RNA–Protein interactions for RNA: ENST00000488727.5

CCM2-216, Transcript of CCM2 scaffold protein, humanhuman

TSL 5

Gene CCM2, Length 1,719 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-216ENST00000488727 CD81P60033 236 aa15.27■□□□□ 0.04
CCM2-216ENST00000488727 C19orf24Q9BVV8 132 aa15.27■□□□□ 0.04
CCM2-216ENST00000488727 TPSG1Q9NRR2 321 aa15.27■□□□□ 0.04
CCM2-216ENST00000488727 LSM4Q9Y4Z0 139 aaKnown RBP15.27■□□□□ 0.04
CCM2-216ENST00000488727 PLXNB1O43157 2135 aa15.27■□□□□ 0.03
CCM2-216ENST00000488727 SLC25A17O43808 307 aa15.26■□□□□ 0.03
CCM2-216ENST00000488727 C5orf64Q2M2E5 130 aa15.26■□□□□ 0.03
CCM2-216ENST00000488727 Q8N2B8 174 aa15.26■□□□□ 0.03
CCM2-216ENST00000488727 FAM24BQ8N5W8 94 aa15.26■□□□□ 0.03
CCM2-216ENST00000488727 MGST2Q99735 147 aa15.26■□□□□ 0.03
CCM2-216ENST00000488727 GGTLC1Q9BX51 225 aa15.26■□□□□ 0.03
CCM2-216ENST00000488727 SAV1Q9H4B6 383 aaPredicted RBP15.26■□□□□ 0.03
CCM2-216ENST00000488727 SDF2L1Q9HCN8 221 aa15.26■□□□□ 0.03
CCM2-216ENST00000488727 FKBP11Q9NYL4 201 aa15.26■□□□□ 0.03
CCM2-216ENST00000488727 METTL1Q9UBP6 276 aaKnown RBP15.26■□□□□ 0.03
CCM2-216ENST00000488727 SIGLEC9Q9Y336 463 aa15.26■□□□□ 0.03
CCM2-216ENST00000488727 SMCO3A2RU48 225 aa15.26■□□□□ 0.03
CCM2-216ENST00000488727 KBTBD11O94819 623 aa15.26■□□□□ 0.03
CCM2-216ENST00000488727 IFNA4P05014 189 aa15.26■□□□□ 0.03
CCM2-216ENST00000488727 TMEM158Q8WZ71 300 aa15.26■□□□□ 0.03
CCM2-216ENST00000488727 PRSS22Q9GZN4 317 aa15.26■□□□□ 0.03
CCM2-216ENST00000488727 NPVFQ9HCQ7 196 aa15.26■□□□□ 0.03
CCM2-216ENST00000488727 CRYGBP07316 175 aa15.25■□□□□ 0.03
CCM2-216ENST00000488727 TMEM95Q3KNT9 176 aa15.25■□□□□ 0.03
CCM2-216ENST00000488727 C9orf152Q5JTZ5 239 aa15.25■□□□□ 0.03
CCM2-216ENST00000488727 C1QL4Q86Z23 238 aa15.25■□□□□ 0.03
CCM2-216ENST00000488727 OR5B3Q8NH48 314 aa15.25■□□□□ 0.03
CCM2-216ENST00000488727 LINC01006Q8NI28 216 aa15.25■□□□□ 0.03
CCM2-216ENST00000488727 RASL11BQ9BPW5 248 aa15.25■□□□□ 0.03
CCM2-216ENST00000488727 HSPB9Q9BQS6 159 aa15.25■□□□□ 0.03
CCM2-216ENST00000488727 TMPRSS5Q9H3S3 457 aa15.25■□□□□ 0.03
CCM2-216ENST00000488727 C16orf95Q9H693 158 aa15.25■□□□□ 0.03
CCM2-216ENST00000488727 PLEKHA3Q9HB20 300 aa15.25■□□□□ 0.03
CCM2-216ENST00000488727 TMEM242Q9NWH2 141 aa15.25■□□□□ 0.03
CCM2-216ENST00000488727 EIF3GO75821 320 aaKnown RBP eCLIP15.24■□□□□ 0.03
CCM2-216ENST00000488727 YIF1AO95070 293 aa15.24■□□□□ 0.03
CCM2-216ENST00000488727 CA2P00918 260 aa15.24■□□□□ 0.03
CCM2-216ENST00000488727 SAA1P0DJI8 122 aaPredicted RBP15.24■□□□□ 0.03
CCM2-216ENST00000488727 TMEM89A2RUT3 159 aa15.23■□□□□ 0.03
CCM2-216ENST00000488727 FCN1O00602 326 aa15.23■□□□□ 0.03
CCM2-216ENST00000488727 HLA-DRB1P01911 266 aa15.23■□□□□ 0.03
CCM2-216ENST00000488727 PLGLAQ15195 96 aa15.23■□□□□ 0.03
CCM2-216ENST00000488727 MRGPRG-AS1Q2M3A8 158 aa15.23■□□□□ 0.03
CCM2-216ENST00000488727 BSXQ3C1V8 233 aa15.23■□□□□ 0.03
CCM2-216ENST00000488727 ARSJQ5FYB0 599 aaPredicted RBP15.23■□□□□ 0.03
CCM2-216ENST00000488727 CYP2G1PQ6ZSU1 146 aa15.23■□□□□ 0.03
CCM2-216ENST00000488727 ZFP82Q8N141 532 aa15.23■□□□□ 0.03
CCM2-216ENST00000488727 OR4F5Q8NH21 305 aa15.23■□□□□ 0.03
