RNA–Protein interactions for RNA: ENST00000487698.5

SF3B1-211, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SF3B1, Length 2,127 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-211ENST00000487698 MXRA5Q9NR99 2828 aa7.42□□□□□ -1.22
SF3B1-211ENST00000487698 LINC01548A6NM66 108 aa7.42□□□□□ -1.22
SF3B1-211ENST00000487698 F8W036 122 aa7.42□□□□□ -1.22
SF3B1-211ENST00000487698 APOC3P02656 99 aa7.42□□□□□ -1.22
SF3B1-211ENST00000487698 HSPB1P04792 205 aaKnown RBP7.42□□□□□ -1.22
SF3B1-211ENST00000487698 OR5G3P0C626 314 aa7.42□□□□□ -1.22
SF3B1-211ENST00000487698 IGLC1P0CG04 106 aa7.42□□□□□ -1.22
SF3B1-211ENST00000487698 DEFB112Q30KQ8 113 aa7.42□□□□□ -1.22
SF3B1-211ENST00000487698 SPATA31B1PQ5VZV4 182 aa7.42□□□□□ -1.22
SF3B1-211ENST00000487698 NANPQ8TBE9 248 aa7.42□□□□□ -1.22
SF3B1-211ENST00000487698 ZNF48Q96MX3 618 aaPredicted RBP7.42□□□□□ -1.22
SF3B1-211ENST00000487698 TNFRSF19Q9NS68 423 aa7.42□□□□□ -1.22
SF3B1-211ENST00000487698 FUT9Q9Y231 359 aa7.42□□□□□ -1.22
SF3B1-211ENST00000487698 M0QZK8 103 aa7.41□□□□□ -1.22
SF3B1-211ENST00000487698 IFNA1P01562 189 aa7.41□□□□□ -1.22
SF3B1-211ENST00000487698 SRP19P09132 144 aaKnown RBP7.41□□□□□ -1.22
SF3B1-211ENST00000487698 ARL14EPLP0DKL9 152 aa7.41□□□□□ -1.22
SF3B1-211ENST00000487698 LY6EQ16553 131 aa7.41□□□□□ -1.22
SF3B1-211ENST00000487698 GUCA2BQ16661 112 aa7.41□□□□□ -1.22
SF3B1-211ENST00000487698 AKIRIN2Q53H80 203 aa7.41□□□□□ -1.22
SF3B1-211ENST00000487698 UNQ5815/PRO19632Q6UWF5 114 aa7.41□□□□□ -1.22
SF3B1-211ENST00000487698 C16orf82Q7Z2V1 217 aa7.41□□□□□ -1.22
SF3B1-211ENST00000487698 TMEM37Q8WXS4 190 aa7.41□□□□□ -1.22
SF3B1-211ENST00000487698 TMEM68Q96MH6 324 aa7.41□□□□□ -1.22
SF3B1-211ENST00000487698 SLC35B3Q9H1N7 401 aa7.41□□□□□ -1.22
SF3B1-211ENST00000487698 PITPNC1Q9UKF7 332 aa7.41□□□□□ -1.22
SF3B1-211ENST00000487698 AKAP9Q99996 3911 aa7.41□□□□□ -1.22
SF3B1-211ENST00000487698 CLN5O75503 358 aa7.4□□□□□ -1.22
SF3B1-211ENST00000487698 IGKV1-17P01599 117 aa7.4□□□□□ -1.22
SF3B1-211ENST00000487698 PSMB3P49720 205 aa7.4□□□□□ -1.22
SF3B1-211ENST00000487698 ECSCRQ19T08 205 aa7.4□□□□□ -1.22
SF3B1-211ENST00000487698 FAM78BQ5VT40 261 aa7.4□□□□□ -1.22
SF3B1-211ENST00000487698 SPNS3Q6ZMD2 512 aa7.4□□□□□ -1.22
SF3B1-211ENST00000487698 SLC35E3Q7Z769 313 aa7.4□□□□□ -1.22
SF3B1-211ENST00000487698 OR5T1Q8NG75 326 aa7.4□□□□□ -1.22
SF3B1-211ENST00000487698 RXFP4Q8TDU9 374 aa7.4□□□□□ -1.22
SF3B1-211ENST00000487698 GATAD1Q8WUU5 269 aa7.4□□□□□ -1.22
SF3B1-211ENST00000487698 TMUB1Q9BVT8 246 aa7.4□□□□□ -1.22
SF3B1-211ENST00000487698 MANBALQ9NQG1 85 aa7.4□□□□□ -1.22
SF3B1-211ENST00000487698 VAX2Q9UIW0 290 aa7.4□□□□□ -1.22
SF3B1-211ENST00000487698 F8W735 103 aaPredicted RBP7.4□□□□□ -1.23
SF3B1-211ENST00000487698 G3V318 75 aa7.4□□□□□ -1.23
SF3B1-211ENST00000487698 CXorf1O96002 111 aa7.4□□□□□ -1.23
SF3B1-211ENST00000487698 HIST1H1BP16401 226 aaKnown RBP7.4□□□□□ -1.23
SF3B1-211ENST00000487698 IER3P46695 156 aa7.4□□□□□ -1.23
SF3B1-211ENST00000487698 PLP1P60201 277 aa7.4□□□□□ -1.23
SF3B1-211ENST00000487698 PATE2Q6UY27 113 aa7.4□□□□□ -1.23
SF3B1-211ENST00000487698 RBMS3Q6XE24 437 aaKnown RBP7.4□□□□□ -1.23
SF3B1-211ENST00000487698 MIR17HGQ75NE6 70 aa7.4□□□□□ -1.23
SF3B1-211ENST00000487698 PFDN5Q99471 154 aa7.4□□□□□ -1.23
SF3B1-211ENST00000487698 MRPL32Q9BYC8 188 aaKnown RBP7.4□□□□□ -1.23
SF3B1-211ENST00000487698 GSX1Q9H4S2 264 aaPredicted RBP7.4□□□□□ -1.23
SF3B1-211ENST00000487698 TRBV9A0A0B4J1U6 114 aa7.39□□□□□ -1.23
SF3B1-211ENST00000487698 NDUFS6O75380 124 aaKnown RBP7.39□□□□□ -1.23
SF3B1-211ENST00000487698 NDUFB8O95169 186 aa7.39□□□□□ -1.23
SF3B1-211ENST00000487698 IGHV4-59P01825 116 aa7.39□□□□□ -1.23
SF3B1-211ENST00000487698 IGHG2P01859 326 aa7.39□□□□□ -1.23
SF3B1-211ENST00000487698 IGF1P05019 195 aa7.39□□□□□ -1.23
SF3B1-211ENST00000487698 TAGLN2P37802 199 aaKnown RBP7.39□□□□□ -1.23
SF3B1-211ENST00000487698 MEF2BQ02080 365 aaPredicted RBP7.39□□□□□ -1.23
SF3B1-211ENST00000487698 SVBPQ8N300 66 aa7.39□□□□□ -1.23
SF3B1-211ENST00000487698 OR1L4Q8NGR5 311 aa7.39□□□□□ -1.23
SF3B1-211ENST00000487698 RNF2Q99496 336 aa7.39□□□□□ -1.23
SF3B1-211ENST00000487698 PRDM13Q9H4Q3 707 aa7.39□□□□□ -1.23
SF3B1-211ENST00000487698 DNAJC4Q9NNZ3 241 aa7.39□□□□□ -1.23
SF3B1-211ENST00000487698 THYN1Q9P016 225 aa7.39□□□□□ -1.23
SF3B1-211ENST00000487698 MYO9AB2RTY4 2548 aa7.39□□□□□ -1.23
SF3B1-211ENST00000487698 COX7A2P2O60397 106 aa7.39□□□□□ -1.23
SF3B1-211ENST00000487698 SCO1O75880 301 aa7.39□□□□□ -1.23
SF3B1-211ENST00000487698 OR2J3O76001 311 aa7.39□□□□□ -1.23
SF3B1-211ENST00000487698 GCHFRP30047 84 aa7.39□□□□□ -1.23
SF3B1-211ENST00000487698 FCGR2BP31994 310 aaPredicted RBP7.39□□□□□ -1.23
SF3B1-211ENST00000487698 CD81P60033 236 aa7.39□□□□□ -1.23
SF3B1-211ENST00000487698 DEFA5Q01523 94 aa7.39□□□□□ -1.23
SF3B1-211ENST00000487698 KRTAP1-1Q07627 177 aa7.39□□□□□ -1.23
SF3B1-211ENST00000487698 TIGITQ495A1 244 aa7.39□□□□□ -1.23
SF3B1-211ENST00000487698 MORN5Q5VZ52 161 aa7.39□□□□□ -1.23
SF3B1-211ENST00000487698 ATRAIDQ6UW56 229 aa7.39□□□□□ -1.23
SF3B1-211ENST00000487698 CYB561D1Q8N8Q1 229 aa7.39□□□□□ -1.23
SF3B1-211ENST00000487698 ZNF503Q96F45 646 aa7.39□□□□□ -1.23
SF3B1-211ENST00000487698 TECRQ9NZ01 308 aaKnown RBP7.39□□□□□ -1.23
SF3B1-211ENST00000487698 ACANP16112 2415 aa7.39□□□□□ -1.23
SF3B1-211ENST00000487698 SONP18583 2426 aaKnown RBP7.38□□□□□ -1.23
SF3B1-211ENST00000487698 ELOA3CA0A087WX78 387 aaPredicted RBP7.38□□□□□ -1.23
SF3B1-211ENST00000487698 TRAV41A0A0B4J266 112 aa7.38□□□□□ -1.23
SF3B1-211ENST00000487698 PAGE4O60829 102 aa7.38□□□□□ -1.23
SF3B1-211ENST00000487698 PSG1P11464 419 aa7.38□□□□□ -1.23
SF3B1-211ENST00000487698 NPBWR1P48145 328 aa7.38□□□□□ -1.23
SF3B1-211ENST00000487698 MFAP4P55083 255 aa7.38□□□□□ -1.23
SF3B1-211ENST00000487698 C10orf113Q5VZT2 155 aa7.38□□□□□ -1.23
SF3B1-211ENST00000487698 Q6YL49 198 aa7.38□□□□□ -1.23
SF3B1-211ENST00000487698 IQCF2Q8IXL9 164 aa7.38□□□□□ -1.23
SF3B1-211ENST00000487698 OR5R1Q8NH85 324 aa7.38□□□□□ -1.23
SF3B1-211ENST00000487698 VN1R17PQ8TDU5 208 aa7.38□□□□□ -1.23
SF3B1-211ENST00000487698 FAM167A-AS1Q96KT0 104 aa7.38□□□□□ -1.23
SF3B1-211ENST00000487698 SLC25A2Q9BXI2 301 aa7.38□□□□□ -1.23
SF3B1-211ENST00000487698 C21orf62Q9NYP8 219 aa7.38□□□□□ -1.23
SF3B1-211ENST00000487698 DOK5Q9P104 306 aa7.38□□□□□ -1.23
SF3B1-211ENST00000487698 FBXL7Q9UJT9 491 aa7.38□□□□□ -1.23
SF3B1-211ENST00000487698 S4R3C0 116 aa7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms