RNA–Protein interactions for RNA: ENST00000488325.5

HLA-DOB-209, Transcript of major histocompatibility complex, class II, DO beta, humanhuman

Gene HLA-DOB, Length 1,188 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOB-209ENST00000488325 FNDC4Q9H6D8 234 aaPredicted RBP9.45□□□□□ -0.9
HLA-DOB-209ENST00000488325 PXMP4Q9Y6I8 212 aa9.45□□□□□ -0.9
HLA-DOB-209ENST00000488325 IGLV11-55A0A075B6I3 123 aa9.44□□□□□ -0.9
HLA-DOB-209ENST00000488325 TRAV41A0A0B4J266 112 aa9.44□□□□□ -0.9
HLA-DOB-209ENST00000488325 G3V4G9 280 aa9.44□□□□□ -0.9
HLA-DOB-209ENST00000488325 SCGB2A1O75556 95 aa9.44□□□□□ -0.9
HLA-DOB-209ENST00000488325 IGHG2P01859 326 aa9.44□□□□□ -0.9
HLA-DOB-209ENST00000488325 AMY1AP04745 511 aa9.44□□□□□ -0.9
HLA-DOB-209ENST00000488325 M6PRP20645 277 aa9.44□□□□□ -0.9
HLA-DOB-209ENST00000488325 OR10J1P30954 320 aa9.44□□□□□ -0.9
HLA-DOB-209ENST00000488325 RND2P52198 227 aa9.44□□□□□ -0.9
HLA-DOB-209ENST00000488325 B2MP61769 119 aa9.44□□□□□ -0.9
HLA-DOB-209ENST00000488325 SELENOTP62341 195 aa9.44□□□□□ -0.9
HLA-DOB-209ENST00000488325 MLANAQ16655 118 aa9.44□□□□□ -0.9
HLA-DOB-209ENST00000488325 ACSM6Q6P461 480 aa9.44□□□□□ -0.9
HLA-DOB-209ENST00000488325 IL34Q6ZMJ4 242 aa9.44□□□□□ -0.9
HLA-DOB-209ENST00000488325 REC114Q7Z4M0 266 aa9.44□□□□□ -0.9
HLA-DOB-209ENST00000488325 SLC7A5P1Q8MH63 180 aa9.44□□□□□ -0.9
HLA-DOB-209ENST00000488325 TMEM86BQ8N661 226 aa9.44□□□□□ -0.9
HLA-DOB-209ENST00000488325 TMEM116Q8NCL8 245 aa9.44□□□□□ -0.9
HLA-DOB-209ENST00000488325 OR2T6Q8NHC8 308 aa9.44□□□□□ -0.9
HLA-DOB-209ENST00000488325 MRAPQ8TCY5 172 aa9.44□□□□□ -0.9
HLA-DOB-209ENST00000488325 NPIPB3Q92617 1050 aa9.44□□□□□ -0.9
HLA-DOB-209ENST00000488325 ZNF48Q96MX3 618 aaPredicted RBP9.44□□□□□ -0.9
HLA-DOB-209ENST00000488325 ACTR3CQ9C0K3 210 aaPredicted RBP9.44□□□□□ -0.9
HLA-DOB-209ENST00000488325 RFNGQ9Y644 331 aa9.44□□□□□ -0.9
HLA-DOB-209ENST00000488325 PLXNB1O43157 2135 aa9.43□□□□□ -0.9
HLA-DOB-209ENST00000488325 TCRBV4S1A1TA0A5B7 111 aa9.43□□□□□ -0.9
HLA-DOB-209ENST00000488325 SH2D7A6NKC9 451 aaPredicted RBP9.43□□□□□ -0.9
HLA-DOB-209ENST00000488325 ZFP92A6NM28 416 aa9.43□□□□□ -0.9
HLA-DOB-209ENST00000488325 I3L2K1 104 aa9.43□□□□□ -0.9
HLA-DOB-209ENST00000488325 AP4M1O00189 453 aa9.43□□□□□ -0.9
HLA-DOB-209ENST00000488325 ATP6V1G1O75348 118 aa9.43□□□□□ -0.9
HLA-DOB-209ENST00000488325 IGF1P05019 195 aa9.43□□□□□ -0.9
HLA-DOB-209ENST00000488325 FABP1P07148 127 aa9.43□□□□□ -0.9
HLA-DOB-209ENST00000488325 H2AFB1P0C5Y9 115 aa9.43□□□□□ -0.9
HLA-DOB-209ENST00000488325 KLK9Q2XQG4 91 aa9.43□□□□□ -0.9
HLA-DOB-209ENST00000488325 MIC13Q5XKP0 118 aa9.43□□□□□ -0.9
HLA-DOB-209ENST00000488325 C19orf35Q6ZS72 473 aa9.43□□□□□ -0.9
HLA-DOB-209ENST00000488325 CYP2G1PQ6ZSU1 146 aa9.43□□□□□ -0.9
HLA-DOB-209ENST00000488325 STPG3Q8N7X2 389 aa9.43□□□□□ -0.9
HLA-DOB-209ENST00000488325 OR5T1Q8NG75 326 aa9.43□□□□□ -0.9
HLA-DOB-209ENST00000488325 OR10G4Q8NGN3 311 aa9.43□□□□□ -0.9
HLA-DOB-209ENST00000488325 OR10G9Q8NGN4 311 aa9.43□□□□□ -0.9
HLA-DOB-209ENST00000488325 OR10G7Q8NGN6 311 aa9.43□□□□□ -0.9
HLA-DOB-209ENST00000488325 OR4X1Q8NH49 305 aa9.43□□□□□ -0.9
HLA-DOB-209ENST00000488325 MARC2Q969Z3 335 aa9.43□□□□□ -0.9
HLA-DOB-209ENST00000488325 TRGV9Q99603 122 aa9.43□□□□□ -0.9
HLA-DOB-209ENST00000488325 HRH4Q9H3N8 390 aa9.43□□□□□ -0.9
HLA-DOB-209ENST00000488325 RPRMQ9NS64 109 aa9.43□□□□□ -0.9
HLA-DOB-209ENST00000488325 SLC39A9Q9NUM3 307 aa9.43□□□□□ -0.9
HLA-DOB-209ENST00000488325 ZNF580Q9UK33 172 aa9.43□□□□□ -0.9
HLA-DOB-209ENST00000488325 KLK9Q9UKQ9 250 aa9.43□□□□□ -0.9
HLA-DOB-209ENST00000488325 SLC45A2Q9UMX9 530 aa9.43□□□□□ -0.9
HLA-DOB-209ENST00000488325 RYR2Q92736 4967 aa9.43□□□□□ -0.9
HLA-DOB-209ENST00000488325 TRAV30A0A087WSZ9 112 aa9.42□□□□□ -0.9
HLA-DOB-209ENST00000488325 CTXND1A0A1B0GTU2 59 aa9.42□□□□□ -0.9
HLA-DOB-209ENST00000488325 A0A1B0GUS0 222 aa9.42□□□□□ -0.9
HLA-DOB-209ENST00000488325 RAB19A4D1S5 217 aa9.42□□□□□ -0.9
HLA-DOB-209ENST00000488325 H3BUA1 57 aa9.42□□□□□ -0.9
HLA-DOB-209ENST00000488325 K7EIM0 57 aa9.42□□□□□ -0.9
HLA-DOB-209ENST00000488325 HOXA3O43365 443 aaPredicted RBP9.42□□□□□ -0.9
HLA-DOB-209ENST00000488325 NPBWR1P48145 328 aa9.42□□□□□ -0.9
HLA-DOB-209ENST00000488325 MFAP4P55083 255 aa9.42□□□□□ -0.9
HLA-DOB-209ENST00000488325 PRR20EP86478 221 aa9.42□□□□□ -0.9
HLA-DOB-209ENST00000488325 PRR20CP86479 221 aa9.42□□□□□ -0.9
HLA-DOB-209ENST00000488325 PRR20DP86480 221 aa9.42□□□□□ -0.9
HLA-DOB-209ENST00000488325 PRR20BP86481 221 aa9.42□□□□□ -0.9
HLA-DOB-209ENST00000488325 PRR20AP86496 221 aa9.42□□□□□ -0.9
HLA-DOB-209ENST00000488325 KPRPQ5T749 579 aaPredicted RBP9.42□□□□□ -0.9
HLA-DOB-209ENST00000488325 LYPD6BQ8NI32 183 aa9.42□□□□□ -0.9
HLA-DOB-209ENST00000488325 FANCD2OSQ96PS1 177 aa9.42□□□□□ -0.9
HLA-DOB-209ENST00000488325 RNF2Q99496 336 aa9.42□□□□□ -0.9
HLA-DOB-209ENST00000488325 NPFFR1Q9GZQ6 430 aa9.42□□□□□ -0.9
HLA-DOB-209ENST00000488325 TNFRSF19Q9NS68 423 aa9.42□□□□□ -0.9
HLA-DOB-209ENST00000488325 ZNF355PQ9NSJ1 428 aa9.42□□□□□ -0.9
HLA-DOB-209ENST00000488325 DMRT1Q9Y5R6 373 aa9.42□□□□□ -0.9
HLA-DOB-209ENST00000488325 TRAV1-1A0A0B4J248 108 aa9.41□□□□□ -0.9
HLA-DOB-209ENST00000488325 A0A1W2PPV4 95 aa9.41□□□□□ -0.9
HLA-DOB-209ENST00000488325 CLDN34H7C241 214 aa9.41□□□□□ -0.9
HLA-DOB-209ENST00000488325 CLN5O75503 358 aa9.41□□□□□ -0.9
HLA-DOB-209ENST00000488325 S100A1P23297 94 aa9.41□□□□□ -0.9
HLA-DOB-209ENST00000488325 FHITP49789 147 aa9.41□□□□□ -0.9
HLA-DOB-209ENST00000488325 FAM122CQ6P4D5 195 aa9.41□□□□□ -0.9
HLA-DOB-209ENST00000488325 BPIFCQ8NFQ6 507 aa9.41□□□□□ -0.9
HLA-DOB-209ENST00000488325 VN1R17PQ8TDU5 208 aa9.41□□□□□ -0.9
HLA-DOB-209ENST00000488325 MBD3L1Q8WWY6 194 aa9.41□□□□□ -0.9
HLA-DOB-209ENST00000488325 RCC1LQ96I51 464 aaKnown RBP9.41□□□□□ -0.9
HLA-DOB-209ENST00000488325 TXN2Q99757 166 aa9.41□□□□□ -0.9
HLA-DOB-209ENST00000488325 PRSS22Q9GZN4 317 aa9.41□□□□□ -0.9
HLA-DOB-209ENST00000488325 VSIRQ9H7M9 311 aa9.41□□□□□ -0.9
HLA-DOB-209ENST00000488325 GAR1Q9NY12 217 aaKnown RBP9.41□□□□□ -0.9
HLA-DOB-209ENST00000488325 C21orf62Q9NYP8 219 aa9.41□□□□□ -0.9
HLA-DOB-209ENST00000488325 FBXL7Q9UJT9 491 aa9.41□□□□□ -0.9
HLA-DOB-209ENST00000488325 IGKV1OR2-108A0A075B7D4 117 aa9.4□□□□□ -0.9
HLA-DOB-209ENST00000488325 IGHV3-21A0A0B4J1V1 117 aa9.4□□□□□ -0.9
HLA-DOB-209ENST00000488325 MAP1LC3B2A6NCE7 125 aa9.4□□□□□ -0.9
HLA-DOB-209ENST00000488325 MFSD2BA6NFX1 497 aa9.4□□□□□ -0.9
HLA-DOB-209ENST00000488325 FAM223BA6NKX1 122 aa9.4□□□□□ -0.9
HLA-DOB-209ENST00000488325 LINC01548A6NM66 108 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms