYC5 116 aa2.11□□□□□ -2.07
SSR1-209ENST00000488834 TRAV38-1A0A0B4J264 116 aa2.11□□□□□ -2.07
SSR1-209ENST00000488834 IGLC7A0M8Q6 106 aa2.11□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 127.1 ms