CCM2-216ENST00000488727 SERTAD4Q9NUC0 356 aa15.23■□□□□ 0.03
CCM2-216ENST00000488727 NAT8Q9UHE5 227 aa15.23■□□□□ 0.03
CCM2-216ENST00000488727 PXMP4Q9Y6I8 212 aa15.23■□□□□ 0.03
CCM2-216ENST00000488727 TNCP24821 2201 aa15.23■□□□□ 0.03
CCM2-216ENST00000488727 TEX50A0A1B0GTY4 177 aa15.23■□□□□ 0.03
CCM2-216ENST00000488727 LINC01548A6NM66 108 aa15.23■□□□□ 0.03
CCM2-216ENST00000488727 ZNF727A8MUV8 499 aa15.23■□□□□ 0.03
CCM2-216ENST00000488727 INS-IGF2F8WCM5 200 aa15.23■□□□□ 0.03
CCM2-216ENST00000488727 HMGB3O15347 200 aaKnown RBP15.23■□□□□ 0.03
CCM2-216ENST00000488727 VMA21Q3ZAQ7 101 aa15.23■□□□□ 0.03
CCM2-216ENST00000488727 OR4A5Q8NH83 315 aa15.23■□□□□ 0.03
CCM2-216ENST00000488727 C2CD4CQ8TF44 421 aa15.23■□□□□ 0.03
CCM2-216ENST00000488727 MDFIQ99750 246 aa15.23■□□□□ 0.03
CCM2-216ENST00000488727 COL6A5A8TX70 2615 aa15.22■□□□□ 0.03
CCM2-216ENST00000488727 IGHG2P01859 326 aa15.22■□□□□ 0.03
CCM2-216ENST00000488727 C2orf83Q53S99 150 aa15.22■□□□□ 0.03
CCM2-216ENST00000488727 TEPPQ6URK8 271 aa15.22■□□□□ 0.03
CCM2-216ENST00000488727 PPP1R27Q86WC6 154 aa15.22■□□□□ 0.03
CCM2-216ENST00000488727 OR2T6Q8NHC8 308 aa15.22■□□□□ 0.03
CCM2-216ENST00000488727 PRELID1Q9Y255 219 aa15.22■□□□□ 0.03
CCM2-216ENST00000488727 IGHV7-81A0A0B4J1V7 117 aa15.21■□□□□ 0.03
CCM2-216ENST00000488727 MYOD1P15172 320 aa15.21■□□□□ 0.03
CCM2-216ENST00000488727 RND2P52198 227 aa15.21■□□□□ 0.03
CCM2-216ENST00000488727 ELOBQ15370 118 aa15.21■□□□□ 0.03
CCM2-216ENST00000488727 TEX45Q8NA69 505 aa15.21■□□□□ 0.03
CCM2-216ENST00000488727 OR1L8Q8NGR8 309 aa15.21■□□□□ 0.03
CCM2-216ENST00000488727 CTDSP1Q9GZU7 261 aa15.21■□□□□ 0.03
CCM2-216ENST00000488727 A0A1W2PPV4 95 aa15.2■□□□□ 0.02
CCM2-216ENST00000488727 RPL29P47914 159 aaKnown RBP15.2■□□□□ 0.02
CCM2-216ENST00000488727 SSBP2P81877 361 aaPredicted RBP15.2■□□□□ 0.02
CCM2-216ENST00000488727 NDPQ00604 133 aa15.2■□□□□ 0.02
CCM2-216ENST00000488727 FOXL1Q12952 345 aa15.2■□□□□ 0.02
CCM2-216ENST00000488727 RAB31Q13636 194 aa15.2■□□□□ 0.02
CCM2-216ENST00000488727 GCSAMLQ5JQS6 135 aa15.2■□□□□ 0.02
CCM2-216ENST00000488727 MIC13Q5XKP0 118 aa15.2■□□□□ 0.02
CCM2-216ENST00000488727 VSTM2AQ8TAG5 236 aa15.2■□□□□ 0.02
CCM2-216ENST00000488727 TMEM167AQ8TBQ9 72 aa15.2■□□□□ 0.02
CCM2-216ENST00000488727 SMIM7Q9BQ49 75 aa15.2■□□□□ 0.02
CCM2-216ENST00000488727 CLPSL1A2RUU4 121 aa15.2■□□□□ 0.02
CCM2-216ENST00000488727 PAGE4O60829 102 aa15.2■□□□□ 0.02
CCM2-216ENST00000488727 STAG3L2P0CL84 134 aa15.2■□□□□ 0.02
CCM2-216ENST00000488727 STAG3L3P0CL85 134 aa15.2■□□□□ 0.02
CCM2-216ENST00000488727 CX3CL1P78423 397 aa15.2■□□□□ 0.02
CCM2-216ENST00000488727 Q8WTZ3 238 aa15.2■□□□□ 0.02
CCM2-216ENST00000488727 GATAD1Q8WUU5 269 aa15.2■□□□□ 0.02
CCM2-216ENST00000488727 TXNDC17Q9BRA2 123 aa15.2■□□□□ 0.02
CCM2-216ENST00000488727 B2MP61769 119 aa15.19■□□□□ 0.02
CCM2-216ENST00000488727 TMEM241Q24JQ0 296 aa15.19■□□□□ 0.02
CCM2-216ENST00000488727 KRTAP21-3Q3LHN1 58 aa15.19■□□□□ 0.02
CCM2-216ENST00000488727 LINC00518Q8N0U6 118 aa15.19■□□□□ 0.02
CCM2-216ENST00000488727 OR4F4Q96R69 305 aa15.19■□□□□ 0.02
CCM2-216ENST00000488727 HINT2Q9BX68 163 aa15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms