RNA–Protein interactions for RNA: ENST00000488035.5

R3HDM1-219, Transcript of R3H domain containing 1, humanhuman

TSL 3

Gene R3HDM1, Length 502 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-219ENST00000488035 RBP1P09455 135 aa0.58□□□□□ -2.32
R3HDM1-219ENST00000488035 SRIP30626 198 aa0.58□□□□□ -2.32
R3HDM1-219ENST00000488035 CDKN2CP42773 168 aa0.58□□□□□ -2.32
R3HDM1-219ENST00000488035 SPANXN5Q5MJ07 72 aa0.58□□□□□ -2.32
R3HDM1-219ENST00000488035 KRT222Q8N1A0 295 aa0.58□□□□□ -2.32
R3HDM1-219ENST00000488035 GDPD1Q8N9F7 314 aa0.58□□□□□ -2.32
R3HDM1-219ENST00000488035 SLC25A40Q8TBP6 338 aa0.58□□□□□ -2.32
R3HDM1-219ENST00000488035 CT55Q8WUE5 264 aa0.58□□□□□ -2.32
R3HDM1-219ENST00000488035 PPP1R14BQ96C90 147 aa0.58□□□□□ -2.32
R3HDM1-219ENST00000488035 GPR146Q96CH1 333 aa0.58□□□□□ -2.32
R3HDM1-219ENST00000488035 OR51V1Q9H2C8 321 aa0.58□□□□□ -2.32
R3HDM1-219ENST00000488035 UCK1Q9HA47 277 aa0.58□□□□□ -2.32
R3HDM1-219ENST00000488035 TAS2R4Q9NYW5 299 aa0.58□□□□□ -2.32
R3HDM1-219ENST00000488035 A0A087WX48 190 aa0.57□□□□□ -2.32
R3HDM1-219ENST00000488035 IGKV1-9A0A0C4DH69 117 aa0.57□□□□□ -2.32
R3HDM1-219ENST00000488035 OR4E1P0C645 316 aa0.57□□□□□ -2.32
R3HDM1-219ENST00000488035 S100A4P26447 101 aaKnown RBP0.57□□□□□ -2.32
R3HDM1-219ENST00000488035 CEBPGP53567 150 aa0.57□□□□□ -2.32
R3HDM1-219ENST00000488035 ZNF418Q8TF45 676 aaPredicted RBP0.57□□□□□ -2.32
R3HDM1-219ENST00000488035 BORCS7Q96B45 105 aa0.57□□□□□ -2.32
R3HDM1-219ENST00000488035 PRAP1Q96NZ9 151 aa0.57□□□□□ -2.32
R3HDM1-219ENST00000488035 CCDC90BQ9GZT6 254 aa0.57□□□□□ -2.32
R3HDM1-219ENST00000488035 MIXL1Q9H2W2 232 aa0.57□□□□□ -2.32
R3HDM1-219ENST00000488035 KLK9Q9UKQ9 250 aa0.57□□□□□ -2.32
R3HDM1-219ENST00000488035 MYO3BQ8WXR4 1341 aa0.57□□□□□ -2.32
R3HDM1-219ENST00000488035 PIK3C2GO75747 1445 aa0.56□□□□□ -2.32
R3HDM1-219ENST00000488035 TRAV12-1A0A0B4J245 112 aa0.56□□□□□ -2.32
R3HDM1-219ENST00000488035 CLDN25C9JDP6 229 aa0.56□□□□□ -2.32
R3HDM1-219ENST00000488035 SULT1B1O43704 296 aa0.56□□□□□ -2.32
R3HDM1-219ENST00000488035 HYPMO75409 117 aa0.56□□□□□ -2.32
R3HDM1-219ENST00000488035 HAND1O96004 215 aa0.56□□□□□ -2.32
R3HDM1-219ENST00000488035 SERPINE1P05121 402 aa0.56□□□□□ -2.32
R3HDM1-219ENST00000488035 BAALC-AS2P0C853 105 aa0.56□□□□□ -2.32
R3HDM1-219ENST00000488035 CASP1P29466 404 aa0.56□□□□□ -2.32
R3HDM1-219ENST00000488035 RHOGP84095 191 aa0.56□□□□□ -2.32
R3HDM1-219ENST00000488035 SRSF6Q13247 344 aaKnown RBP0.56□□□□□ -2.32
R3HDM1-219ENST00000488035 EDDM3AQ14507 147 aa0.56□□□□□ -2.32
R3HDM1-219ENST00000488035 RGS21Q2M5E4 152 aa0.56□□□□□ -2.32
R3HDM1-219ENST00000488035 LCA10Q71F78 164 aa0.56□□□□□ -2.32
R3HDM1-219ENST00000488035 TRAPPC6BQ86SZ2 158 aa0.56□□□□□ -2.32
R3HDM1-219ENST00000488035 OR52L1Q8NGH7 329 aa0.56□□□□□ -2.32
R3HDM1-219ENST00000488035 OR51A2Q8NGJ7 313 aa0.56□□□□□ -2.32
R3HDM1-219ENST00000488035 OR8D4Q8NGM9 314 aa0.56□□□□□ -2.32
R3HDM1-219ENST00000488035 OR10J5Q8NHC4 309 aa0.56□□□□□ -2.32
R3HDM1-219ENST00000488035 SFT2D1Q8WV19 159 aa0.56□□□□□ -2.32
R3HDM1-219ENST00000488035 CMSS1Q9BQ75 279 aaKnown RBP0.56□□□□□ -2.32
R3HDM1-219ENST00000488035 GLTPQ9NZD2 209 aa0.56□□□□□ -2.32
R3HDM1-219ENST00000488035 EPDR1Q9UM22 224 aa0.56□□□□□ -2.32
R3HDM1-219ENST00000488035 UTP11Q9Y3A2 253 aaKnown RBP0.56□□□□□ -2.32
R3HDM1-219ENST00000488035 MCM3APO60318 1980 aa0.56□□□□□ -2.32
R3HDM1-219ENST00000488035 EML5Q05BV3 1969 aa0.56□□□□□ -2.32
R3HDM1-219ENST00000488035 SCN8AQ9UQD0 1980 aa0.56□□□□□ -2.32
R3HDM1-219ENST00000488035 MED1Q15648 1581 aaPredicted RBP0.55□□□□□ -2.32
R3HDM1-219ENST00000488035 A0A087X0T9 212 aa0.55□□□□□ -2.32
R3HDM1-219ENST00000488035 TMEM114B3SHH9 223 aa0.55□□□□□ -2.32
R3HDM1-219ENST00000488035 PDE6DO43924 150 aa0.55□□□□□ -2.32
R3HDM1-219ENST00000488035 OR2B3O76000 313 aa0.55□□□□□ -2.32
R3HDM1-219ENST00000488035 C8GP07360 202 aa0.55□□□□□ -2.32
R3HDM1-219ENST00000488035 SERPINB9P50453 376 aa0.55□□□□□ -2.32
R3HDM1-219ENST00000488035 DEFB115Q30KQ5 88 aa0.55□□□□□ -2.32
R3HDM1-219ENST00000488035 TMEM97Q5BJF2 176 aa0.55□□□□□ -2.32
R3HDM1-219ENST00000488035 BRMS1LQ5PSV4 323 aa0.55□□□□□ -2.32
R3HDM1-219ENST00000488035 Q6Q795 121 aa0.55□□□□□ -2.32
R3HDM1-219ENST00000488035 Q8IYB0 196 aa0.55□□□□□ -2.32
R3HDM1-219ENST00000488035 CLECL1Q8IZS7 167 aa0.55□□□□□ -2.32
R3HDM1-219ENST00000488035 OR6V1Q8N148 313 aa0.55□□□□□ -2.32
R3HDM1-219ENST00000488035 C3orf56Q8N813 242 aa0.55□□□□□ -2.32
R3HDM1-219ENST00000488035 Q8N814 137 aa0.55□□□□□ -2.32
R3HDM1-219ENST00000488035 TRIM4Q9C037 500 aa0.55□□□□□ -2.32
R3HDM1-219ENST00000488035 TMEM133Q9H2Q1 129 aa0.55□□□□□ -2.32
R3HDM1-219ENST00000488035 ACER3Q9NUN7 267 aa0.55□□□□□ -2.32
R3HDM1-219ENST00000488035 FBXO5Q9UKT4 447 aa0.55□□□□□ -2.32
R3HDM1-219ENST00000488035 FBN2P35556 2912 aa0.55□□□□□ -2.32
R3HDM1-219ENST00000488035 SBF1O95248 1867 aa0.54□□□□□ -2.32
R3HDM1-219ENST00000488035 MYH7BA7E2Y1 1941 aa0.54□□□□□ -2.32
R3HDM1-219ENST00000488035 DENND4CQ5VZ89 1909 aa0.54□□□□□ -2.32
R3HDM1-219ENST00000488035 SNRNP200O75643 2136 aaKnown RBP0.54□□□□□ -2.32
R3HDM1-219ENST00000488035 PPIBP23284 216 aaKnown RBP0.54□□□□□ -2.32
R3HDM1-219ENST00000488035 RNASE4P34096 147 aaKnown RBP0.54□□□□□ -2.32
R3HDM1-219ENST00000488035 YPEL3P61236 119 aaPredicted RBP0.54□□□□□ -2.32
R3HDM1-219ENST00000488035 ERVS71-1P61550 626 aa0.54□□□□□ -2.32
R3HDM1-219ENST00000488035 HIST1H3AP68431 136 aa0.54□□□□□ -2.32
R3HDM1-219ENST00000488035 CCL7P80098 99 aa0.54□□□□□ -2.32
R3HDM1-219ENST00000488035 H3F3AP84243 136 aa0.54□□□□□ -2.32
R3HDM1-219ENST00000488035 TSNQ15631 228 aaKnown RBP0.54□□□□□ -2.32
R3HDM1-219ENST00000488035 ESRGQ1W209 222 aa0.54□□□□□ -2.32
R3HDM1-219ENST00000488035 C1orf137Q5JT78 98 aa0.54□□□□□ -2.32
R3HDM1-219ENST00000488035 STAG3L4Q8TBR4 150 aa0.54□□□□□ -2.32
R3HDM1-219ENST00000488035 C2orf50Q96LR7 162 aa0.54□□□□□ -2.32
R3HDM1-219ENST00000488035 HIST1H2BLQ99880 126 aa0.54□□□□□ -2.32
R3HDM1-219ENST00000488035 SLC22A13Q9Y226 551 aa0.54□□□□□ -2.32
R3HDM1-219ENST00000488035 HS3ST2Q9Y278 367 aa0.54□□□□□ -2.32
R3HDM1-219ENST00000488035 SLC35A3Q9Y2D2 325 aa0.54□□□□□ -2.32
R3HDM1-219ENST00000488035 NOTCH1P46531 2555 aa0.54□□□□□ -2.32
R3HDM1-219ENST00000488035 ZNF469Q96JG9 3925 aaPredicted RBP0.54□□□□□ -2.32
R3HDM1-219ENST00000488035 ARHGEF28Q8N1W1 1705 aaKnown RBP0.53□□□□□ -2.32
R3HDM1-219ENST00000488035 CCDC160A6NGH7 325 aa0.53□□□□□ -2.32
R3HDM1-219ENST00000488035 M0R2N4 97 aa0.53□□□□□ -2.32
R3HDM1-219ENST00000488035 CTXN2P0C2S0 81 aa0.53□□□□□ -2.32
R3HDM1-219ENST00000488035 ZNF25P17030 456 aaPredicted RBP0.53□□□□□ -2.32
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms