RNA–Protein interactions for RNA: ENST00000488228.1

UBE4B-210, Transcript of ubiquitination factor E4B, humanhuman

TSL 3

Gene UBE4B, Length 560 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-210ENST00000488228 KPRPQ5T749 579 aaPredicted RBP8.4□□□□□ -1.06
UBE4B-210ENST00000488228 ETFRF1Q6IPR1 90 aa8.4□□□□□ -1.06
UBE4B-210ENST00000488228 TMEM14EPQ6UXP3 125 aa8.4□□□□□ -1.06
UBE4B-210ENST00000488228 OR11H7Q8NGC8 314 aa8.4□□□□□ -1.06
UBE4B-210ENST00000488228 NPIPB3Q92617 1050 aa8.4□□□□□ -1.06
UBE4B-210ENST00000488228 ELOVL1Q9BW60 279 aa8.4□□□□□ -1.06
UBE4B-210ENST00000488228 GPR61Q9BZJ8 451 aa8.4□□□□□ -1.06
UBE4B-210ENST00000488228 NMES1Q9C002 83 aa8.4□□□□□ -1.06
UBE4B-210ENST00000488228 MED28Q9H204 178 aa8.4□□□□□ -1.06
UBE4B-210ENST00000488228 OR5AC2Q9NZP5 309 aa8.4□□□□□ -1.06
UBE4B-210ENST00000488228 PRKDCP78527 4128 aaKnown RBP8.39□□□□□ -1.07
UBE4B-210ENST00000488228 IGSF23A1L1A6 192 aa8.39□□□□□ -1.07
UBE4B-210ENST00000488228 PMS2P5A8MQ11 134 aa8.39□□□□□ -1.07
UBE4B-210ENST00000488228 NDUFA4O00483 81 aa8.39□□□□□ -1.07
UBE4B-210ENST00000488228 WIPF1O43516 503 aa8.39□□□□□ -1.07
UBE4B-210ENST00000488228 YIF1AO95070 293 aa8.39□□□□□ -1.07
UBE4B-210ENST00000488228 PVALBP20472 110 aaPredicted RBP8.39□□□□□ -1.07
UBE4B-210ENST00000488228 GPX4P36969 197 aaPredicted RBP8.39□□□□□ -1.07
UBE4B-210ENST00000488228 BCAP31P51572 246 aa8.39□□□□□ -1.07
UBE4B-210ENST00000488228 TAS2R30P59541 319 aa8.39□□□□□ -1.07
UBE4B-210ENST00000488228 RRAS2P62070 204 aaPredicted RBP8.39□□□□□ -1.07
UBE4B-210ENST00000488228 AKR1C1Q04828 323 aa8.39□□□□□ -1.07
UBE4B-210ENST00000488228 GAMTQ14353 236 aa8.39□□□□□ -1.07
UBE4B-210ENST00000488228 TMEM116Q8NCL8 245 aa8.39□□□□□ -1.07
UBE4B-210ENST00000488228 OR1S2Q8NGQ3 325 aa8.39□□□□□ -1.07
UBE4B-210ENST00000488228 PPP1R1CQ8WVI7 109 aa8.39□□□□□ -1.07
UBE4B-210ENST00000488228 ZFAND3Q9H8U3 227 aa8.39□□□□□ -1.07
UBE4B-210ENST00000488228 PUS1Q9Y606 427 aaKnown RBP eCLIP8.39□□□□□ -1.07
UBE4B-210ENST00000488228 IGKV1D-37A0A075B6S9 117 aa8.38□□□□□ -1.07
UBE4B-210ENST00000488228 IGKV1OR2-108A0A075B7D4 117 aa8.38□□□□□ -1.07
UBE4B-210ENST00000488228 IGHV3-49A0A0A0MS15 119 aa8.38□□□□□ -1.07
UBE4B-210ENST00000488228 SMCO3A2RU48 225 aa8.38□□□□□ -1.07
UBE4B-210ENST00000488228 FAM24AA6NFZ4 105 aa8.38□□□□□ -1.07
UBE4B-210ENST00000488228 H0YIZ8 118 aa8.38□□□□□ -1.07
UBE4B-210ENST00000488228 SCGB2A1O75556 95 aa8.38□□□□□ -1.07
UBE4B-210ENST00000488228 DEDDO75618 318 aa8.38□□□□□ -1.07
UBE4B-210ENST00000488228 CST7O76096 145 aa8.38□□□□□ -1.07
UBE4B-210ENST00000488228 FOLR2P14207 255 aa8.38□□□□□ -1.07
UBE4B-210ENST00000488228 EGFEM1PQ0D2K5 195 aa8.38□□□□□ -1.07
UBE4B-210ENST00000488228 ARL16Q0P5N6 197 aa8.38□□□□□ -1.07
UBE4B-210ENST00000488228 TOMM20LQ6UXN7 152 aa8.38□□□□□ -1.07
UBE4B-210ENST00000488228 ZNF600Q6ZNG1 722 aa8.38□□□□□ -1.07
UBE4B-210ENST00000488228 DYNLRB2Q8TF09 96 aa8.38□□□□□ -1.07
UBE4B-210ENST00000488228 DAZ1Q9NQZ3 744 aaKnown RBP8.38□□□□□ -1.07
UBE4B-210ENST00000488228 LYRM2Q9NU23 88 aaPredicted RBP8.38□□□□□ -1.07
UBE4B-210ENST00000488228 UFC1Q9Y3C8 167 aa8.38□□□□□ -1.07
UBE4B-210ENST00000488228 IGHV3OR16-13A0A075B7E8 117 aa8.37□□□□□ -1.07
UBE4B-210ENST00000488228 TRAV30A0A087WSZ9 112 aa8.37□□□□□ -1.07
UBE4B-210ENST00000488228 IGHV3-74A0A0B4J1X5 117 aa8.37□□□□□ -1.07
UBE4B-210ENST00000488228 ZFP92A6NM28 416 aa8.37□□□□□ -1.07
UBE4B-210ENST00000488228 IGLV1-51P01701 117 aa8.37□□□□□ -1.07
UBE4B-210ENST00000488228 CBLN1P23435 193 aa8.37□□□□□ -1.07
UBE4B-210ENST00000488228 INSL3P51460 131 aa8.37□□□□□ -1.07
UBE4B-210ENST00000488228 CYCSP99999 105 aaKnown RBP8.37□□□□□ -1.07
UBE4B-210ENST00000488228 SLC38A11Q08AI6 406 aa8.37□□□□□ -1.07
UBE4B-210ENST00000488228 BTNL8Q6UX41 500 aa8.37□□□□□ -1.07
UBE4B-210ENST00000488228 TMEM217Q8N7C4 229 aa8.37□□□□□ -1.07
UBE4B-210ENST00000488228 PRR25Q96S07 402 aa8.37□□□□□ -1.07
UBE4B-210ENST00000488228 AURKAIP1Q9NWT8 199 aaPredicted RBP8.37□□□□□ -1.07
UBE4B-210ENST00000488228 MBD2Q9UBB5 411 aa8.37□□□□□ -1.07
UBE4B-210ENST00000488228 MLXQ9UH92 298 aa8.37□□□□□ -1.07
UBE4B-210ENST00000488228 IZUMO1RA6ND01 250 aa8.36□□□□□ -1.07
UBE4B-210ENST00000488228 SCAF4O95104 1147 aaKnown RBP8.36□□□□□ -1.07
UBE4B-210ENST00000488228 MPC2O95563 127 aa8.36□□□□□ -1.07
UBE4B-210ENST00000488228 ELLP55199 621 aaPredicted RBP8.36□□□□□ -1.07
UBE4B-210ENST00000488228 DLK1P80370 383 aa8.36□□□□□ -1.07
UBE4B-210ENST00000488228 DEFA6Q01524 100 aa8.36□□□□□ -1.07
UBE4B-210ENST00000488228 ZNF90Q03938 601 aa8.36□□□□□ -1.07
UBE4B-210ENST00000488228 OR2F1Q13607 317 aa8.36□□□□□ -1.07
UBE4B-210ENST00000488228 STX12Q86Y82 276 aa8.36□□□□□ -1.07
UBE4B-210ENST00000488228 TMEM252Q8N6L7 170 aa8.36□□□□□ -1.07
UBE4B-210ENST00000488228 THAP8Q8NA92 274 aa8.36□□□□□ -1.07
UBE4B-210ENST00000488228 OR10P1Q8NGE3 313 aa8.36□□□□□ -1.07
UBE4B-210ENST00000488228 TRAV14DV4A0A0A6YYC5 116 aa8.35□□□□□ -1.07
UBE4B-210ENST00000488228 IGHV3-66A0A0C4DH42 116 aa8.35□□□□□ -1.07
UBE4B-210ENST00000488228 IGHV7-4-1A0A0J9YVY3 117 aa8.35□□□□□ -1.07
UBE4B-210ENST00000488228 UBE2L5PA0A1B0GUS4 154 aa8.35□□□□□ -1.07
UBE4B-210ENST00000488228 E5RGE8 158 aa8.35□□□□□ -1.07
UBE4B-210ENST00000488228 TOMM40O96008 361 aa8.35□□□□□ -1.07
UBE4B-210ENST00000488228 IL4P05112 153 aa8.35□□□□□ -1.07
UBE4B-210ENST00000488228 PET100P0DJ07 73 aa8.35□□□□□ -1.07
UBE4B-210ENST00000488228 PSG1P11464 419 aa8.35□□□□□ -1.07
UBE4B-210ENST00000488228 SULT1A1P50225 295 aa8.35□□□□□ -1.07
UBE4B-210ENST00000488228 YPEL3P61236 119 aaPredicted RBP8.35□□□□□ -1.07
UBE4B-210ENST00000488228 EWSR1Q01844 656 aaKnown RBP eCLIP8.35□□□□□ -1.07
UBE4B-210ENST00000488228 USF2Q15853 346 aaPredicted RBP8.35□□□□□ -1.07
UBE4B-210ENST00000488228 CD300EQ496F6 205 aaPredicted RBP8.35□□□□□ -1.07
UBE4B-210ENST00000488228 TMEM61Q8N0U2 210 aa8.35□□□□□ -1.07
UBE4B-210ENST00000488228 GINS3Q9BRX5 216 aa8.35□□□□□ -1.07
UBE4B-210ENST00000488228 SIGLEC8Q9NYZ4 499 aa8.35□□□□□ -1.07
UBE4B-210ENST00000488228 ZNF256Q9Y2P7 627 aaPredicted RBP8.35□□□□□ -1.07
UBE4B-210ENST00000488228 WI2-2373I1.2A0A1W2PRP0 233 aa8.34□□□□□ -1.07
UBE4B-210ENST00000488228 K7EMT4 169 aa8.34□□□□□ -1.07
UBE4B-210ENST00000488228 APOHP02749 345 aaPredicted RBP8.34□□□□□ -1.07
UBE4B-210ENST00000488228 RLN2P04090 185 aa8.34□□□□□ -1.07
UBE4B-210ENST00000488228 GIPP09681 153 aaPredicted RBP8.34□□□□□ -1.07
UBE4B-210ENST00000488228 RD3LP0DJH9 198 aa8.34□□□□□ -1.07
UBE4B-210ENST00000488228 C8orf88P0DMB2 117 aa8.34□□□□□ -1.07
UBE4B-210ENST00000488228 GATA2P23769 480 aaPredicted RBP8.34□□□□□ -1.07
UBE4B-210ENST00000488228 P2RY1P47900 373 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms